RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 NHP2Q9NX24 153 aaKnown RBP3.59□□□□□ -1.83
CDK5RAP3-221ENST00000581662 TCL1BO95988 128 aa3.58□□□□□ -1.84
CDK5RAP3-221ENST00000581662 DSCR10P59022 87 aa3.58□□□□□ -1.84
CDK5RAP3-221ENST00000581662 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
CDK5RAP3-221ENST00000581662 NDUFC1O43677 76 aa3.57□□□□□ -1.84
CDK5RAP3-221ENST00000581662 NDUFS5O43920 106 aa3.57□□□□□ -1.84
CDK5RAP3-221ENST00000581662 MT1BP07438 61 aa3.57□□□□□ -1.84
CDK5RAP3-221ENST00000581662 PSMB2P49721 201 aa3.56□□□□□ -1.84
CDK5RAP3-221ENST00000581662 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
CDK5RAP3-221ENST00000581662 A8MWP4 228 aa3.55□□□□□ -1.84
CDK5RAP3-221ENST00000581662 ATXN8Q156A1 80 aa3.55□□□□□ -1.84
CDK5RAP3-221ENST00000581662 Q6JHZ5 121 aa3.55□□□□□ -1.84
CDK5RAP3-221ENST00000581662 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
CDK5RAP3-221ENST00000581662 FXYD2P54710 66 aa3.54□□□□□ -1.84
CDK5RAP3-221ENST00000581662 HIST1H4AP62805 103 aaKnown RBP3.54□□□□□ -1.84
CDK5RAP3-221ENST00000581662 HIST1H4GQ99525 98 aa3.54□□□□□ -1.84
CDK5RAP3-221ENST00000581662 A0A1W2PNM2 257 aa3.53□□□□□ -1.84
CDK5RAP3-221ENST00000581662 A0A0B4J2C4 111 aa3.52□□□□□ -1.85
CDK5RAP3-221ENST00000581662 hADV29S1A0JD25 119 aa3.52□□□□□ -1.85
CDK5RAP3-221ENST00000581662 COX6CP09669 75 aa3.52□□□□□ -1.85
CDK5RAP3-221ENST00000581662 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
CDK5RAP3-221ENST00000581662 LST1O00453 97 aa3.51□□□□□ -1.85
CDK5RAP3-221ENST00000581662 DSCR8Q96T75 97 aa3.51□□□□□ -1.85
CDK5RAP3-221ENST00000581662 A0A087WSZ3 146 aa3.5□□□□□ -1.85
CDK5RAP3-221ENST00000581662 TRAV13-2A0A0B4J235 113 aa3.5□□□□□ -1.85
CDK5RAP3-221ENST00000581662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.5□□□□□ -1.85
CDK5RAP3-221ENST00000581662 K7ERJ3 54 aa3.49□□□□□ -1.85
CDK5RAP3-221ENST00000581662 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
CDK5RAP3-221ENST00000581662 F8WEM9 126 aa3.48□□□□□ -1.85
CDK5RAP3-221ENST00000581662 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
CDK5RAP3-221ENST00000581662 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
CDK5RAP3-221ENST00000581662 PRO1854Q9UHT4 67 aa3.48□□□□□ -1.85
CDK5RAP3-221ENST00000581662 CXCL6P80162 114 aa3.46□□□□□ -1.86
CDK5RAP3-221ENST00000581662 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
CDK5RAP3-221ENST00000581662 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
CDK5RAP3-221ENST00000581662 Q5VV11 94 aa3.45□□□□□ -1.86
CDK5RAP3-221ENST00000581662 Q6ZVQ6 151 aa3.45□□□□□ -1.86
CDK5RAP3-221ENST00000581662 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CDK5RAP3-221ENST00000581662 CCKP06307 115 aa3.44□□□□□ -1.86
CDK5RAP3-221ENST00000581662 RBM3P98179 157 aaKnown RBP3.44□□□□□ -1.86
CDK5RAP3-221ENST00000581662 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
CDK5RAP3-221ENST00000581662 LCA10Q71F78 164 aa3.44□□□□□ -1.86
CDK5RAP3-221ENST00000581662 C8orf87E5RJ46 101 aa3.43□□□□□ -1.86
CDK5RAP3-221ENST00000581662 LINC00313P59037 77 aa3.43□□□□□ -1.86
CDK5RAP3-221ENST00000581662 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
CDK5RAP3-221ENST00000581662 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
CDK5RAP3-221ENST00000581662 TRAV7A0A075B6U4 112 aa3.42□□□□□ -1.86
CDK5RAP3-221ENST00000581662 Q1T7F1 81 aa3.42□□□□□ -1.86
CDK5RAP3-221ENST00000581662 SPINK7P58062 85 aa3.41□□□□□ -1.86
CDK5RAP3-221ENST00000581662 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
CDK5RAP3-221ENST00000581662 H7BZZ5 65 aa3.4□□□□□ -1.87
CDK5RAP3-221ENST00000581662 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
CDK5RAP3-221ENST00000581662 IGKV4-1P06312 121 aa3.4□□□□□ -1.87
CDK5RAP3-221ENST00000581662 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
CDK5RAP3-221ENST00000581662 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
CDK5RAP3-221ENST00000581662 TRBV7-4A0A0J9YYF1 115 aa3.38□□□□□ -1.87
CDK5RAP3-221ENST00000581662 DNAL4O96015 105 aa3.38□□□□□ -1.87
CDK5RAP3-221ENST00000581662 MP68P56378 58 aa3.38□□□□□ -1.87
CDK5RAP3-221ENST00000581662 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
CDK5RAP3-221ENST00000581662 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 IGHV6-1A0A0B4J1U7 121 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 A0A1B0GW54 56 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 C20orf197Q8N268 126 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 CYP4F30PQ9H0H9 118 aa3.37□□□□□ -1.87
CDK5RAP3-221ENST00000581662 A8MUN3 132 aa3.36□□□□□ -1.87
CDK5RAP3-221ENST00000581662 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
CDK5RAP3-221ENST00000581662 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
CDK5RAP3-221ENST00000581662 PSPHP1O15172 72 aa3.34□□□□□ -1.87
CDK5RAP3-221ENST00000581662 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
CDK5RAP3-221ENST00000581662 CYSTM1Q9H1C7 97 aa3.33□□□□□ -1.88
CDK5RAP3-221ENST00000581662 H0YGX0 51 aa3.31□□□□□ -1.88
CDK5RAP3-221ENST00000581662 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
CDK5RAP3-221ENST00000581662 UBL5Q9BZL1 73 aa3.31□□□□□ -1.88
CDK5RAP3-221ENST00000581662 IGKV3D-7A0A0C4DH55 119 aa3.3□□□□□ -1.88
CDK5RAP3-221ENST00000581662 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
CDK5RAP3-221ENST00000581662 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
CDK5RAP3-221ENST00000581662 A8MU10 97 aa3.29□□□□□ -1.88
CDK5RAP3-221ENST00000581662 H3BQ85 93 aa3.29□□□□□ -1.88
CDK5RAP3-221ENST00000581662 BAALC-AS2P0C853 105 aa3.29□□□□□ -1.88
CDK5RAP3-221ENST00000581662 H1FX-AS1Q4G0G2 97 aa3.29□□□□□ -1.88
CDK5RAP3-221ENST00000581662 MMP24-AS1A0A0U1RRL7 71 aa3.28□□□□□ -1.88
CDK5RAP3-221ENST00000581662 MT4P47944 62 aa3.28□□□□□ -1.88
CDK5RAP3-221ENST00000581662 C8orf17Q9NRJ1 99 aa3.28□□□□□ -1.88
CDK5RAP3-221ENST00000581662 NDUFB1O75438 58 aa3.27□□□□□ -1.89
CDK5RAP3-221ENST00000581662 PDE6GP18545 87 aa3.27□□□□□ -1.89
CDK5RAP3-221ENST00000581662 Q5W150 140 aa3.27□□□□□ -1.89
CDK5RAP3-221ENST00000581662 hDV103S1A0JD37 113 aa3.26□□□□□ -1.89
CDK5RAP3-221ENST00000581662 Q6ZQT0 140 aa3.26□□□□□ -1.89
CDK5RAP3-221ENST00000581662 TMEM254Q8TBM7 123 aa3.25□□□□□ -1.89
CDK5RAP3-221ENST00000581662 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
CDK5RAP3-221ENST00000581662 ORMDL1Q9P0S3 153 aa3.25□□□□□ -1.89
CDK5RAP3-221ENST00000581662 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
CDK5RAP3-221ENST00000581662 HCG22E2RYF7 251 aa3.23□□□□□ -1.89
CDK5RAP3-221ENST00000581662 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
CDK5RAP3-221ENST00000581662 A0A087WVE0 104 aa3.22□□□□□ -1.89
CDK5RAP3-221ENST00000581662 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
CDK5RAP3-221ENST00000581662 CASC2Q6XLA1 102 aa3.22□□□□□ -1.89
CDK5RAP3-221ENST00000581662 MT1XP80297 61 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms