RNA–Protein interactions for RNA: ENST00000588861.1

HDHD2-206, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

Gene HDHD2, Length 3,229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-206ENST00000588861 PRKDCP78527 4128 aaKnown RBP4.75□□□□□ -1.65
HDHD2-206ENST00000588861 DNAH2Q9P225 4427 aa4.75□□□□□ -1.65
HDHD2-206ENST00000588861 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
HDHD2-206ENST00000588861 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
HDHD2-206ENST00000588861 DNAH11Q96DT5 4516 aa4.73□□□□□ -1.65
HDHD2-206ENST00000588861 KRTAP10-1P60331 282 aa4.7□□□□□ -1.66
HDHD2-206ENST00000588861 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
HDHD2-206ENST00000588861 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
HDHD2-206ENST00000588861 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
HDHD2-206ENST00000588861 RPS29P62273 56 aaKnown RBP4.66□□□□□ -1.66
HDHD2-206ENST00000588861 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
HDHD2-206ENST00000588861 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
HDHD2-206ENST00000588861 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
HDHD2-206ENST00000588861 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
HDHD2-206ENST00000588861 DYNC1H1Q14204 4646 aaKnown RBP4.57□□□□□ -1.68
HDHD2-206ENST00000588861 M0QZ58 72 aa4.56□□□□□ -1.68
HDHD2-206ENST00000588861 SMR3BP02814 79 aaPredicted RBP4.55□□□□□ -1.68
HDHD2-206ENST00000588861 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
HDHD2-206ENST00000588861 RYR2Q92736 4967 aa4.54□□□□□ -1.68
HDHD2-206ENST00000588861 SACSQ9NZJ4 4579 aa4.51□□□□□ -1.69
HDHD2-206ENST00000588861 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
HDHD2-206ENST00000588861 R4GN34 69 aa4.46□□□□□ -1.7
HDHD2-206ENST00000588861 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
HDHD2-206ENST00000588861 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
HDHD2-206ENST00000588861 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
HDHD2-206ENST00000588861 PKD1P98161 4303 aa4.41□□□□□ -1.7
HDHD2-206ENST00000588861 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
HDHD2-206ENST00000588861 LCE2BO14633 110 aa4.39□□□□□ -1.71
HDHD2-206ENST00000588861 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
HDHD2-206ENST00000588861 HERC2O95714 4834 aa4.35□□□□□ -1.71
HDHD2-206ENST00000588861 HSPG2P98160 4391 aa4.33□□□□□ -1.72
HDHD2-206ENST00000588861 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
HDHD2-206ENST00000588861 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
HDHD2-206ENST00000588861 FAT1Q14517 4588 aa4.3□□□□□ -1.72
HDHD2-206ENST00000588861 RYR3Q15413 4870 aa4.29□□□□□ -1.72
HDHD2-206ENST00000588861 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
HDHD2-206ENST00000588861 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
HDHD2-206ENST00000588861 HYDINQ4G0P3 5121 aa4.28□□□□□ -1.72
HDHD2-206ENST00000588861 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
HDHD2-206ENST00000588861 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
HDHD2-206ENST00000588861 TNXBP22105 4242 aa4.19□□□□□ -1.74
HDHD2-206ENST00000588861 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
HDHD2-206ENST00000588861 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
HDHD2-206ENST00000588861 RYR1P21817 5038 aa4.17□□□□□ -1.74
HDHD2-206ENST00000588861 TNP1P09430 55 aa4.16□□□□□ -1.74
HDHD2-206ENST00000588861 INE1O15225 51 aa4.14□□□□□ -1.75
HDHD2-206ENST00000588861 LPAP08519 4548 aa4.13□□□□□ -1.75
HDHD2-206ENST00000588861 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
HDHD2-206ENST00000588861 LRP2P98164 4655 aa4.06□□□□□ -1.76
HDHD2-206ENST00000588861 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
HDHD2-206ENST00000588861 Q5VSD8 79 aa4.01□□□□□ -1.77
HDHD2-206ENST00000588861 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
HDHD2-206ENST00000588861 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
HDHD2-206ENST00000588861 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
HDHD2-206ENST00000588861 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
HDHD2-206ENST00000588861 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.79
HDHD2-206ENST00000588861 HERC1Q15751 4861 aa3.88□□□□□ -1.79
HDHD2-206ENST00000588861 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
HDHD2-206ENST00000588861 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
HDHD2-206ENST00000588861 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
HDHD2-206ENST00000588861 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
HDHD2-206ENST00000588861 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
HDHD2-206ENST00000588861 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
HDHD2-206ENST00000588861 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
HDHD2-206ENST00000588861 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
HDHD2-206ENST00000588861 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
HDHD2-206ENST00000588861 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
HDHD2-206ENST00000588861 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
HDHD2-206ENST00000588861 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
HDHD2-206ENST00000588861 MUC2Q02817 5179 aa3.57□□□□□ -1.84
HDHD2-206ENST00000588861 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
HDHD2-206ENST00000588861 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
HDHD2-206ENST00000588861 M0R2T5 61 aa3.51□□□□□ -1.85
HDHD2-206ENST00000588861 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
HDHD2-206ENST00000588861 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
HDHD2-206ENST00000588861 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
HDHD2-206ENST00000588861 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
HDHD2-206ENST00000588861 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
HDHD2-206ENST00000588861 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
HDHD2-206ENST00000588861 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
HDHD2-206ENST00000588861 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.86
HDHD2-206ENST00000588861 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
HDHD2-206ENST00000588861 MT1XP80297 61 aa3.39□□□□□ -1.87
HDHD2-206ENST00000588861 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
HDHD2-206ENST00000588861 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
HDHD2-206ENST00000588861 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
HDHD2-206ENST00000588861 MT1FP04733 61 aa3.34□□□□□ -1.87
HDHD2-206ENST00000588861 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
HDHD2-206ENST00000588861 RNF213Q63HN8 5207 aa3.34□□□□□ -1.88
HDHD2-206ENST00000588861 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
HDHD2-206ENST00000588861 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
HDHD2-206ENST00000588861 MT1HP80294 61 aa3.31□□□□□ -1.88
HDHD2-206ENST00000588861 MT2AP02795 61 aa3.31□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
HDHD2-206ENST00000588861 MT1BP07438 61 aa3.3□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
HDHD2-206ENST00000588861 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms