RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	COX7B	P24311	80 aa		0.3	□□□□□ -2.36
NUP85-222	ENST00000583569	ATP5EP2	Q5VTU8	51 aa		0.3	□□□□□ -2.36
NUP85-222	ENST00000583569	WFDC9	Q8NEX5	89 aa		0.3	□□□□□ -2.36
NUP85-222	ENST00000583569	USMG5	Q96IX5	58 aa		0.3	□□□□□ -2.36
NUP85-222	ENST00000583569	SMCO4	Q9NRQ5	59 aa		0.3	□□□□□ -2.36
NUP85-222	ENST00000583569	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	CPSF4L	A6NMK7	179 aa	Known RBP	0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	LOC730098	B7Z3J9	87 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569		I3L3M4	83 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	NDUFB1	O75438	58 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	IFI6	P09912	130 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	SMIM13	P0DJ93	91 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	HMGA1	P17096	107 aa	Known RBP	0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	SPRR1B	P22528	89 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	IFI27	P40305	119 aa	Predicted RBP	0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	DEFB124	Q8NES8	71 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	BCOR	Q6W2J9	1755 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569	CD163L1	Q9NR16	1453 aa		0.29	□□□□□ -2.36
NUP85-222	ENST00000583569		A0A087WXM4	84 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	UMAD1	C9J7I0	102 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	PDCD5	O14737	125 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	COX8A	P10176	69 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	DEFA5	Q01523	94 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	S100Z	Q8WXG8	99 aa		0.28	□□□□□ -2.36
NUP85-222	ENST00000583569	SMIM31	A0A1B0GVY4	71 aa		0.27	□□□□□ -2.37
NUP85-222	ENST00000583569	NREP	Q16612	68 aa		0.27	□□□□□ -2.37
NUP85-222	ENST00000583569	DEFB105A	Q8NG35	78 aa		0.27	□□□□□ -2.37
NUP85-222	ENST00000583569	MRPL34	Q9BQ48	92 aa	Known RBP	0.27	□□□□□ -2.37
NUP85-222	ENST00000583569	APLN	Q9ULZ1	77 aa		0.27	□□□□□ -2.37
NUP85-222	ENST00000583569	RPL38	P63173	70 aa	Known RBP	0.26	□□□□□ -2.37
NUP85-222	ENST00000583569	SERF2	P84101	59 aa		0.26	□□□□□ -2.37
NUP85-222	ENST00000583569	HEPN1	Q6WQI6	88 aa		0.26	□□□□□ -2.37
NUP85-222	ENST00000583569	FAM208A	Q9UK61	1670 aa	Known RBP	0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	CDC42BPG	Q6DT37	1551 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	ANKRD50	Q9ULJ7	1429 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569		A0A087WWC5	75 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	CCL22	O00626	93 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	KLK9	Q2XQG4	91 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	H1FX-AS1	Q4G0G2	97 aa		0.25	□□□□□ -2.37
NUP85-222	ENST00000583569	LINC01549	A6NIU2	74 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	SNRPGP15	A8MWD9	76 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569		H3BVH4	76 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569		K7EMI3	77 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	NDUFA4	O00483	81 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	MRPL33	O75394	65 aa	Known RBP	0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	NMES1	Q9C002	83 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	GNG13	Q9P2W3	67 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	HILPDA	Q9Y5L2	63 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569	ABCA9	Q8IUA7	1624 aa		0.24	□□□□□ -2.37
NUP85-222	ENST00000583569		H0YGX0	51 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	SPINK4	O60575	86 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	ATXN8	Q156A1	80 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	NCBP2-AS2	Q69YL0	99 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	TOMM5	Q8N4H5	51 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	UBL5	Q9BZL1	73 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	CDKN2A-AS1	Q9UH64	79 aa		0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	TOP2A	P11388	1531 aa	Known RBP	0.23	□□□□□ -2.37
NUP85-222	ENST00000583569	C4B	P0C0L5	1744 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	NDUFA3	O95167	84 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	SFTA3	P0C7M3	94 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	C3orf79	P0CE67	100 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	PLN	P26678	52 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	FCER1G	P30273	86 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	COX6B2	Q6YFQ2	88 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	CMC2	Q9NRP2	79 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	ABRACL	Q9P1F3	81 aa		0.22	□□□□□ -2.37
NUP85-222	ENST00000583569	SMIM27	A0A1W2PRY6	76 aa		0.21	□□□□□ -2.38
NUP85-222	ENST00000583569	ENHO	Q6UWT2	76 aa		0.21	□□□□□ -2.38
NUP85-222	ENST00000583569	WFDC13	Q8IUB5	93 aa		0.21	□□□□□ -2.38
NUP85-222	ENST00000583569	TMEM167B	Q9NRX6	74 aa		0.21	□□□□□ -2.38
NUP85-222	ENST00000583569	DEFB131B	A0A096LNP1	70 aa		0.2	□□□□□ -2.38
NUP85-222	ENST00000583569	ETDC	A0A1B0GVM5	59 aa		0.2	□□□□□ -2.38
NUP85-222	ENST00000583569		H3BUA1	57 aa		0.2	□□□□□ -2.38
NUP85-222	ENST00000583569	SNRPG	P62308	76 aa	Known RBP	0.2	□□□□□ -2.38
NUP85-222	ENST00000583569	DEFB114	Q30KQ6	69 aa		0.2	□□□□□ -2.38
NUP85-222	ENST00000583569	KCNQ1DN	Q9H478	68 aa		0.2	□□□□□ -2.38
NUP85-222	ENST00000583569		H0YGG7	62 aa		0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	LINC00158	P58513	81 aa		0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	DEFB131A	P59861	70 aa		0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	SMIM2	Q9BVW6	85 aa		0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	NOP10	Q9NPE3	64 aa	Known RBP	0.19	□□□□□ -2.38
NUP85-222	ENST00000583569		Q9Y3F1	56 aa		0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.19	□□□□□ -2.38
NUP85-222	ENST00000583569	ABCA10	Q8WWZ4	1543 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	SYCP2	Q9BX26	1530 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	PRX	Q9BXM0	1461 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	LINC01546	A6NGU7	62 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	IGIP	A6NJ69	53 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569		A8MTW9	85 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	LYNX1	G3V0Z9	82 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569		H0YAA0	97 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569		M0R1W7	72 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	PRM1	P04553	51 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	IAPP	P10997	89 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	CRIP1	P50238	77 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	MT1H	P80294	61 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	MINOS1	Q5TGZ0	78 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	LINC00308	Q8TCZ7	52 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	DUOX1	Q9NRD9	1551 aa		0.18	□□□□□ -2.38
NUP85-222	ENST00000583569	IGLV5-48	A0A075B6I7	105 aa		0.17	□□□□□ -2.38

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