RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 PRRC2CQ9Y520 2896 aaKnown RBP1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 ITPR2Q14571 2701 aa1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 NIPBLQ6KC79 2804 aaeCLIP1.44□□□□□ -2.18
SOX2-OT-219ENST00000593330 USF3Q68DE3 2245 aa1.43□□□□□ -2.18
SOX2-OT-219ENST00000593330 RPL39P5Q59GN2 51 aa1.43□□□□□ -2.18
SOX2-OT-219ENST00000593330 MYO15AQ9UKN7 3530 aa1.43□□□□□ -2.18
SOX2-OT-219ENST00000593330 APCP25054 2843 aa1.43□□□□□ -2.18
SOX2-OT-219ENST00000593330 DMXL1Q9Y485 3027 aa1.42□□□□□ -2.18
SOX2-OT-219ENST00000593330 PKDREJQ9NTG1 2253 aa1.41□□□□□ -2.18
SOX2-OT-219ENST00000593330 DEFB108AA8MXU0 73 aa1.41□□□□□ -2.18
SOX2-OT-219ENST00000593330 S4R3F8 94 aa1.4□□□□□ -2.19
SOX2-OT-219ENST00000593330 HIVEP1P15822 2718 aa1.4□□□□□ -2.19
SOX2-OT-219ENST00000593330 CSPG4Q6UVK1 2322 aa1.4□□□□□ -2.19
SOX2-OT-219ENST00000593330 NBASA2RRP1 2371 aa1.4□□□□□ -2.19
SOX2-OT-219ENST00000593330 KLK9Q2XQG4 91 aa1.39□□□□□ -2.19
SOX2-OT-219ENST00000593330 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
SOX2-OT-219ENST00000593330 STAB2Q8WWQ8 2551 aa1.38□□□□□ -2.19
SOX2-OT-219ENST00000593330 FREM2Q5SZK8 3169 aa1.38□□□□□ -2.19
SOX2-OT-219ENST00000593330 CENPEQ02224 2701 aa1.38□□□□□ -2.19
SOX2-OT-219ENST00000593330 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
SOX2-OT-219ENST00000593330 DMDP11532 3685 aa1.37□□□□□ -2.19
SOX2-OT-219ENST00000593330 TRIOO75962 3097 aa1.36□□□□□ -2.19
SOX2-OT-219ENST00000593330 MAP1AP78559 2803 aaPredicted RBP1.36□□□□□ -2.19
SOX2-OT-219ENST00000593330 DMBT1Q9UGM3 2413 aaPredicted RBP1.36□□□□□ -2.19
SOX2-OT-219ENST00000593330 SPINK1P00995 79 aa1.36□□□□□ -2.19
SOX2-OT-219ENST00000593330 SPENQ96T58 3664 aaKnown RBP1.36□□□□□ -2.19
SOX2-OT-219ENST00000593330 CHD7Q9P2D1 2997 aa1.35□□□□□ -2.19
SOX2-OT-219ENST00000593330 ACANP16112 2415 aa1.35□□□□□ -2.19
SOX2-OT-219ENST00000593330 SONP18583 2426 aaKnown RBP1.35□□□□□ -2.19
SOX2-OT-219ENST00000593330 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
SOX2-OT-219ENST00000593330 NOP10Q9NPE3 64 aaKnown RBP1.35□□□□□ -2.19
SOX2-OT-219ENST00000593330 DCHS2Q6V1P9 2916 aa1.34□□□□□ -2.19
SOX2-OT-219ENST00000593330 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
SOX2-OT-219ENST00000593330 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
SOX2-OT-219ENST00000593330 ADGRG4Q8IZF6 3080 aa1.31□□□□□ -2.2
SOX2-OT-219ENST00000593330 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
SOX2-OT-219ENST00000593330 DMXL2Q8TDJ6 3036 aa1.31□□□□□ -2.2
SOX2-OT-219ENST00000593330 HMCN2Q8NDA2 5059 aa1.31□□□□□ -2.2
SOX2-OT-219ENST00000593330 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
SOX2-OT-219ENST00000593330 CHD9Q3L8U1 2897 aa1.29□□□□□ -2.2
SOX2-OT-219ENST00000593330 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
SOX2-OT-219ENST00000593330 ATMQ13315 3056 aa1.29□□□□□ -2.2
SOX2-OT-219ENST00000593330 APC2O95996 2303 aa1.29□□□□□ -2.2
SOX2-OT-219ENST00000593330 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
SOX2-OT-219ENST00000593330 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
SOX2-OT-219ENST00000593330 CSMD2Q7Z408 3487 aa1.28□□□□□ -2.21
SOX2-OT-219ENST00000593330 LAMA5O15230 3695 aa1.27□□□□□ -2.21
SOX2-OT-219ENST00000593330 STATHP02808 62 aa1.27□□□□□ -2.21
SOX2-OT-219ENST00000593330 APELAP0DMC3 54 aa1.27□□□□□ -2.21
SOX2-OT-219ENST00000593330 SVEP1Q4LDE5 3571 aa1.27□□□□□ -2.21
SOX2-OT-219ENST00000593330 AKAP6Q13023 2319 aa1.25□□□□□ -2.21
SOX2-OT-219ENST00000593330 CUBNO60494 3623 aa1.25□□□□□ -2.21
SOX2-OT-219ENST00000593330 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
SOX2-OT-219ENST00000593330 H0YGG7 62 aa1.22□□□□□ -2.21
SOX2-OT-219ENST00000593330 M0QZ58 72 aa1.22□□□□□ -2.21
SOX2-OT-219ENST00000593330 DEFB1P60022 68 aa1.22□□□□□ -2.21
SOX2-OT-219ENST00000593330 CSMD3Q7Z407 3707 aa1.21□□□□□ -2.22
SOX2-OT-219ENST00000593330 ACACAQ13085 2346 aa1.21□□□□□ -2.22
SOX2-OT-219ENST00000593330 ANK2Q01484 3957 aa1.21□□□□□ -2.22
SOX2-OT-219ENST00000593330 SRRM2Q9UQ35 2752 aaKnown RBP1.2□□□□□ -2.22
SOX2-OT-219ENST00000593330 H3BUX3 64 aa1.2□□□□□ -2.22
SOX2-OT-219ENST00000593330 RHPN1-AS1Q9BWJ2 59 aa1.2□□□□□ -2.22
SOX2-OT-219ENST00000593330 MGAQ8IWI9 3026 aa1.19□□□□□ -2.22
SOX2-OT-219ENST00000593330 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
SOX2-OT-219ENST00000593330 HTN1P15515 57 aa1.18□□□□□ -2.22
SOX2-OT-219ENST00000593330 COX14Q96I36 57 aa1.18□□□□□ -2.22
SOX2-OT-219ENST00000593330 KMT2DO14686 5537 aa1.18□□□□□ -2.22
SOX2-OT-219ENST00000593330 TACC2O95359 2948 aa1.17□□□□□ -2.22
SOX2-OT-219ENST00000593330 LAMA1P25391 3075 aa1.17□□□□□ -2.22
SOX2-OT-219ENST00000593330 AKAP9Q99996 3911 aa1.17□□□□□ -2.22
SOX2-OT-219ENST00000593330 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
SOX2-OT-219ENST00000593330 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
SOX2-OT-219ENST00000593330 SMR3AQ99954 134 aa1.15□□□□□ -2.23
SOX2-OT-219ENST00000593330 PRKDCP78527 4128 aaKnown RBP1.15□□□□□ -2.23
SOX2-OT-219ENST00000593330 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
SOX2-OT-219ENST00000593330 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
SOX2-OT-219ENST00000593330 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
SOX2-OT-219ENST00000593330 KMT2AQ03164 3969 aa1.14□□□□□ -2.23
SOX2-OT-219ENST00000593330 FRAS1Q86XX4 4008 aa1.14□□□□□ -2.23
SOX2-OT-219ENST00000593330 DEFB135Q30KP9 77 aa1.13□□□□□ -2.23
SOX2-OT-219ENST00000593330 DEFB136Q30KP8 78 aa1.12□□□□□ -2.23
SOX2-OT-219ENST00000593330 SPINK6Q6UWN8 80 aa1.12□□□□□ -2.23
SOX2-OT-219ENST00000593330 DEFB108BQ8NET1 73 aa1.12□□□□□ -2.23
SOX2-OT-219ENST00000593330 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
SOX2-OT-219ENST00000593330 A0A096LNI7 61 aa1.11□□□□□ -2.23
SOX2-OT-219ENST00000593330 FAT3Q8TDW7 4589 aa1.11□□□□□ -2.23
SOX2-OT-219ENST00000593330 DYNC2H1Q8NCM8 4307 aaKnown RBP1.1□□□□□ -2.23
SOX2-OT-219ENST00000593330 HECTD4Q9Y4D8 3996 aa1.1□□□□□ -2.23
SOX2-OT-219ENST00000593330 TNP1P09430 55 aa1.1□□□□□ -2.23
SOX2-OT-219ENST00000593330 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
SOX2-OT-219ENST00000593330 SPART-AS1P0CW21 52 aa1.09□□□□□ -2.23
SOX2-OT-219ENST00000593330 DNAH1Q9P2D7 4330 aa1.08□□□□□ -2.24
SOX2-OT-219ENST00000593330 USH2AO75445 5202 aa1.08□□□□□ -2.24
SOX2-OT-219ENST00000593330 M0R2T5 61 aa1.08□□□□□ -2.24
SOX2-OT-219ENST00000593330 DEFB110Q30KQ9 67 aa1.07□□□□□ -2.24
SOX2-OT-219ENST00000593330 ZNF469Q96JG9 3925 aaPredicted RBP1.06□□□□□ -2.24
SOX2-OT-219ENST00000593330 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
SOX2-OT-219ENST00000593330 C9orf92A6NGG3 77 aa1.04□□□□□ -2.24
SOX2-OT-219ENST00000593330 CMYA5Q8N3K9 4069 aa1.04□□□□□ -2.24
SOX2-OT-219ENST00000593330 SACSQ9NZJ4 4579 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms