RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 MDN1Q9NU22 5596 aa9.43□□□□□ -0.9
DDX39A-215ENST00000590696 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
DDX39A-215ENST00000590696 LOC101927531A0A1B0GV80 90 aa9.37□□□□□ -0.91
DDX39A-215ENST00000590696 NDUFC1O43677 76 aa9.3□□□□□ -0.92
DDX39A-215ENST00000590696 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
DDX39A-215ENST00000590696 F8W1H4 67 aa9.29□□□□□ -0.92
DDX39A-215ENST00000590696 H0YAA0 97 aa9.29□□□□□ -0.92
DDX39A-215ENST00000590696 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
DDX39A-215ENST00000590696 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
DDX39A-215ENST00000590696 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
DDX39A-215ENST00000590696 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
DDX39A-215ENST00000590696 A8MUN3 132 aa9.19□□□□□ -0.94
DDX39A-215ENST00000590696 H0Y9P7 68 aa9.19□□□□□ -0.94
DDX39A-215ENST00000590696 UQCRQO14949 82 aa9.19□□□□□ -0.94
DDX39A-215ENST00000590696 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
DDX39A-215ENST00000590696 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
DDX39A-215ENST00000590696 ATOX1O00244 68 aa9.17□□□□□ -0.94
DDX39A-215ENST00000590696 ACYP1P07311 99 aa9.17□□□□□ -0.94
DDX39A-215ENST00000590696 MT1XP80297 61 aa9.15□□□□□ -0.94
DDX39A-215ENST00000590696 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
DDX39A-215ENST00000590696 SPRR2EP22531 72 aa9.13□□□□□ -0.95
DDX39A-215ENST00000590696 SPRR2BP35325 72 aa9.13□□□□□ -0.95
DDX39A-215ENST00000590696 SPRR2AP35326 72 aa9.13□□□□□ -0.95
DDX39A-215ENST00000590696 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
DDX39A-215ENST00000590696 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
DDX39A-215ENST00000590696 KRTAP8-1Q8IUC2 63 aa9.05□□□□□ -0.96
DDX39A-215ENST00000590696 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
DDX39A-215ENST00000590696 LINC00208Q96KT6 92 aa9.02□□□□□ -0.97
DDX39A-215ENST00000590696 R4GN34 69 aa9□□□□□ -0.97
DDX39A-215ENST00000590696 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
DDX39A-215ENST00000590696 P0C880 135 aa8.96□□□□□ -0.98
DDX39A-215ENST00000590696 LCE1AQ5T7P2 110 aa8.96□□□□□ -0.98
DDX39A-215ENST00000590696 PCP4L1A6NKN8 68 aa8.95□□□□□ -0.98
DDX39A-215ENST00000590696 M0QZ58 72 aa8.91□□□□□ -0.98
DDX39A-215ENST00000590696 MP68P56378 58 aa8.91□□□□□ -0.98
DDX39A-215ENST00000590696 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
DDX39A-215ENST00000590696 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
DDX39A-215ENST00000590696 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
DDX39A-215ENST00000590696 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
DDX39A-215ENST00000590696 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
DDX39A-215ENST00000590696 LINC00643Q86TS7 51 aa8.87□□□□□ -0.99
DDX39A-215ENST00000590696 OCR1Q9BZK8 76 aa8.87□□□□□ -0.99
DDX39A-215ENST00000590696 SPRR2DP22532 72 aa8.83□□□□□ -1
DDX39A-215ENST00000590696 LINC01554Q52M75 96 aa8.82□□□□□ -1
DDX39A-215ENST00000590696 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
DDX39A-215ENST00000590696 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
DDX39A-215ENST00000590696 KRTAP10-7P60409 375 aaPredicted RBP8.74□□□□□ -1.01
DDX39A-215ENST00000590696 H3BPC8 53 aa8.73□□□□□ -1.01
DDX39A-215ENST00000590696 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
DDX39A-215ENST00000590696 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
DDX39A-215ENST00000590696 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
DDX39A-215ENST00000590696 MT-ATP8P03928 68 aa8.57□□□□□ -1.04
DDX39A-215ENST00000590696 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
DDX39A-215ENST00000590696 ACYP2P14621 99 aa8.51□□□□□ -1.05
DDX39A-215ENST00000590696 SPTSSBQ8NFR3 76 aa8.46□□□□□ -1.06
DDX39A-215ENST00000590696 A0A1B0GV90 55 aa8.42□□□□□ -1.06
DDX39A-215ENST00000590696 J3QR89 54 aa8.39□□□□□ -1.07
DDX39A-215ENST00000590696 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
DDX39A-215ENST00000590696 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
DDX39A-215ENST00000590696 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
DDX39A-215ENST00000590696 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
DDX39A-215ENST00000590696 LCE5AQ5TCM9 118 aa8.19□□□□□ -1.1
DDX39A-215ENST00000590696 KRTAP19-7Q3SYF9 63 aa8.18□□□□□ -1.1
DDX39A-215ENST00000590696 DSTQ03001 7570 aaKnown RBP8.16□□□□□ -1.1
DDX39A-215ENST00000590696 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
DDX39A-215ENST00000590696 MT1EP04732 61 aa8.13□□□□□ -1.11
DDX39A-215ENST00000590696 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
DDX39A-215ENST00000590696 KRTAP4-9Q9BYQ8 210 aa8.12□□□□□ -1.11
DDX39A-215ENST00000590696 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
DDX39A-215ENST00000590696 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
DDX39A-215ENST00000590696 A0A0D9SG42 100 aa7.96□□□□□ -1.14
DDX39A-215ENST00000590696 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.14
DDX39A-215ENST00000590696 K7ERU9 68 aa7.91□□□□□ -1.14
DDX39A-215ENST00000590696 MT1GP13640 62 aa7.9□□□□□ -1.14
DDX39A-215ENST00000590696 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
DDX39A-215ENST00000590696 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
DDX39A-215ENST00000590696 COA5Q86WW8 74 aa7.88□□□□□ -1.15
DDX39A-215ENST00000590696 SEC61GP60059 68 aa7.87□□□□□ -1.15
DDX39A-215ENST00000590696 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
DDX39A-215ENST00000590696 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
DDX39A-215ENST00000590696 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
DDX39A-215ENST00000590696 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
DDX39A-215ENST00000590696 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
DDX39A-215ENST00000590696 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
DDX39A-215ENST00000590696 A0A1B0GU33 70 aa7.77□□□□□ -1.17
DDX39A-215ENST00000590696 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
DDX39A-215ENST00000590696 MT4P47944 62 aa7.76□□□□□ -1.17
DDX39A-215ENST00000590696 MT1MQ8N339 61 aa7.76□□□□□ -1.17
DDX39A-215ENST00000590696 HMCN1Q96RW7 5635 aa7.74□□□□□ -1.17
DDX39A-215ENST00000590696 MT1LQ93083 61 aa7.71□□□□□ -1.18
DDX39A-215ENST00000590696 KRTAP4-3Q9BYR4 195 aa7.61□□□□□ -1.19
DDX39A-215ENST00000590696 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
DDX39A-215ENST00000590696 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
DDX39A-215ENST00000590696 KRTAP5-4Q6L8H1 288 aa7.57□□□□□ -1.2
DDX39A-215ENST00000590696 AHNAK2Q8IVF2 5795 aa7.56□□□□□ -1.2
DDX39A-215ENST00000590696 SMIM26A0A096LP01 95 aa7.55□□□□□ -1.2
DDX39A-215ENST00000590696 A8MU10 97 aa7.51□□□□□ -1.21
DDX39A-215ENST00000590696 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
DDX39A-215ENST00000590696 TNP1P09430 55 aa7.5□□□□□ -1.21
DDX39A-215ENST00000590696 COX7CP15954 63 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms