RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
PCAT18-201ENST00000579458 HSPG2P98160 4391 aa4.67□□□□□ -1.66
PCAT18-201ENST00000579458 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
PCAT18-201ENST00000579458 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
PCAT18-201ENST00000579458 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
PCAT18-201ENST00000579458 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
PCAT18-201ENST00000579458 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
PCAT18-201ENST00000579458 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
PCAT18-201ENST00000579458 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
PCAT18-201ENST00000579458 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
PCAT18-201ENST00000579458 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
PCAT18-201ENST00000579458 WFDC10BQ8IUB3 73 aa4.62□□□□□ -1.67
PCAT18-201ENST00000579458 C6orf48Q9UBA6 75 aa4.61□□□□□ -1.67
PCAT18-201ENST00000579458 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
PCAT18-201ENST00000579458 M0QY20 66 aa4.56□□□□□ -1.68
PCAT18-201ENST00000579458 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
PCAT18-201ENST00000579458 LINC01556Q5JQF7 62 aa4.56□□□□□ -1.68
PCAT18-201ENST00000579458 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
PCAT18-201ENST00000579458 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
PCAT18-201ENST00000579458 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
PCAT18-201ENST00000579458 FAT1Q14517 4588 aa4.54□□□□□ -1.68
PCAT18-201ENST00000579458 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
PCAT18-201ENST00000579458 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
PCAT18-201ENST00000579458 COX6A2Q02221 97 aa4.54□□□□□ -1.68
PCAT18-201ENST00000579458 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
PCAT18-201ENST00000579458 Q6ZSA8 131 aa4.53□□□□□ -1.68
PCAT18-201ENST00000579458 VPS13BQ7Z7G8 4022 aa4.51□□□□□ -1.69
PCAT18-201ENST00000579458 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
PCAT18-201ENST00000579458 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
PCAT18-201ENST00000579458 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
PCAT18-201ENST00000579458 Q5VSD8 79 aa4.47□□□□□ -1.69
PCAT18-201ENST00000579458 MYCBP2O75592 4640 aa4.46□□□□□ -1.69
PCAT18-201ENST00000579458 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
PCAT18-201ENST00000579458 HERC1Q15751 4861 aa4.45□□□□□ -1.7
PCAT18-201ENST00000579458 SRRM2Q9UQ35 2752 aaKnown RBP4.44□□□□□ -1.7
PCAT18-201ENST00000579458 CLPSL2Q6UWE3 100 aa4.43□□□□□ -1.7
PCAT18-201ENST00000579458 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
PCAT18-201ENST00000579458 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
PCAT18-201ENST00000579458 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
PCAT18-201ENST00000579458 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
PCAT18-201ENST00000579458 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
PCAT18-201ENST00000579458 DMBT1Q9UGM3 2413 aaPredicted RBP4.37□□□□□ -1.71
PCAT18-201ENST00000579458 FAT3Q8TDW7 4589 aa4.37□□□□□ -1.71
PCAT18-201ENST00000579458 IGLV5-48A0A075B6I7 105 aa4.36□□□□□ -1.71
PCAT18-201ENST00000579458 COX6B2Q6YFQ2 88 aa4.35□□□□□ -1.71
PCAT18-201ENST00000579458 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
PCAT18-201ENST00000579458 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
PCAT18-201ENST00000579458 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
PCAT18-201ENST00000579458 A0A096LNI7 61 aa4.28□□□□□ -1.72
PCAT18-201ENST00000579458 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
PCAT18-201ENST00000579458 TNXBP22105 4242 aa4.27□□□□□ -1.73
PCAT18-201ENST00000579458 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
PCAT18-201ENST00000579458 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
PCAT18-201ENST00000579458 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
PCAT18-201ENST00000579458 SPRR1AP35321 89 aa4.24□□□□□ -1.73
PCAT18-201ENST00000579458 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
PCAT18-201ENST00000579458 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
PCAT18-201ENST00000579458 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.74
PCAT18-201ENST00000579458 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
PCAT18-201ENST00000579458 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
PCAT18-201ENST00000579458 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
PCAT18-201ENST00000579458 LRP2P98164 4655 aa4.15□□□□□ -1.75
PCAT18-201ENST00000579458 MT3P25713 68 aa4.14□□□□□ -1.75
PCAT18-201ENST00000579458 PRLHP81277 87 aa4.14□□□□□ -1.75
PCAT18-201ENST00000579458 LPAP08519 4548 aa4.11□□□□□ -1.75
PCAT18-201ENST00000579458 RNF213Q63HN8 5207 aa4.09□□□□□ -1.76
PCAT18-201ENST00000579458 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
PCAT18-201ENST00000579458 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
PCAT18-201ENST00000579458 SPRR1BP22528 89 aa4.02□□□□□ -1.77
PCAT18-201ENST00000579458 KRTAP13-1Q8IUC0 172 aa4.02□□□□□ -1.77
PCAT18-201ENST00000579458 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
PCAT18-201ENST00000579458 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
PCAT18-201ENST00000579458 SPINK1P00995 79 aa3.99□□□□□ -1.77
PCAT18-201ENST00000579458 MUC2Q02817 5179 aa3.98□□□□□ -1.77
PCAT18-201ENST00000579458 S4R3F8 94 aa3.97□□□□□ -1.77
PCAT18-201ENST00000579458 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
PCAT18-201ENST00000579458 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
PCAT18-201ENST00000579458 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
PCAT18-201ENST00000579458 A0A0D9SG42 100 aa3.87□□□□□ -1.79
PCAT18-201ENST00000579458 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
PCAT18-201ENST00000579458 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.8
PCAT18-201ENST00000579458 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
PCAT18-201ENST00000579458 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
PCAT18-201ENST00000579458 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
PCAT18-201ENST00000579458 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
PCAT18-201ENST00000579458 KRTAP4-1Q9BYQ7 146 aa3.78□□□□□ -1.8
PCAT18-201ENST00000579458 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
PCAT18-201ENST00000579458 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
PCAT18-201ENST00000579458 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
PCAT18-201ENST00000579458 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
PCAT18-201ENST00000579458 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
PCAT18-201ENST00000579458 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
PCAT18-201ENST00000579458 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
PCAT18-201ENST00000579458 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
PCAT18-201ENST00000579458 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
PCAT18-201ENST00000579458 MT1HP80294 61 aa3.61□□□□□ -1.83
PCAT18-201ENST00000579458 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
PCAT18-201ENST00000579458 LCE3BQ5TA77 95 aa3.6□□□□□ -1.83
PCAT18-201ENST00000579458 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
PCAT18-201ENST00000579458 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms