RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 SPRR2GQ9BYE4 73 aa6.83□□□□□ -1.32
ERCC1-213ENST00000592023 MT1BP07438 61 aa6.82□□□□□ -1.32
ERCC1-213ENST00000592023 Q5VV11 94 aa6.82□□□□□ -1.32
ERCC1-213ENST00000592023 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
ERCC1-213ENST00000592023 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
ERCC1-213ENST00000592023 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
ERCC1-213ENST00000592023 NDUFC1O43677 76 aa6.76□□□□□ -1.33
ERCC1-213ENST00000592023 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
ERCC1-213ENST00000592023 MP68P56378 58 aa6.75□□□□□ -1.33
ERCC1-213ENST00000592023 A6NN06 94 aa6.74□□□□□ -1.33
ERCC1-213ENST00000592023 A8MUN3 132 aa6.74□□□□□ -1.33
ERCC1-213ENST00000592023 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
ERCC1-213ENST00000592023 J3QR89 54 aa6.72□□□□□ -1.33
ERCC1-213ENST00000592023 CRIPTQ9P021 101 aa6.71□□□□□ -1.34
ERCC1-213ENST00000592023 H0YAA0 97 aa6.68□□□□□ -1.34
ERCC1-213ENST00000592023 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
ERCC1-213ENST00000592023 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
ERCC1-213ENST00000592023 SCGB1A1P11684 91 aa6.64□□□□□ -1.35
ERCC1-213ENST00000592023 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
ERCC1-213ENST00000592023 H3BPC8 53 aa6.63□□□□□ -1.35
ERCC1-213ENST00000592023 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
ERCC1-213ENST00000592023 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
ERCC1-213ENST00000592023 P0C880 135 aa6.5□□□□□ -1.37
ERCC1-213ENST00000592023 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
ERCC1-213ENST00000592023 R4GN34 69 aa6.47□□□□□ -1.37
ERCC1-213ENST00000592023 K7ERU9 68 aa6.46□□□□□ -1.38
ERCC1-213ENST00000592023 NEBP20929 6669 aa6.44□□□□□ -1.38
ERCC1-213ENST00000592023 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
ERCC1-213ENST00000592023 M0QZ58 72 aa6.44□□□□□ -1.38
ERCC1-213ENST00000592023 SMIM20Q8N5G0 67 aa6.43□□□□□ -1.38
ERCC1-213ENST00000592023 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
ERCC1-213ENST00000592023 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
ERCC1-213ENST00000592023 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
ERCC1-213ENST00000592023 ACYP2P14621 99 aa6.39□□□□□ -1.39
ERCC1-213ENST00000592023 MT1XP80297 61 aa6.39□□□□□ -1.39
ERCC1-213ENST00000592023 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
ERCC1-213ENST00000592023 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
ERCC1-213ENST00000592023 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
ERCC1-213ENST00000592023 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
ERCC1-213ENST00000592023 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
ERCC1-213ENST00000592023 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
ERCC1-213ENST00000592023 KMT2DO14686 5537 aa6.24□□□□□ -1.41
ERCC1-213ENST00000592023 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
ERCC1-213ENST00000592023 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
ERCC1-213ENST00000592023 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
ERCC1-213ENST00000592023 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
ERCC1-213ENST00000592023 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
ERCC1-213ENST00000592023 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
ERCC1-213ENST00000592023 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
ERCC1-213ENST00000592023 SPRR2EP22531 72 aa6.14□□□□□ -1.43
ERCC1-213ENST00000592023 SPRR2BP35325 72 aa6.14□□□□□ -1.43
ERCC1-213ENST00000592023 SPRR2AP35326 72 aa6.14□□□□□ -1.43
ERCC1-213ENST00000592023 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
ERCC1-213ENST00000592023 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
ERCC1-213ENST00000592023 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
ERCC1-213ENST00000592023 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
ERCC1-213ENST00000592023 COA5Q86WW8 74 aa6.08□□□□□ -1.44
ERCC1-213ENST00000592023 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
ERCC1-213ENST00000592023 COX7CP15954 63 aa6.03□□□□□ -1.44
ERCC1-213ENST00000592023 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
ERCC1-213ENST00000592023 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
ERCC1-213ENST00000592023 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
ERCC1-213ENST00000592023 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
ERCC1-213ENST00000592023 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
ERCC1-213ENST00000592023 SEC61GP60059 68 aa5.95□□□□□ -1.46
ERCC1-213ENST00000592023 H7BZZ5 65 aa5.94□□□□□ -1.46
ERCC1-213ENST00000592023 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
ERCC1-213ENST00000592023 SPRR2DP22532 72 aa5.93□□□□□ -1.46
ERCC1-213ENST00000592023 A0A0D9SG42 100 aa5.91□□□□□ -1.46
ERCC1-213ENST00000592023 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
ERCC1-213ENST00000592023 A0A1B0GU33 70 aa5.84□□□□□ -1.47
ERCC1-213ENST00000592023 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
ERCC1-213ENST00000592023 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
ERCC1-213ENST00000592023 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
ERCC1-213ENST00000592023 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
ERCC1-213ENST00000592023 A0A1B0GU69 56 aa5.77□□□□□ -1.49
ERCC1-213ENST00000592023 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
ERCC1-213ENST00000592023 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
ERCC1-213ENST00000592023 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
ERCC1-213ENST00000592023 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
ERCC1-213ENST00000592023 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
ERCC1-213ENST00000592023 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
ERCC1-213ENST00000592023 A8MU10 97 aa5.68□□□□□ -1.5
ERCC1-213ENST00000592023 MT1EP04732 61 aa5.67□□□□□ -1.5
ERCC1-213ENST00000592023 ATP5EP56381 51 aaPredicted RBP5.64□□□□□ -1.51
ERCC1-213ENST00000592023 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
ERCC1-213ENST00000592023 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
ERCC1-213ENST00000592023 PCP4P48539 62 aa5.58□□□□□ -1.52
ERCC1-213ENST00000592023 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
ERCC1-213ENST00000592023 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
ERCC1-213ENST00000592023 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
ERCC1-213ENST00000592023 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
ERCC1-213ENST00000592023 TMEM258P61165 79 aa5.49□□□□□ -1.53
ERCC1-213ENST00000592023 TNP1P09430 55 aa5.48□□□□□ -1.53
ERCC1-213ENST00000592023 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
ERCC1-213ENST00000592023 MT1GP13640 62 aa5.45□□□□□ -1.54
ERCC1-213ENST00000592023 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
ERCC1-213ENST00000592023 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
ERCC1-213ENST00000592023 MT1LQ93083 61 aa5.42□□□□□ -1.54
ERCC1-213ENST00000592023 MT1MQ8N339 61 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms