RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
EPB41L3-214ENST00000578618 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
EPB41L3-214ENST00000578618 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
EPB41L3-214ENST00000578618 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
EPB41L3-214ENST00000578618 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
EPB41L3-214ENST00000578618 DNAH1Q9P2D7 4330 aa3.98□□□□□ -1.77
EPB41L3-214ENST00000578618 DNAH7Q8WXX0 4024 aa3.97□□□□□ -1.77
EPB41L3-214ENST00000578618 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
EPB41L3-214ENST00000578618 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
EPB41L3-214ENST00000578618 PRKDCP78527 4128 aaKnown RBP3.9□□□□□ -1.78
EPB41L3-214ENST00000578618 LYSTQ99698 3801 aa3.9□□□□□ -1.79
EPB41L3-214ENST00000578618 DNHD1Q96M86 4753 aa3.89□□□□□ -1.79
EPB41L3-214ENST00000578618 VPS13DQ5THJ4 4388 aa3.88□□□□□ -1.79
EPB41L3-214ENST00000578618 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.79
EPB41L3-214ENST00000578618 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
EPB41L3-214ENST00000578618 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
EPB41L3-214ENST00000578618 STARD9Q9P2P6 4700 aa3.8□□□□□ -1.8
EPB41L3-214ENST00000578618 FRAS1Q86XX4 4008 aa3.8□□□□□ -1.8
EPB41L3-214ENST00000578618 DNAH17Q9UFH2 4485 aa3.79□□□□□ -1.8
EPB41L3-214ENST00000578618 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
EPB41L3-214ENST00000578618 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
EPB41L3-214ENST00000578618 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
EPB41L3-214ENST00000578618 DNAH8Q96JB1 4490 aa3.75□□□□□ -1.81
EPB41L3-214ENST00000578618 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
EPB41L3-214ENST00000578618 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
EPB41L3-214ENST00000578618 KMT2AQ03164 3969 aa3.7□□□□□ -1.82
EPB41L3-214ENST00000578618 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
EPB41L3-214ENST00000578618 PKD1P98161 4303 aa3.68□□□□□ -1.82
EPB41L3-214ENST00000578618 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
EPB41L3-214ENST00000578618 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
EPB41L3-214ENST00000578618 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
EPB41L3-214ENST00000578618 HYDINQ4G0P3 5121 aa3.65□□□□□ -1.82
EPB41L3-214ENST00000578618 FAT1Q14517 4588 aa3.64□□□□□ -1.83
EPB41L3-214ENST00000578618 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
EPB41L3-214ENST00000578618 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
EPB41L3-214ENST00000578618 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
EPB41L3-214ENST00000578618 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
EPB41L3-214ENST00000578618 RYR2Q92736 4967 aa3.57□□□□□ -1.84
EPB41L3-214ENST00000578618 LRP1BQ9NZR2 4599 aa3.55□□□□□ -1.84
EPB41L3-214ENST00000578618 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
EPB41L3-214ENST00000578618 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
EPB41L3-214ENST00000578618 RYR1P21817 5038 aa3.52□□□□□ -1.85
EPB41L3-214ENST00000578618 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
EPB41L3-214ENST00000578618 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
EPB41L3-214ENST00000578618 MYCBP2O75592 4640 aa3.5□□□□□ -1.85
EPB41L3-214ENST00000578618 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
EPB41L3-214ENST00000578618 RYR3Q15413 4870 aa3.47□□□□□ -1.85
EPB41L3-214ENST00000578618 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
EPB41L3-214ENST00000578618 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
EPB41L3-214ENST00000578618 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
EPB41L3-214ENST00000578618 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
EPB41L3-214ENST00000578618 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
EPB41L3-214ENST00000578618 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
EPB41L3-214ENST00000578618 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
EPB41L3-214ENST00000578618 HSPG2P98160 4391 aa3.38□□□□□ -1.87
EPB41L3-214ENST00000578618 KRTAP17-1Q9BYP8 105 aa3.35□□□□□ -1.87
EPB41L3-214ENST00000578618 TNXBP22105 4242 aa3.31□□□□□ -1.88
EPB41L3-214ENST00000578618 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
EPB41L3-214ENST00000578618 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
EPB41L3-214ENST00000578618 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
EPB41L3-214ENST00000578618 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
EPB41L3-214ENST00000578618 MT2AP02795 61 aa3.25□□□□□ -1.89
EPB41L3-214ENST00000578618 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
EPB41L3-214ENST00000578618 MT1FP04733 61 aa3.22□□□□□ -1.89
EPB41L3-214ENST00000578618 KRTAP19-1Q8IUB9 90 aa3.22□□□□□ -1.89
EPB41L3-214ENST00000578618 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
EPB41L3-214ENST00000578618 HERC2O95714 4834 aa3.2□□□□□ -1.9
EPB41L3-214ENST00000578618 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
EPB41L3-214ENST00000578618 LRP2P98164 4655 aa3.19□□□□□ -1.9
EPB41L3-214ENST00000578618 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
EPB41L3-214ENST00000578618 MT1HP80294 61 aa3.17□□□□□ -1.9
EPB41L3-214ENST00000578618 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
EPB41L3-214ENST00000578618 MT1XP80297 61 aa3.16□□□□□ -1.9
EPB41L3-214ENST00000578618 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
EPB41L3-214ENST00000578618 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
EPB41L3-214ENST00000578618 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
EPB41L3-214ENST00000578618 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
EPB41L3-214ENST00000578618 MT1GP13640 62 aa3.11□□□□□ -1.91
EPB41L3-214ENST00000578618 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
EPB41L3-214ENST00000578618 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
EPB41L3-214ENST00000578618 PRM1P04553 51 aa3.09□□□□□ -1.91
EPB41L3-214ENST00000578618 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
EPB41L3-214ENST00000578618 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
EPB41L3-214ENST00000578618 KRTAP4-8Q9BYQ9 185 aa3.03□□□□□ -1.92
EPB41L3-214ENST00000578618 HERC1Q15751 4861 aa3.03□□□□□ -1.92
EPB41L3-214ENST00000578618 MT1BP07438 61 aa3.03□□□□□ -1.92
EPB41L3-214ENST00000578618 LPAP08519 4548 aa2.99□□□□□ -1.93
EPB41L3-214ENST00000578618 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
EPB41L3-214ENST00000578618 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
EPB41L3-214ENST00000578618 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
EPB41L3-214ENST00000578618 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
EPB41L3-214ENST00000578618 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
EPB41L3-214ENST00000578618 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
EPB41L3-214ENST00000578618 LCE2CQ5TA81 110 aa2.94□□□□□ -1.94
EPB41L3-214ENST00000578618 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
EPB41L3-214ENST00000578618 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
EPB41L3-214ENST00000578618 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
EPB41L3-214ENST00000578618 MT1LQ93083 61 aa2.88□□□□□ -1.95
EPB41L3-214ENST00000578618 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
EPB41L3-214ENST00000578618 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms