RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
LINC01539-203ENST00000589447 SSBP3-AS1Q7Z2R9 100 aa1.95□□□□□ -2.1
LINC01539-203ENST00000589447 PKD1P98161 4303 aa1.95□□□□□ -2.1
LINC01539-203ENST00000589447 VPS13DQ5THJ4 4388 aa1.94□□□□□ -2.1
LINC01539-203ENST00000589447 NUPR2A6NF83 97 aa1.94□□□□□ -2.1
LINC01539-203ENST00000589447 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
LINC01539-203ENST00000589447 DNAH2Q9P225 4427 aa1.94□□□□□ -2.1
LINC01539-203ENST00000589447 PANO1I0J062 215 aa1.93□□□□□ -2.1
LINC01539-203ENST00000589447 Q6ZRN7 208 aaPredicted RBP1.93□□□□□ -2.1
LINC01539-203ENST00000589447 ADM2Q7Z4H4 148 aa1.93□□□□□ -2.1
LINC01539-203ENST00000589447 IGKV2D-30A0A075B6S6 120 aa1.92□□□□□ -2.1
LINC01539-203ENST00000589447 A0A087WTM6 91 aa1.92□□□□□ -2.1
LINC01539-203ENST00000589447 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
LINC01539-203ENST00000589447 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
LINC01539-203ENST00000589447 HSPG2P98160 4391 aa1.91□□□□□ -2.1
LINC01539-203ENST00000589447 LY6G6CO95867 125 aa1.91□□□□□ -2.1
LINC01539-203ENST00000589447 DMBT1Q9UGM3 2413 aaPredicted RBP1.91□□□□□ -2.1
LINC01539-203ENST00000589447 DNAH17Q9UFH2 4485 aa1.9□□□□□ -2.1
LINC01539-203ENST00000589447 A8MUU9 505 aa1.9□□□□□ -2.11
LINC01539-203ENST00000589447 ANAPC11Q9NYG5 84 aa1.9□□□□□ -2.11
LINC01539-203ENST00000589447 DYNC1H1Q14204 4646 aaKnown RBP1.9□□□□□ -2.11
LINC01539-203ENST00000589447 HERC1Q15751 4861 aa1.9□□□□□ -2.11
LINC01539-203ENST00000589447 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
LINC01539-203ENST00000589447 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
LINC01539-203ENST00000589447 A0A1B0GVY2 172 aa1.89□□□□□ -2.11
LINC01539-203ENST00000589447 TYMSOSQ8TAI1 123 aa1.89□□□□□ -2.11
LINC01539-203ENST00000589447 DNAH11Q96DT5 4516 aa1.89□□□□□ -2.11
LINC01539-203ENST00000589447 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
LINC01539-203ENST00000589447 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
LINC01539-203ENST00000589447 SPINK1P00995 79 aa1.87□□□□□ -2.11
LINC01539-203ENST00000589447 C1orf134Q5TEV5 83 aa1.87□□□□□ -2.11
LINC01539-203ENST00000589447 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
LINC01539-203ENST00000589447 A0A1B0GU33 70 aa1.86□□□□□ -2.11
LINC01539-203ENST00000589447 H1FX-AS1Q4G0G2 97 aa1.86□□□□□ -2.11
LINC01539-203ENST00000589447 LRP1BQ9NZR2 4599 aa1.85□□□□□ -2.11
LINC01539-203ENST00000589447 H0YAA0 97 aa1.85□□□□□ -2.11
LINC01539-203ENST00000589447 ROMO1P60602 79 aa1.85□□□□□ -2.11
LINC01539-203ENST00000589447 RPS29P62273 56 aaKnown RBP1.85□□□□□ -2.11
LINC01539-203ENST00000589447 KRTAP13-2Q52LG2 175 aa1.85□□□□□ -2.11
LINC01539-203ENST00000589447 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
LINC01539-203ENST00000589447 DNAH5Q8TE73 4624 aa1.85□□□□□ -2.11
LINC01539-203ENST00000589447 Q6ZSA8 131 aa1.84□□□□□ -2.11
LINC01539-203ENST00000589447 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
LINC01539-203ENST00000589447 VPS13BQ7Z7G8 4022 aa1.83□□□□□ -2.12
LINC01539-203ENST00000589447 DNAH8Q96JB1 4490 aa1.81□□□□□ -2.12
LINC01539-203ENST00000589447 KRTAP1-4P0C5Y4 121 aa1.81□□□□□ -2.12
LINC01539-203ENST00000589447 FAT1Q14517 4588 aa1.81□□□□□ -2.12
LINC01539-203ENST00000589447 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
LINC01539-203ENST00000589447 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
LINC01539-203ENST00000589447 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
LINC01539-203ENST00000589447 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
LINC01539-203ENST00000589447 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
LINC01539-203ENST00000589447 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
LINC01539-203ENST00000589447 PKHD1L1Q86WI1 4243 aa1.78□□□□□ -2.12
LINC01539-203ENST00000589447 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.13
LINC01539-203ENST00000589447 KRTAP10-1P60331 282 aa1.77□□□□□ -2.13
LINC01539-203ENST00000589447 C9orf92A6NGG3 77 aa1.76□□□□□ -2.13
LINC01539-203ENST00000589447 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
LINC01539-203ENST00000589447 P0C880 135 aa1.75□□□□□ -2.13
LINC01539-203ENST00000589447 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
LINC01539-203ENST00000589447 CRIPTQ9P021 101 aa1.75□□□□□ -2.13
LINC01539-203ENST00000589447 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
LINC01539-203ENST00000589447 Q5VSD8 79 aa1.74□□□□□ -2.13
LINC01539-203ENST00000589447 S4R3F8 94 aa1.74□□□□□ -2.13
LINC01539-203ENST00000589447 LRP2P98164 4655 aa1.74□□□□□ -2.13
LINC01539-203ENST00000589447 PRO2289Q9P1D8 64 aa1.73□□□□□ -2.13
LINC01539-203ENST00000589447 A0A0D9SG42 100 aa1.72□□□□□ -2.13
LINC01539-203ENST00000589447 SMR3BP02814 79 aaPredicted RBP1.72□□□□□ -2.13
LINC01539-203ENST00000589447 TPRXLQ17RH7 258 aa1.72□□□□□ -2.13
LINC01539-203ENST00000589447 R4GN34 69 aa1.72□□□□□ -2.13
LINC01539-203ENST00000589447 KRTAP10-6P60371 365 aaPredicted RBP1.71□□□□□ -2.14
LINC01539-203ENST00000589447 TNXBP22105 4242 aa1.7□□□□□ -2.14
LINC01539-203ENST00000589447 RNF213Q63HN8 5207 aa1.7□□□□□ -2.14
LINC01539-203ENST00000589447 MT1HL1P0DM35 61 aa1.69□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
LINC01539-203ENST00000589447 C10orf95Q9H7T3 257 aa1.69□□□□□ -2.14
LINC01539-203ENST00000589447 M0QZ58 72 aa1.68□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
LINC01539-203ENST00000589447 MT3P25713 68 aa1.67□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP12-2P59991 146 aa1.67□□□□□ -2.14
LINC01539-203ENST00000589447 LPAP08519 4548 aa1.66□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
LINC01539-203ENST00000589447 KRTAP2-2Q9BYT5 123 aa1.65□□□□□ -2.15
LINC01539-203ENST00000589447 KRTAP10-7P60409 375 aaPredicted RBP1.63□□□□□ -2.15
LINC01539-203ENST00000589447 KRTAP10-8P60410 259 aa1.62□□□□□ -2.15
LINC01539-203ENST00000589447 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
LINC01539-203ENST00000589447 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
LINC01539-203ENST00000589447 PP632Q6XCG6 107 aa1.61□□□□□ -2.15
LINC01539-203ENST00000589447 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
LINC01539-203ENST00000589447 MUC2Q02817 5179 aa1.59□□□□□ -2.15
LINC01539-203ENST00000589447 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
LINC01539-203ENST00000589447 INE1O15225 51 aa1.56□□□□□ -2.16
LINC01539-203ENST00000589447 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
LINC01539-203ENST00000589447 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
LINC01539-203ENST00000589447 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
LINC01539-203ENST00000589447 TNP1P09430 55 aa1.51□□□□□ -2.17
LINC01539-203ENST00000589447 MUC17Q685J3 4493 aa1.49□□□□□ -2.17
LINC01539-203ENST00000589447 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
LINC01539-203ENST00000589447 SPRR5A0A1B0GTR4 108 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms