RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
RANBP3-209ENST00000587411 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
RANBP3-209ENST00000587411 A0A0D9SG42 100 aa8.44□□□□□ -1.06
RANBP3-209ENST00000587411 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
RANBP3-209ENST00000587411 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
RANBP3-209ENST00000587411 S4R3F8 94 aa8.41□□□□□ -1.06
RANBP3-209ENST00000587411 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.06
RANBP3-209ENST00000587411 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
RANBP3-209ENST00000587411 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
RANBP3-209ENST00000587411 FAT1Q14517 4588 aa8.33□□□□□ -1.08
RANBP3-209ENST00000587411 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
RANBP3-209ENST00000587411 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
RANBP3-209ENST00000587411 XP32Q5T750 250 aa8.25□□□□□ -1.09
RANBP3-209ENST00000587411 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
RANBP3-209ENST00000587411 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
RANBP3-209ENST00000587411 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
RANBP3-209ENST00000587411 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
RANBP3-209ENST00000587411 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.09
RANBP3-209ENST00000587411 RYR2Q92736 4967 aa8.19□□□□□ -1.1
RANBP3-209ENST00000587411 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
RANBP3-209ENST00000587411 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
RANBP3-209ENST00000587411 TNXBP22105 4242 aa8.15□□□□□ -1.11
RANBP3-209ENST00000587411 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
RANBP3-209ENST00000587411 M0QZ58 72 aa8.13□□□□□ -1.11
RANBP3-209ENST00000587411 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
RANBP3-209ENST00000587411 HSPG2P98160 4391 aa8.09□□□□□ -1.11
RANBP3-209ENST00000587411 Q5VSD8 79 aa8.01□□□□□ -1.13
RANBP3-209ENST00000587411 RYR3Q15413 4870 aa8.01□□□□□ -1.13
RANBP3-209ENST00000587411 MYCBP2O75592 4640 aa7.89□□□□□ -1.15
RANBP3-209ENST00000587411 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
RANBP3-209ENST00000587411 R4GN34 69 aa7.81□□□□□ -1.16
RANBP3-209ENST00000587411 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
RANBP3-209ENST00000587411 KRTAP17-1Q9BYP8 105 aa7.78□□□□□ -1.16
RANBP3-209ENST00000587411 RYR1P21817 5038 aa7.78□□□□□ -1.16
RANBP3-209ENST00000587411 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
RANBP3-209ENST00000587411 LPAP08519 4548 aa7.72□□□□□ -1.17
RANBP3-209ENST00000587411 PLAC4Q8WY50 150 aa7.71□□□□□ -1.17
RANBP3-209ENST00000587411 LRP2P98164 4655 aa7.65□□□□□ -1.18
RANBP3-209ENST00000587411 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
RANBP3-209ENST00000587411 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
RANBP3-209ENST00000587411 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
RANBP3-209ENST00000587411 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
RANBP3-209ENST00000587411 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
RANBP3-209ENST00000587411 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
RANBP3-209ENST00000587411 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
RANBP3-209ENST00000587411 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
RANBP3-209ENST00000587411 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
RANBP3-209ENST00000587411 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
RANBP3-209ENST00000587411 HERC2O95714 4834 aa7.27□□□□□ -1.24
RANBP3-209ENST00000587411 TNP1P09430 55 aa7.24□□□□□ -1.25
RANBP3-209ENST00000587411 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
RANBP3-209ENST00000587411 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
RANBP3-209ENST00000587411 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
RANBP3-209ENST00000587411 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
RANBP3-209ENST00000587411 HERC1Q15751 4861 aa7.01□□□□□ -1.29
RANBP3-209ENST00000587411 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
RANBP3-209ENST00000587411 MUC2Q02817 5179 aa6.91□□□□□ -1.3
RANBP3-209ENST00000587411 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
RANBP3-209ENST00000587411 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
RANBP3-209ENST00000587411 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
RANBP3-209ENST00000587411 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
RANBP3-209ENST00000587411 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
RANBP3-209ENST00000587411 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
RANBP3-209ENST00000587411 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
RANBP3-209ENST00000587411 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
RANBP3-209ENST00000587411 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
RANBP3-209ENST00000587411 M0R2T5 61 aa6.6□□□□□ -1.35
RANBP3-209ENST00000587411 INE1O15225 51 aa6.6□□□□□ -1.35
RANBP3-209ENST00000587411 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
RANBP3-209ENST00000587411 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
RANBP3-209ENST00000587411 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
RANBP3-209ENST00000587411 MT1HP80294 61 aa6.53□□□□□ -1.36
RANBP3-209ENST00000587411 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
RANBP3-209ENST00000587411 MT2AP02795 61 aa6.52□□□□□ -1.37
RANBP3-209ENST00000587411 MT1FP04733 61 aa6.52□□□□□ -1.37
RANBP3-209ENST00000587411 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
RANBP3-209ENST00000587411 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
RANBP3-209ENST00000587411 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
RANBP3-209ENST00000587411 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
RANBP3-209ENST00000587411 MT1XP80297 61 aa6.43□□□□□ -1.38
RANBP3-209ENST00000587411 MT1BP07438 61 aa6.39□□□□□ -1.39
RANBP3-209ENST00000587411 LCE2BO14633 110 aa6.37□□□□□ -1.39
RANBP3-209ENST00000587411 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
RANBP3-209ENST00000587411 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
RANBP3-209ENST00000587411 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
RANBP3-209ENST00000587411 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
RANBP3-209ENST00000587411 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
RANBP3-209ENST00000587411 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
RANBP3-209ENST00000587411 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
RANBP3-209ENST00000587411 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
RANBP3-209ENST00000587411 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
RANBP3-209ENST00000587411 USH2AO75445 5202 aa5.77□□□□□ -1.49
RANBP3-209ENST00000587411 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
RANBP3-209ENST00000587411 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
RANBP3-209ENST00000587411 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
RANBP3-209ENST00000587411 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
RANBP3-209ENST00000587411 KMT2DO14686 5537 aa5.63□□□□□ -1.51
RANBP3-209ENST00000587411 MT1LQ93083 61 aa5.6□□□□□ -1.51
RANBP3-209ENST00000587411 MT1EP04732 61 aa5.55□□□□□ -1.52
RANBP3-209ENST00000587411 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms