RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
APBA3-205ENST00000590064 DNAH3Q8TD57 4116 aa7.94□□□□□ -1.14
APBA3-205ENST00000590064 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
APBA3-205ENST00000590064 DNAH7Q8WXX0 4024 aa7.92□□□□□ -1.14
APBA3-205ENST00000590064 DNAH2Q9P225 4427 aa7.9□□□□□ -1.15
APBA3-205ENST00000590064 CMYA5Q8N3K9 4069 aa7.89□□□□□ -1.15
APBA3-205ENST00000590064 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
APBA3-205ENST00000590064 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
APBA3-205ENST00000590064 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
APBA3-205ENST00000590064 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
APBA3-205ENST00000590064 HECTD4Q9Y4D8 3996 aa7.77□□□□□ -1.17
APBA3-205ENST00000590064 FAT1Q14517 4588 aa7.75□□□□□ -1.17
APBA3-205ENST00000590064 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
APBA3-205ENST00000590064 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
APBA3-205ENST00000590064 TNP1P09430 55 aa7.71□□□□□ -1.17
APBA3-205ENST00000590064 M0R2T5 61 aa7.7□□□□□ -1.18
APBA3-205ENST00000590064 VPS13BQ7Z7G8 4022 aa7.7□□□□□ -1.18
APBA3-205ENST00000590064 KRTAP21-3Q3LHN1 58 aa7.67□□□□□ -1.18
APBA3-205ENST00000590064 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
APBA3-205ENST00000590064 DNHD1Q96M86 4753 aa7.59□□□□□ -1.19
APBA3-205ENST00000590064 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
APBA3-205ENST00000590064 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
APBA3-205ENST00000590064 MT1HL1P0DM35 61 aa7.52□□□□□ -1.2
APBA3-205ENST00000590064 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
APBA3-205ENST00000590064 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
APBA3-205ENST00000590064 HYDINQ4G0P3 5121 aa7.36□□□□□ -1.23
APBA3-205ENST00000590064 APOBP04114 4563 aaKnown RBP7.35□□□□□ -1.23
APBA3-205ENST00000590064 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
APBA3-205ENST00000590064 FAT2Q9NYQ8 4349 aa7.31□□□□□ -1.24
APBA3-205ENST00000590064 PKHD1P08F94 4074 aa7.31□□□□□ -1.24
APBA3-205ENST00000590064 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
APBA3-205ENST00000590064 PKD1P98161 4303 aa7.16□□□□□ -1.26
APBA3-205ENST00000590064 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
APBA3-205ENST00000590064 RYR1P21817 5038 aa7.11□□□□□ -1.27
APBA3-205ENST00000590064 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
APBA3-205ENST00000590064 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
APBA3-205ENST00000590064 LRP2P98164 4655 aa7.06□□□□□ -1.28
APBA3-205ENST00000590064 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
APBA3-205ENST00000590064 HSPG2P98160 4391 aa7.02□□□□□ -1.29
APBA3-205ENST00000590064 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
APBA3-205ENST00000590064 RYR3Q15413 4870 aa6.89□□□□□ -1.31
APBA3-205ENST00000590064 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
APBA3-205ENST00000590064 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
APBA3-205ENST00000590064 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
APBA3-205ENST00000590064 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
APBA3-205ENST00000590064 RYR2Q92736 4967 aa6.8□□□□□ -1.32
APBA3-205ENST00000590064 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
APBA3-205ENST00000590064 LPAP08519 4548 aa6.73□□□□□ -1.33
APBA3-205ENST00000590064 TNXBP22105 4242 aa6.71□□□□□ -1.34
APBA3-205ENST00000590064 INE1O15225 51 aa6.68□□□□□ -1.34
APBA3-205ENST00000590064 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
APBA3-205ENST00000590064 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
APBA3-205ENST00000590064 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
APBA3-205ENST00000590064 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
APBA3-205ENST00000590064 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
APBA3-205ENST00000590064 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
APBA3-205ENST00000590064 HERC2O95714 4834 aa6.37□□□□□ -1.39
APBA3-205ENST00000590064 MT2AP02795 61 aa6.36□□□□□ -1.39
APBA3-205ENST00000590064 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
APBA3-205ENST00000590064 MT1FP04733 61 aa6.36□□□□□ -1.39
APBA3-205ENST00000590064 ABCA13Q86UQ4 5058 aa6.34□□□□□ -1.39
APBA3-205ENST00000590064 MT1HP80294 61 aa6.34□□□□□ -1.39
APBA3-205ENST00000590064 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
APBA3-205ENST00000590064 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
APBA3-205ENST00000590064 MUC2Q02817 5179 aa6.2□□□□□ -1.42
APBA3-205ENST00000590064 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
APBA3-205ENST00000590064 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
APBA3-205ENST00000590064 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
APBA3-205ENST00000590064 MT1XP80297 61 aa6.11□□□□□ -1.43
APBA3-205ENST00000590064 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
APBA3-205ENST00000590064 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
APBA3-205ENST00000590064 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
APBA3-205ENST00000590064 MT1BP07438 61 aa6.05□□□□□ -1.44
APBA3-205ENST00000590064 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
APBA3-205ENST00000590064 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
APBA3-205ENST00000590064 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
APBA3-205ENST00000590064 HERC1Q15751 4861 aa5.98□□□□□ -1.45
APBA3-205ENST00000590064 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
APBA3-205ENST00000590064 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
APBA3-205ENST00000590064 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
APBA3-205ENST00000590064 PCLOQ9Y6V0 5065 aa5.83□□□□□ -1.48
APBA3-205ENST00000590064 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
APBA3-205ENST00000590064 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
APBA3-205ENST00000590064 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
APBA3-205ENST00000590064 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
APBA3-205ENST00000590064 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
APBA3-205ENST00000590064 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
APBA3-205ENST00000590064 LCE2BO14633 110 aa5.55□□□□□ -1.52
APBA3-205ENST00000590064 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
APBA3-205ENST00000590064 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
APBA3-205ENST00000590064 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
APBA3-205ENST00000590064 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
APBA3-205ENST00000590064 MT1GP13640 62 aa5.4□□□□□ -1.54
APBA3-205ENST00000590064 MT1LQ93083 61 aa5.39□□□□□ -1.55
APBA3-205ENST00000590064 KMT2DO14686 5537 aa5.35□□□□□ -1.55
APBA3-205ENST00000590064 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
APBA3-205ENST00000590064 MT1EP04732 61 aa5.32□□□□□ -1.56
APBA3-205ENST00000590064 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
APBA3-205ENST00000590064 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
APBA3-205ENST00000590064 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms