RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
LIMS2-218ENST00000582671 MT1BP07438 61 aa8.41□□□□□ -1.06
LIMS2-218ENST00000582671 KLKP1Q107X0 134 aa8.4□□□□□ -1.06
LIMS2-218ENST00000582671 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
LIMS2-218ENST00000582671 LINC00208Q96KT6 92 aa8.39□□□□□ -1.07
LIMS2-218ENST00000582671 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
LIMS2-218ENST00000582671 Q5VV11 94 aa8.34□□□□□ -1.07
LIMS2-218ENST00000582671 J3QR89 54 aa8.31□□□□□ -1.08
LIMS2-218ENST00000582671 MP68P56378 58 aa8.31□□□□□ -1.08
LIMS2-218ENST00000582671 NDUFC1O43677 76 aa8.3□□□□□ -1.08
LIMS2-218ENST00000582671 A8MUN3 132 aa8.29□□□□□ -1.08
LIMS2-218ENST00000582671 IMUPQ9GZP8 106 aa8.28□□□□□ -1.08
LIMS2-218ENST00000582671 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
LIMS2-218ENST00000582671 A6NN06 94 aa8.24□□□□□ -1.09
LIMS2-218ENST00000582671 H0YAA0 97 aa8.24□□□□□ -1.09
LIMS2-218ENST00000582671 H3BPC8 53 aa8.19□□□□□ -1.1
LIMS2-218ENST00000582671 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
LIMS2-218ENST00000582671 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
LIMS2-218ENST00000582671 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
LIMS2-218ENST00000582671 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
LIMS2-218ENST00000582671 DMAC1Q96GE9 116 aa8.11□□□□□ -1.11
LIMS2-218ENST00000582671 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
LIMS2-218ENST00000582671 K7ERU9 68 aa8.02□□□□□ -1.13
LIMS2-218ENST00000582671 P0C880 135 aa8.02□□□□□ -1.13
LIMS2-218ENST00000582671 TRAV7A0A075B6U4 112 aa7.98□□□□□ -1.13
LIMS2-218ENST00000582671 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
LIMS2-218ENST00000582671 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
LIMS2-218ENST00000582671 NEBP20929 6669 aa7.94□□□□□ -1.14
LIMS2-218ENST00000582671 R4GN34 69 aa7.93□□□□□ -1.14
LIMS2-218ENST00000582671 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
LIMS2-218ENST00000582671 ACYP2P14621 99 aa7.9□□□□□ -1.14
LIMS2-218ENST00000582671 M0QZ58 72 aa7.89□□□□□ -1.15
LIMS2-218ENST00000582671 MT1XP80297 61 aa7.88□□□□□ -1.15
LIMS2-218ENST00000582671 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
LIMS2-218ENST00000582671 KRTAP5-9P26371 169 aa7.84□□□□□ -1.15
LIMS2-218ENST00000582671 SNURFQ9Y675 71 aa7.84□□□□□ -1.15
LIMS2-218ENST00000582671 MUC12Q9UKN1 5478 aa7.83□□□□□ -1.16
LIMS2-218ENST00000582671 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
LIMS2-218ENST00000582671 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
LIMS2-218ENST00000582671 SPTSSBQ8NFR3 76 aa7.75□□□□□ -1.17
LIMS2-218ENST00000582671 CHKB-CPT1BH3BT56 60 aa7.73□□□□□ -1.17
LIMS2-218ENST00000582671 SERP2Q8N6R1 65 aa7.72□□□□□ -1.17
LIMS2-218ENST00000582671 KMT2DO14686 5537 aa7.72□□□□□ -1.17
LIMS2-218ENST00000582671 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
LIMS2-218ENST00000582671 KRTAP12-2P59991 146 aa7.65□□□□□ -1.18
LIMS2-218ENST00000582671 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
LIMS2-218ENST00000582671 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
LIMS2-218ENST00000582671 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
LIMS2-218ENST00000582671 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
LIMS2-218ENST00000582671 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
LIMS2-218ENST00000582671 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
LIMS2-218ENST00000582671 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
LIMS2-218ENST00000582671 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
LIMS2-218ENST00000582671 COA5Q86WW8 74 aa7.51□□□□□ -1.21
LIMS2-218ENST00000582671 COX7CP15954 63 aa7.49□□□□□ -1.21
LIMS2-218ENST00000582671 SPRR2EP22531 72 aa7.48□□□□□ -1.21
LIMS2-218ENST00000582671 SPRR2BP35325 72 aa7.48□□□□□ -1.21
LIMS2-218ENST00000582671 SPRR2AP35326 72 aa7.48□□□□□ -1.21
LIMS2-218ENST00000582671 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
LIMS2-218ENST00000582671 CYSTM1Q9H1C7 97 aa7.45□□□□□ -1.22
LIMS2-218ENST00000582671 LCE1AQ5T7P2 110 aa7.41□□□□□ -1.22
LIMS2-218ENST00000582671 H7BZZ5 65 aa7.4□□□□□ -1.22
LIMS2-218ENST00000582671 KRTAP2-3P0C7H8 128 aa7.37□□□□□ -1.23
LIMS2-218ENST00000582671 KRTAP2-4Q9BYR9 128 aa7.37□□□□□ -1.23
LIMS2-218ENST00000582671 SERP1Q9Y6X1 66 aa7.31□□□□□ -1.24
LIMS2-218ENST00000582671 SEC61GP60059 68 aa7.3□□□□□ -1.24
LIMS2-218ENST00000582671 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
LIMS2-218ENST00000582671 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
LIMS2-218ENST00000582671 A0A0D9SG42 100 aa7.25□□□□□ -1.25
LIMS2-218ENST00000582671 SPRR2DP22532 72 aa7.23□□□□□ -1.25
LIMS2-218ENST00000582671 A0A1B0GU33 70 aa7.22□□□□□ -1.25
LIMS2-218ENST00000582671 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
LIMS2-218ENST00000582671 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
LIMS2-218ENST00000582671 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
LIMS2-218ENST00000582671 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
LIMS2-218ENST00000582671 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
LIMS2-218ENST00000582671 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
LIMS2-218ENST00000582671 A0A1B0GU69 56 aa7.11□□□□□ -1.27
LIMS2-218ENST00000582671 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
LIMS2-218ENST00000582671 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
LIMS2-218ENST00000582671 A8MU10 97 aa7.02□□□□□ -1.29
LIMS2-218ENST00000582671 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
LIMS2-218ENST00000582671 MT1EP04732 61 aa6.98□□□□□ -1.29
LIMS2-218ENST00000582671 ATP5EP56381 51 aaPredicted RBP6.95□□□□□ -1.3
LIMS2-218ENST00000582671 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
LIMS2-218ENST00000582671 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.3
LIMS2-218ENST00000582671 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
LIMS2-218ENST00000582671 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
LIMS2-218ENST00000582671 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
LIMS2-218ENST00000582671 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
LIMS2-218ENST00000582671 TMEM258P61165 79 aa6.81□□□□□ -1.32
LIMS2-218ENST00000582671 DSTQ03001 7570 aaKnown RBP6.77□□□□□ -1.33
LIMS2-218ENST00000582671 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
LIMS2-218ENST00000582671 TNP1P09430 55 aa6.73□□□□□ -1.33
LIMS2-218ENST00000582671 MT1GP13640 62 aa6.73□□□□□ -1.33
LIMS2-218ENST00000582671 MT1LQ93083 61 aa6.67□□□□□ -1.34
LIMS2-218ENST00000582671 UQCR11O14957 56 aa6.66□□□□□ -1.34
LIMS2-218ENST00000582671 MT1MQ8N339 61 aa6.64□□□□□ -1.35
LIMS2-218ENST00000582671 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
LIMS2-218ENST00000582671 KRTAP4-9Q9BYQ8 210 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms