RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SPRR2GQ9BYE4 73 aa9.27□□□□□ -0.93
CIRBP-226ENST00000590171 ATOX1O00244 68 aa9.26□□□□□ -0.93
CIRBP-226ENST00000590171 MT1BP07438 61 aa9.26□□□□□ -0.93
CIRBP-226ENST00000590171 KLKP1Q107X0 134 aa9.23□□□□□ -0.93
CIRBP-226ENST00000590171 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
CIRBP-226ENST00000590171 Q5VV11 94 aa9.21□□□□□ -0.94
CIRBP-226ENST00000590171 A6NN06 94 aa9.14□□□□□ -0.95
CIRBP-226ENST00000590171 KRTAP6-3Q3LI67 103 aa9.14□□□□□ -0.95
CIRBP-226ENST00000590171 OCR1Q9BZK8 76 aa9.14□□□□□ -0.95
CIRBP-226ENST00000590171 LINC00208Q96KT6 92 aa9.13□□□□□ -0.95
CIRBP-226ENST00000590171 MP68P56378 58 aa9.12□□□□□ -0.95
CIRBP-226ENST00000590171 NDUFC1O43677 76 aa9.07□□□□□ -0.96
CIRBP-226ENST00000590171 IMUPQ9GZP8 106 aa9.07□□□□□ -0.96
CIRBP-226ENST00000590171 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
CIRBP-226ENST00000590171 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
CIRBP-226ENST00000590171 A8MUN3 132 aa9.04□□□□□ -0.96
CIRBP-226ENST00000590171 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
CIRBP-226ENST00000590171 H0YAA0 97 aa9.03□□□□□ -0.96
CIRBP-226ENST00000590171 K7ERU9 68 aa9.01□□□□□ -0.97
CIRBP-226ENST00000590171 H3BPC8 53 aa8.99□□□□□ -0.97
CIRBP-226ENST00000590171 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
CIRBP-226ENST00000590171 ADM2Q7Z4H4 148 aa8.93□□□□□ -0.98
CIRBP-226ENST00000590171 NEBP20929 6669 aa8.88□□□□□ -0.99
CIRBP-226ENST00000590171 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
CIRBP-226ENST00000590171 DMAC1Q96GE9 116 aa8.82□□□□□ -1
CIRBP-226ENST00000590171 MUC12Q9UKN1 5478 aa8.81□□□□□ -1
CIRBP-226ENST00000590171 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
CIRBP-226ENST00000590171 P0C880 135 aa8.74□□□□□ -1.01
CIRBP-226ENST00000590171 KRTAP5-9P26371 169 aa8.72□□□□□ -1.01
CIRBP-226ENST00000590171 R4GN34 69 aa8.7□□□□□ -1.02
CIRBP-226ENST00000590171 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
CIRBP-226ENST00000590171 MT1XP80297 61 aa8.67□□□□□ -1.02
CIRBP-226ENST00000590171 PLAC4Q8WY50 150 aa8.65□□□□□ -1.02
CIRBP-226ENST00000590171 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
CIRBP-226ENST00000590171 PRO2289Q9P1D8 64 aa8.65□□□□□ -1.02
CIRBP-226ENST00000590171 KMT2DO14686 5537 aa8.63□□□□□ -1.03
CIRBP-226ENST00000590171 M0QZ58 72 aa8.63□□□□□ -1.03
CIRBP-226ENST00000590171 ACYP2P14621 99 aa8.63□□□□□ -1.03
CIRBP-226ENST00000590171 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
CIRBP-226ENST00000590171 MDN1Q9NU22 5596 aa8.57□□□□□ -1.04
CIRBP-226ENST00000590171 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
CIRBP-226ENST00000590171 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.05
CIRBP-226ENST00000590171 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
CIRBP-226ENST00000590171 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
CIRBP-226ENST00000590171 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
CIRBP-226ENST00000590171 KRTAP20-1Q3LI63 56 aa8.47□□□□□ -1.05
CIRBP-226ENST00000590171 PCP4P48539 62 aa8.46□□□□□ -1.06
CIRBP-226ENST00000590171 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
CIRBP-226ENST00000590171 SPRR2FQ96RM1 72 aa8.44□□□□□ -1.06
CIRBP-226ENST00000590171 KRTAP8-1Q8IUC2 63 aa8.4□□□□□ -1.06
CIRBP-226ENST00000590171 COX7CP15954 63 aa8.34□□□□□ -1.07
CIRBP-226ENST00000590171 SPRR2EP22531 72 aa8.33□□□□□ -1.08
CIRBP-226ENST00000590171 SPRR2BP35325 72 aa8.33□□□□□ -1.08
CIRBP-226ENST00000590171 SPRR2AP35326 72 aa8.33□□□□□ -1.08
CIRBP-226ENST00000590171 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
CIRBP-226ENST00000590171 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
CIRBP-226ENST00000590171 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
CIRBP-226ENST00000590171 COA5Q86WW8 74 aa8.25□□□□□ -1.09
CIRBP-226ENST00000590171 KRTAP2-3P0C7H8 128 aa8.24□□□□□ -1.09
CIRBP-226ENST00000590171 KRTAP2-4Q9BYR9 128 aa8.24□□□□□ -1.09
CIRBP-226ENST00000590171 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
CIRBP-226ENST00000590171 LCE1AQ5T7P2 110 aa8.22□□□□□ -1.09
CIRBP-226ENST00000590171 ANAPC13Q9BS18 74 aa8.18□□□□□ -1.1
CIRBP-226ENST00000590171 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
CIRBP-226ENST00000590171 H7BZZ5 65 aa8.17□□□□□ -1.1
CIRBP-226ENST00000590171 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
CIRBP-226ENST00000590171 SEC61GP60059 68 aa8.07□□□□□ -1.12
CIRBP-226ENST00000590171 SPRR2DP22532 72 aa8.05□□□□□ -1.12
CIRBP-226ENST00000590171 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
CIRBP-226ENST00000590171 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
CIRBP-226ENST00000590171 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
CIRBP-226ENST00000590171 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
CIRBP-226ENST00000590171 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
CIRBP-226ENST00000590171 A0A1B0GU33 70 aa7.89□□□□□ -1.15
CIRBP-226ENST00000590171 A0A0D9SG42 100 aa7.88□□□□□ -1.15
CIRBP-226ENST00000590171 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
CIRBP-226ENST00000590171 A0A1B0GU69 56 aa7.84□□□□□ -1.15
CIRBP-226ENST00000590171 ATP5EP56381 51 aaPredicted RBP7.84□□□□□ -1.15
CIRBP-226ENST00000590171 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
CIRBP-226ENST00000590171 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
CIRBP-226ENST00000590171 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
CIRBP-226ENST00000590171 TMEM258P61165 79 aa7.74□□□□□ -1.17
CIRBP-226ENST00000590171 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
CIRBP-226ENST00000590171 SMIM26A0A096LP01 95 aa7.68□□□□□ -1.18
CIRBP-226ENST00000590171 MT1EP04732 61 aa7.68□□□□□ -1.18
CIRBP-226ENST00000590171 LCE5AQ5TCM9 118 aa7.65□□□□□ -1.18
CIRBP-226ENST00000590171 PRR15LQ9BU68 103 aa7.65□□□□□ -1.18
CIRBP-226ENST00000590171 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
CIRBP-226ENST00000590171 A8MU10 97 aa7.61□□□□□ -1.19
CIRBP-226ENST00000590171 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
CIRBP-226ENST00000590171 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
CIRBP-226ENST00000590171 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
CIRBP-226ENST00000590171 DSTQ03001 7570 aaKnown RBP7.54□□□□□ -1.2
CIRBP-226ENST00000590171 MT1GP13640 62 aa7.41□□□□□ -1.22
CIRBP-226ENST00000590171 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.22
CIRBP-226ENST00000590171 UQCR11O14957 56 aa7.39□□□□□ -1.23
CIRBP-226ENST00000590171 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
CIRBP-226ENST00000590171 TNP1P09430 55 aa7.35□□□□□ -1.23
CIRBP-226ENST00000590171 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
CIRBP-226ENST00000590171 MT1LQ93083 61 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms