RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CUBNO60494 3623 aa0.8□□□□□ -2.28
SMG8-205ENST00000580798 SPRR2EP22531 72 aa0.8□□□□□ -2.28
SMG8-205ENST00000580798 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
SMG8-205ENST00000580798 TGP01266 2768 aa0.8□□□□□ -2.28
SMG8-205ENST00000580798 MAP1AP78559 2803 aaPredicted RBP0.8□□□□□ -2.28
SMG8-205ENST00000580798 TACC2O95359 2948 aa0.8□□□□□ -2.28
SMG8-205ENST00000580798 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
SMG8-205ENST00000580798 NBEAL2Q6ZNJ1 2754 aa0.79□□□□□ -2.28
SMG8-205ENST00000580798 CFAP46Q8IYW2 2715 aa0.79□□□□□ -2.28
SMG8-205ENST00000580798 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
SMG8-205ENST00000580798 FLNBO75369 2602 aaKnown RBP0.78□□□□□ -2.28
SMG8-205ENST00000580798 ZANQ9Y493 2812 aa0.78□□□□□ -2.29
SMG8-205ENST00000580798 CEP350Q5VT06 3117 aa0.78□□□□□ -2.29
SMG8-205ENST00000580798 DYNC2H1Q8NCM8 4307 aaKnown RBP0.77□□□□□ -2.29
SMG8-205ENST00000580798 DNAH8Q96JB1 4490 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 PRUNE2Q8WUY3 3088 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
SMG8-205ENST00000580798 MT1EP04732 61 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 TLN2Q9Y4G6 2542 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 DMXL2Q8TDJ6 3036 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 FAT2Q9NYQ8 4349 aa0.77□□□□□ -2.29
SMG8-205ENST00000580798 RELNP78509 3460 aa0.76□□□□□ -2.29
SMG8-205ENST00000580798 FLNAP21333 2647 aaKnown RBP0.76□□□□□ -2.29
SMG8-205ENST00000580798 ANK2Q01484 3957 aa0.76□□□□□ -2.29
SMG8-205ENST00000580798 PRKDCP78527 4128 aaKnown RBP0.75□□□□□ -2.29
SMG8-205ENST00000580798 CENPEQ02224 2701 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 SVEP1Q4LDE5 3571 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 ZZEF1O43149 2961 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 ANK3Q12955 4377 aaKnown RBP0.75□□□□□ -2.29
SMG8-205ENST00000580798 TRIOO75962 3097 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 LAMA5O15230 3695 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 NBEAQ8NFP9 2946 aa0.75□□□□□ -2.29
SMG8-205ENST00000580798 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
SMG8-205ENST00000580798 ATMQ13315 3056 aa0.74□□□□□ -2.29
SMG8-205ENST00000580798 DOPEY1Q5JWR5 2465 aa0.74□□□□□ -2.29
SMG8-205ENST00000580798 C5orf42Q9H799 3197 aa0.74□□□□□ -2.29
SMG8-205ENST00000580798 CSMD1Q96PZ7 3565 aa0.74□□□□□ -2.29
SMG8-205ENST00000580798 SZT2Q5T011 3432 aa0.74□□□□□ -2.29
SMG8-205ENST00000580798 HIVEP1P15822 2718 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 FASNP49327 2511 aaKnown RBP0.73□□□□□ -2.29
SMG8-205ENST00000580798 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 MT1LQ93083 61 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 DNAH3Q8TD57 4116 aa0.73□□□□□ -2.29
SMG8-205ENST00000580798 MGAM2Q2M2H8 2515 aa0.72□□□□□ -2.29
SMG8-205ENST00000580798 DNAH12Q6ZR08 3092 aa0.72□□□□□ -2.29
SMG8-205ENST00000580798 MT1HP80294 61 aa0.72□□□□□ -2.29
SMG8-205ENST00000580798 LRBAP50851 2863 aa0.72□□□□□ -2.29
SMG8-205ENST00000580798 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
SMG8-205ENST00000580798 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
SMG8-205ENST00000580798 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
SMG8-205ENST00000580798 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.3
SMG8-205ENST00000580798 SPRR2GQ9BYE4 73 aa0.71□□□□□ -2.3
SMG8-205ENST00000580798 BOD1L1Q8NFC6 3051 aa0.71□□□□□ -2.3
SMG8-205ENST00000580798 MKI67P46013 3256 aaKnown RBP0.7□□□□□ -2.3
SMG8-205ENST00000580798 ITPR2Q14571 2701 aa0.7□□□□□ -2.3
SMG8-205ENST00000580798 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
SMG8-205ENST00000580798 LAMA3Q16787 3333 aa0.7□□□□□ -2.3
SMG8-205ENST00000580798 MXRA5Q9NR99 2828 aa0.69□□□□□ -2.3
SMG8-205ENST00000580798 KALRNO60229 2985 aa0.69□□□□□ -2.3
SMG8-205ENST00000580798 HTTP42858 3142 aa0.69□□□□□ -2.3
SMG8-205ENST00000580798 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
SMG8-205ENST00000580798 PKHD1L1Q86WI1 4243 aa0.69□□□□□ -2.3
SMG8-205ENST00000580798 HSPG2P98160 4391 aa0.68□□□□□ -2.3
SMG8-205ENST00000580798 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
SMG8-205ENST00000580798 FREM2Q5SZK8 3169 aa0.68□□□□□ -2.3
SMG8-205ENST00000580798 SPTBN5Q9NRC6 3674 aaKnown RBP0.67□□□□□ -2.3
SMG8-205ENST00000580798 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
SMG8-205ENST00000580798 LAMA1P25391 3075 aa0.66□□□□□ -2.3
SMG8-205ENST00000580798 DNAH7Q8WXX0 4024 aa0.66□□□□□ -2.3
SMG8-205ENST00000580798 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
SMG8-205ENST00000580798 LRP1Q07954 4544 aaKnown RBP0.66□□□□□ -2.3
SMG8-205ENST00000580798 DCHS1Q96JQ0 3298 aa0.66□□□□□ -2.3
SMG8-205ENST00000580798 CEP295Q9C0D2 2601 aa0.66□□□□□ -2.3
SMG8-205ENST00000580798 SPTAN1Q13813 2472 aaKnown RBP0.65□□□□□ -2.3
SMG8-205ENST00000580798 SMG1Q96Q15 3661 aaKnown RBP0.65□□□□□ -2.31
SMG8-205ENST00000580798 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
SMG8-205ENST00000580798 GPR98Q8WXG9 6306 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 PKD1P98161 4303 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 ADGRG4Q8IZF6 3080 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 CMYA5Q8N3K9 4069 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 MAST4O15021 2626 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
SMG8-205ENST00000580798 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
SMG8-205ENST00000580798 TLN1Q9Y490 2541 aaKnown RBP0.63□□□□□ -2.31
SMG8-205ENST00000580798 LPAP08519 4548 aa0.62□□□□□ -2.31
SMG8-205ENST00000580798 DMDP11532 3685 aa0.62□□□□□ -2.31
SMG8-205ENST00000580798 DNAH6Q9C0G6 4158 aa0.62□□□□□ -2.31
SMG8-205ENST00000580798 WDFY4Q6ZS81 3184 aa0.62□□□□□ -2.31
SMG8-205ENST00000580798 DNAH9Q9NYC9 4486 aa0.62□□□□□ -2.31
SMG8-205ENST00000580798 IGSF10Q6WRI0 2623 aa0.61□□□□□ -2.31
SMG8-205ENST00000580798 MT1XP80297 61 aa0.61□□□□□ -2.31
SMG8-205ENST00000580798 CSMD2Q7Z408 3487 aa0.61□□□□□ -2.31
SMG8-205ENST00000580798 XIRP2A4UGR9 3374 aa0.61□□□□□ -2.31
SMG8-205ENST00000580798 PLECQ15149 4684 aaKnown RBP0.6□□□□□ -2.31
SMG8-205ENST00000580798 VPS13AQ96RL7 3174 aa0.6□□□□□ -2.31
SMG8-205ENST00000580798 APOBP04114 4563 aaKnown RBP0.6□□□□□ -2.31
SMG8-205ENST00000580798 CFAP47Q6ZTR5 3102 aa0.6□□□□□ -2.31
SMG8-205ENST00000580798 FAT1Q14517 4588 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms