RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MT4P47944 62 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 LAMA3Q16787 3333 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 ABCA10Q8WWZ4 1543 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 CMYA5Q8N3K9 4069 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 FCER1GP30273 86 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 MT1HP80294 61 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 NCBP2-AS2Q69YL0 99 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 CLPSL2Q6UWE3 100 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 LAMA2P24043 3122 aaKnown RBP-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 PREX2Q70Z35 1606 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 CHD7Q9P2D1 2997 aa-0.24□□□□□ -2.45
SMCHD1-206ENST00000581631 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 HILPDAQ9Y5L2 63 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 GLI2P10070 1586 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 UGGT1Q9NYU2 1555 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 MAST1Q9Y2H9 1570 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 LMO7Q8WWI1 1683 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 ADGRG4Q8IZF6 3080 aa-0.25□□□□□ -2.45
SMCHD1-206ENST00000581631 MROH2AA6NES4 1674 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 ABCA5Q8WWZ7 1642 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 DNHD1Q96M86 4753 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 A0A087WWC5 75 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 LINC01549A6NIU2 74 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 A8MTW9 85 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 DEFB1P60022 68 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 NMES1Q9C002 83 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 TMEM167BQ9NRX6 74 aa-0.26□□□□□ -2.45
SMCHD1-206ENST00000581631 MGAQ8IWI9 3026 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 KIF21BO75037 1637 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 M0QY20 66 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 M0QZ58 72 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 KRTAP19-5Q3LI72 72 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 CEP295Q9C0D2 2601 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 CSMD1Q96PZ7 3565 aa-0.27□□□□□ -2.45
SMCHD1-206ENST00000581631 SFTA3P0C7M3 94 aa-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 S100ZQ8WXG8 99 aa-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 ABRACLQ9P1F3 81 aa-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 DDX60Q8IY21 1712 aaKnown RBP-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 DYNC1H1Q14204 4646 aaKnown RBP-0.28□□□□□ -2.45
SMCHD1-206ENST00000581631 EEA1Q15075 1411 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 DNAH17Q9UFH2 4485 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 M0R1W7 72 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 CFAP46Q8IYW2 2715 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 ADCY10Q96PN6 1610 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 DNAH10Q8IVF4 4471 aa-0.29□□□□□ -2.46
SMCHD1-206ENST00000581631 EYSQ5T1H1 3165 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 CSMD2Q7Z408 3487 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 H0YGX0 51 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 AGLP35573 1532 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 EFCAB6Q5THR3 1501 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 SYCP2Q9BX26 1530 aa-0.3□□□□□ -2.46
SMCHD1-206ENST00000581631 NRXN3Q9Y4C0 1643 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 ZFHX4Q86UP3 3567 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 SMIM27A0A1W2PRY6 76 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 LINC01546A6NGU7 62 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 IGIPA6NJ69 53 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 SMIM5Q71RC9 77 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 LINC00308Q8TCZ7 52 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 ITPR2Q14571 2701 aa-0.31□□□□□ -2.46
SMCHD1-206ENST00000581631 CPS1P31327 1500 aa-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 ERICH3Q5RHP9 1530 aa-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 TLN1Q9Y490 2541 aaKnown RBP-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 PRXQ9BXM0 1461 aa-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 SMR3BP02814 79 aaPredicted RBP-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 CLTCL1P53675 1640 aa-0.32□□□□□ -2.46
SMCHD1-206ENST00000581631 DMXL2Q8TDJ6 3036 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 SMIM31A0A1B0GVY4 71 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 MT1XP80297 61 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 KAAG1Q9UBP8 84 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 ABCC8Q09428 1581 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 SMG1Q96Q15 3661 aaKnown RBP-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 IQGAP1P46940 1657 aa-0.33□□□□□ -2.46
SMCHD1-206ENST00000581631 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
SMCHD1-206ENST00000581631 MT1EP04732 61 aa-0.34□□□□□ -2.46
SMCHD1-206ENST00000581631 PLNP26678 52 aa-0.34□□□□□ -2.46
SMCHD1-206ENST00000581631 DEFB131AP59861 70 aa-0.34□□□□□ -2.46
SMCHD1-206ENST00000581631 SPART-AS1P0CW21 52 aa-0.35□□□□□ -2.47
SMCHD1-206ENST00000581631 WFDC10BQ8IUB3 73 aa-0.35□□□□□ -2.47
SMCHD1-206ENST00000581631 MT1LQ93083 61 aa-0.35□□□□□ -2.47
SMCHD1-206ENST00000581631 CRYBG3Q68DQ2 2970 aa-0.35□□□□□ -2.47
SMCHD1-206ENST00000581631 DNAH5Q8TE73 4624 aa-0.36□□□□□ -2.47
SMCHD1-206ENST00000581631 FREM2Q5SZK8 3169 aa-0.36□□□□□ -2.47
SMCHD1-206ENST00000581631 FANCD2Q9BXW9 1451 aa-0.36□□□□□ -2.47
SMCHD1-206ENST00000581631 PRUNE2Q8WUY3 3088 aa-0.36□□□□□ -2.47
SMCHD1-206ENST00000581631 TRPM2O94759 1503 aa-0.37□□□□□ -2.47
SMCHD1-206ENST00000581631 MT1HL1P0DM35 61 aa-0.37□□□□□ -2.47
SMCHD1-206ENST00000581631 ATMQ13315 3056 aa-0.37□□□□□ -2.47
SMCHD1-206ENST00000581631 FRYLO94915 3013 aa-0.38□□□□□ -2.47
SMCHD1-206ENST00000581631 CMC2Q9NRP2 79 aa-0.38□□□□□ -2.47
SMCHD1-206ENST00000581631 CFAP54Q96N23 3096 aa-0.38□□□□□ -2.47
SMCHD1-206ENST00000581631 CEP250Q9BV73 2442 aa-0.4□□□□□ -2.47
SMCHD1-206ENST00000581631 POLR2KP53803 58 aaKnown RBP-0.41□□□□□ -2.48
SMCHD1-206ENST00000581631 SMIM2Q9BVW6 85 aa-0.41□□□□□ -2.48
SMCHD1-206ENST00000581631 NFAT5O94916 1531 aa-0.42□□□□□ -2.48
SMCHD1-206ENST00000581631 LEAP2Q969E1 77 aa-0.42□□□□□ -2.48
SMCHD1-206ENST00000581631 VPS13CQ709C8 3753 aa-0.42□□□□□ -2.48
SMCHD1-206ENST00000581631 DEFB136Q30KP8 78 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms