RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 EEA1Q15075 1411 aa-0.57□□□□□ -2.5
RIOK3-211ENST00000584992 LAMA3Q16787 3333 aa-0.58□□□□□ -2.5
RIOK3-211ENST00000584992 LAMA2P24043 3122 aaKnown RBP-0.58□□□□□ -2.5
RIOK3-211ENST00000584992 USP9XQ93008 2570 aaPredicted RBP-0.58□□□□□ -2.5
RIOK3-211ENST00000584992 IGIPA6NJ69 53 aa-0.59□□□□□ -2.5
RIOK3-211ENST00000584992 M0QZ58 72 aa-0.59□□□□□ -2.5
RIOK3-211ENST00000584992 ABRACLQ9P1F3 81 aa-0.59□□□□□ -2.5
RIOK3-211ENST00000584992 RYR2Q92736 4967 aa-0.59□□□□□ -2.5
RIOK3-211ENST00000584992 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.6□□□□□ -2.5
RIOK3-211ENST00000584992 A8MTW9 85 aa-0.6□□□□□ -2.51
RIOK3-211ENST00000584992 LINC00308Q8TCZ7 52 aa-0.6□□□□□ -2.51
RIOK3-211ENST00000584992 SPENQ96T58 3664 aaKnown RBP-0.6□□□□□ -2.51
RIOK3-211ENST00000584992 PREX2Q70Z35 1606 aa-0.6□□□□□ -2.51
RIOK3-211ENST00000584992 UGGT1Q9NYU2 1555 aa-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 PLECQ15149 4684 aaKnown RBP-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 RELNP78509 3460 aa-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 RNF213Q63HN8 5207 aa-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 COL6A5A8TX70 2615 aa-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 KIF21BO75037 1637 aa-0.61□□□□□ -2.51
RIOK3-211ENST00000584992 COL12A1Q99715 3063 aa-0.62□□□□□ -2.51
RIOK3-211ENST00000584992 KAAG1Q9UBP8 84 aa-0.62□□□□□ -2.51
RIOK3-211ENST00000584992 LMO7Q8WWI1 1683 aa-0.62□□□□□ -2.51
RIOK3-211ENST00000584992 CELSR3Q9NYQ7 3312 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 CPS1P31327 1500 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 EFCAB6Q5THR3 1501 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 TEX15Q9BXT5 2789 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 SMIM27A0A1W2PRY6 76 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 ITPR1Q14643 2758 aa-0.63□□□□□ -2.51
RIOK3-211ENST00000584992 CMYA5Q8N3K9 4069 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 H0YGX0 51 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 MT1XP80297 61 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 S100ZQ8WXG8 99 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 FRYQ5TBA9 3013 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 C5orf42Q9H799 3197 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 DNAH7Q8WXX0 4024 aa-0.64□□□□□ -2.51
RIOK3-211ENST00000584992 NIPBLQ6KC79 2804 aaeCLIP-0.65□□□□□ -2.51
RIOK3-211ENST00000584992 SMIM5Q71RC9 77 aa-0.65□□□□□ -2.51
RIOK3-211ENST00000584992 SPTBN5Q9NRC6 3674 aaKnown RBP-0.66□□□□□ -2.51
RIOK3-211ENST00000584992 PRXQ9BXM0 1461 aa-0.66□□□□□ -2.51
RIOK3-211ENST00000584992 MT1EP04732 61 aa-0.66□□□□□ -2.52
RIOK3-211ENST00000584992 SPTAN1Q13813 2472 aaKnown RBP-0.66□□□□□ -2.52
RIOK3-211ENST00000584992 DNHD1Q96M86 4753 aa-0.66□□□□□ -2.52
RIOK3-211ENST00000584992 ABCA5Q8WWZ7 1642 aa-0.67□□□□□ -2.52
RIOK3-211ENST00000584992 WFDC10BQ8IUB3 73 aa-0.67□□□□□ -2.52
RIOK3-211ENST00000584992 SRCAPQ6ZRS2 3230 aa-0.67□□□□□ -2.52
RIOK3-211ENST00000584992 AGLP35573 1532 aa-0.68□□□□□ -2.52
RIOK3-211ENST00000584992 MROH2AA6NES4 1674 aa-0.68□□□□□ -2.52
RIOK3-211ENST00000584992 SMIM31A0A1B0GVY4 71 aa-0.68□□□□□ -2.52
RIOK3-211ENST00000584992 LINC01546A6NGU7 62 aa-0.68□□□□□ -2.52
RIOK3-211ENST00000584992 DYNC1H1Q14204 4646 aaKnown RBP-0.68□□□□□ -2.52
RIOK3-211ENST00000584992 MT1HL1P0DM35 61 aa-0.69□□□□□ -2.52
RIOK3-211ENST00000584992 ADCY10Q96PN6 1610 aa-0.7□□□□□ -2.52
RIOK3-211ENST00000584992 MT1LQ93083 61 aa-0.7□□□□□ -2.52
RIOK3-211ENST00000584992 DDX60Q8IY21 1712 aaKnown RBP-0.7□□□□□ -2.52
RIOK3-211ENST00000584992 SYCP2Q9BX26 1530 aa-0.7□□□□□ -2.52
RIOK3-211ENST00000584992 SPART-AS1P0CW21 52 aa-0.71□□□□□ -2.52
RIOK3-211ENST00000584992 DEFB131AP59861 70 aa-0.71□□□□□ -2.52
RIOK3-211ENST00000584992 NRXN3Q9Y4C0 1643 aa-0.71□□□□□ -2.52
RIOK3-211ENST00000584992 MYO9AB2RTY4 2548 aa-0.72□□□□□ -2.52
RIOK3-211ENST00000584992 LRBAP50851 2863 aa-0.72□□□□□ -2.52
RIOK3-211ENST00000584992 MT1GP13640 62 aa-0.72□□□□□ -2.52
RIOK3-211ENST00000584992 PLNP26678 52 aa-0.72□□□□□ -2.52
RIOK3-211ENST00000584992 DNAH17Q9UFH2 4485 aa-0.72□□□□□ -2.52
RIOK3-211ENST00000584992 ERICH3Q5RHP9 1530 aa-0.73□□□□□ -2.53
RIOK3-211ENST00000584992 ADGRG4Q8IZF6 3080 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 IQGAP1P46940 1657 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 DNAH10Q8IVF4 4471 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 MGAQ8IWI9 3026 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 TRRAPQ9Y4A5 3859 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 ABCC8Q09428 1581 aa-0.74□□□□□ -2.53
RIOK3-211ENST00000584992 CHD7Q9P2D1 2997 aa-0.75□□□□□ -2.53
RIOK3-211ENST00000584992 MT1MQ8N339 61 aa-0.75□□□□□ -2.53
RIOK3-211ENST00000584992 CSMD1Q96PZ7 3565 aa-0.76□□□□□ -2.53
RIOK3-211ENST00000584992 MT2AP02795 61 aa-0.76□□□□□ -2.53
RIOK3-211ENST00000584992 EYSQ5T1H1 3165 aa-0.77□□□□□ -2.53
RIOK3-211ENST00000584992 TFF3Q07654 80 aa-0.77□□□□□ -2.53
RIOK3-211ENST00000584992 CLTCL1P53675 1640 aa-0.78□□□□□ -2.53
RIOK3-211ENST00000584992 FANCD2Q9BXW9 1451 aa-0.78□□□□□ -2.53
RIOK3-211ENST00000584992 POLR2KP53803 58 aaKnown RBP-0.78□□□□□ -2.53
RIOK3-211ENST00000584992 DNAH5Q8TE73 4624 aa-0.78□□□□□ -2.53
RIOK3-211ENST00000584992 MT1BP07438 61 aa-0.79□□□□□ -2.54
RIOK3-211ENST00000584992 SMIM2Q9BVW6 85 aa-0.79□□□□□ -2.54
RIOK3-211ENST00000584992 CMC2Q9NRP2 79 aa-0.79□□□□□ -2.54
RIOK3-211ENST00000584992 ABCA13Q86UQ4 5058 aa-0.79□□□□□ -2.54
RIOK3-211ENST00000584992 TRPM2O94759 1503 aa-0.8□□□□□ -2.54
RIOK3-211ENST00000584992 CFAP46Q8IYW2 2715 aa-0.8□□□□□ -2.54
RIOK3-211ENST00000584992 SMG1Q96Q15 3661 aaKnown RBP-0.81□□□□□ -2.54
RIOK3-211ENST00000584992 NFAT5O94916 1531 aa-0.82□□□□□ -2.54
RIOK3-211ENST00000584992 LEAP2Q969E1 77 aa-0.82□□□□□ -2.54
RIOK3-211ENST00000584992 CEP295Q9C0D2 2601 aa-0.82□□□□□ -2.54
RIOK3-211ENST00000584992 DEFB4AO15263 64 aa-0.83□□□□□ -2.54
RIOK3-211ENST00000584992 KRTAP20-1Q3LI63 56 aa-0.83□□□□□ -2.54
RIOK3-211ENST00000584992 DMXL2Q8TDJ6 3036 aa-0.86□□□□□ -2.55
RIOK3-211ENST00000584992 ZFHX4Q86UP3 3567 aa-0.86□□□□□ -2.55
RIOK3-211ENST00000584992 DEFB136Q30KP8 78 aa-0.86□□□□□ -2.55
RIOK3-211ENST00000584992 TLN1Q9Y490 2541 aaKnown RBP-0.87□□□□□ -2.55
RIOK3-211ENST00000584992 CSMD2Q7Z408 3487 aa-0.88□□□□□ -2.55
RIOK3-211ENST00000584992 NDUFA1O15239 70 aa-0.89□□□□□ -2.55
RIOK3-211ENST00000584992 ATMQ13315 3056 aa-0.9□□□□□ -2.55
RIOK3-211ENST00000584992 ITPR2Q14571 2701 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms