RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 THOC2Q8NI27 1593 aaKnown RBP-0.96□□□□□ -2.56
TOP2A-202ENST00000577541 PRUNE2Q8WUY3 3088 aa-0.96□□□□□ -2.56
TOP2A-202ENST00000577541 H3BVH4 76 aa-0.97□□□□□ -2.56
TOP2A-202ENST00000577541 RPS29P62273 56 aaKnown RBP-0.97□□□□□ -2.56
TOP2A-202ENST00000577541 MGAQ8IWI9 3026 aa-0.97□□□□□ -2.57
TOP2A-202ENST00000577541 FREM2Q5SZK8 3169 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 IGLV5-48A0A075B6I7 105 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 ETDCA0A1B0GVM5 59 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 SFTA3P0C7M3 94 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 MINOS1Q5TGZ0 78 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 CENPEQ02224 2701 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 CSMD2Q7Z408 3487 aa-0.98□□□□□ -2.57
TOP2A-202ENST00000577541 IQGAP3Q86VI3 1631 aa-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 MRPL33O75394 65 aaKnown RBP-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 TNP1P09430 55 aa-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 HILPDAQ9Y5L2 63 aa-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 LRRIQ1Q96JM4 1722 aa-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 RRBP1Q9P2E9 1410 aaKnown RBP-0.99□□□□□ -2.57
TOP2A-202ENST00000577541 LY75O60449 1722 aa-1□□□□□ -2.57
TOP2A-202ENST00000577541 MYO5CQ9NQX4 1742 aa-1.01□□□□□ -2.57
TOP2A-202ENST00000577541 ABCC6O95255 1503 aa-1.01□□□□□ -2.57
TOP2A-202ENST00000577541 TRRAPQ9Y4A5 3859 aa-1.01□□□□□ -2.57
TOP2A-202ENST00000577541 MMP24-AS1A0A0U1RRL7 71 aa-1.02□□□□□ -2.57
TOP2A-202ENST00000577541 A8MTW9 85 aa-1.02□□□□□ -2.57
TOP2A-202ENST00000577541 FCER1GP30273 86 aa-1.02□□□□□ -2.57
TOP2A-202ENST00000577541 C6orf48Q9UBA6 75 aa-1.02□□□□□ -2.57
TOP2A-202ENST00000577541 CDC42BPAQ5VT25 1732 aa-1.03□□□□□ -2.57
TOP2A-202ENST00000577541 C3P01024 1663 aa-1.03□□□□□ -2.57
TOP2A-202ENST00000577541 ANKARQ7Z5J8 1434 aa-1.03□□□□□ -2.57
TOP2A-202ENST00000577541 LINC01546A6NGU7 62 aa-1.03□□□□□ -2.57
TOP2A-202ENST00000577541 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.03□□□□□ -2.57
TOP2A-202ENST00000577541 ABCA9Q8IUA7 1624 aa-1.04□□□□□ -2.58
TOP2A-202ENST00000577541 MAST1Q9Y2H9 1570 aa-1.04□□□□□ -2.58
TOP2A-202ENST00000577541 CEP350Q5VT06 3117 aa-1.04□□□□□ -2.58
TOP2A-202ENST00000577541 SPART-AS1P0CW21 52 aa-1.05□□□□□ -2.58
TOP2A-202ENST00000577541 SPEGQ15772 3267 aa-1.05□□□□□ -2.58
TOP2A-202ENST00000577541 UNC80Q8N2C7 3258 aa-1.06□□□□□ -2.58
TOP2A-202ENST00000577541 DEFB136Q30KP8 78 aa-1.07□□□□□ -2.58
TOP2A-202ENST00000577541 DEFB114Q30KQ6 69 aa-1.07□□□□□ -2.58
TOP2A-202ENST00000577541 UGGT2Q9NYU1 1516 aa-1.07□□□□□ -2.58
TOP2A-202ENST00000577541 DCHS1Q96JQ0 3298 aa-1.07□□□□□ -2.58
TOP2A-202ENST00000577541 DNMBPQ6XZF7 1577 aa-1.08□□□□□ -2.58
TOP2A-202ENST00000577541 CLASP1Q7Z460 1538 aa-1.08□□□□□ -2.58
TOP2A-202ENST00000577541 DMDP11532 3685 aa-1.08□□□□□ -2.58
TOP2A-202ENST00000577541 ATXN8Q156A1 80 aa-1.08□□□□□ -2.58
TOP2A-202ENST00000577541 MROH1Q8NDA8 1641 aa-1.08□□□□□ -2.58
TOP2A-202ENST00000577541 CFAP54Q96N23 3096 aa-1.1□□□□□ -2.59
TOP2A-202ENST00000577541 TTTY10Q9BZA0 68 aa-1.1□□□□□ -2.59
TOP2A-202ENST00000577541 WDFY4Q6ZS81 3184 aa-1.11□□□□□ -2.59
TOP2A-202ENST00000577541 H3BUA1 57 aa-1.11□□□□□ -2.59
TOP2A-202ENST00000577541 M0QZ58 72 aa-1.11□□□□□ -2.59
TOP2A-202ENST00000577541 CRYBG3Q68DQ2 2970 aa-1.11□□□□□ -2.59
TOP2A-202ENST00000577541 CROCC2H7BZ55 1655 aa-1.12□□□□□ -2.59
TOP2A-202ENST00000577541 TIAM1Q13009 1591 aa-1.13□□□□□ -2.59
TOP2A-202ENST00000577541 DUOX2Q9NRD8 1548 aa-1.13□□□□□ -2.59
TOP2A-202ENST00000577541 MADDQ8WXG6 1647 aa-1.13□□□□□ -2.59
TOP2A-202ENST00000577541 NOP10Q9NPE3 64 aaKnown RBP-1.13□□□□□ -2.59
TOP2A-202ENST00000577541 EP400Q96L91 3159 aa-1.13□□□□□ -2.59
TOP2A-202ENST00000577541 CEP250Q9BV73 2442 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 WDFY3Q8IZQ1 3526 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 LOC400499M0QZD8 3231 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 LINC01549A6NIU2 74 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 LEAP2Q969E1 77 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 GNG13Q9P2W3 67 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 GLI2P10070 1586 aa-1.14□□□□□ -2.59
TOP2A-202ENST00000577541 A0A1B0GUL6 1792 aa-1.15□□□□□ -2.59
TOP2A-202ENST00000577541 K7EMI3 77 aa-1.15□□□□□ -2.59
TOP2A-202ENST00000577541 M0QY20 66 aa-1.15□□□□□ -2.59
TOP2A-202ENST00000577541 FRYLO94915 3013 aa-1.15□□□□□ -2.59
TOP2A-202ENST00000577541 MUC3AQ02505 3323 aa-1.17□□□□□ -2.6
TOP2A-202ENST00000577541 M0R1W7 72 aa-1.17□□□□□ -2.6
TOP2A-202ENST00000577541 KAAG1Q9UBP8 84 aa-1.17□□□□□ -2.6
TOP2A-202ENST00000577541 PCNTO95613 3336 aa-1.18□□□□□ -2.6
TOP2A-202ENST00000577541 SMCO4Q9NRQ5 59 aa-1.19□□□□□ -2.6
TOP2A-202ENST00000577541 ABCA6Q8N139 1617 aa-1.19□□□□□ -2.6
TOP2A-202ENST00000577541 EEA1Q15075 1411 aa-1.21□□□□□ -2.6
TOP2A-202ENST00000577541 FAM208AQ9UK61 1670 aaKnown RBP-1.21□□□□□ -2.6
TOP2A-202ENST00000577541 DNAH14Q0VDD8 3507 aa-1.21□□□□□ -2.6
TOP2A-202ENST00000577541 LINC00308Q8TCZ7 52 aa-1.22□□□□□ -2.6
TOP2A-202ENST00000577541 CFAP47Q6ZTR5 3102 aa-1.22□□□□□ -2.61
TOP2A-202ENST00000577541 SZT2Q5T011 3432 aa-1.23□□□□□ -2.61
TOP2A-202ENST00000577541 IGIPA6NJ69 53 aa-1.23□□□□□ -2.61
TOP2A-202ENST00000577541 PDCD5O14737 125 aa-1.23□□□□□ -2.61
TOP2A-202ENST00000577541 VPS13CQ709C8 3753 aa-1.23□□□□□ -2.61
TOP2A-202ENST00000577541 ALS2Q96Q42 1657 aa-1.23□□□□□ -2.61
TOP2A-202ENST00000577541 USP34Q70CQ2 3546 aa-1.24□□□□□ -2.61
TOP2A-202ENST00000577541 EFCAB6Q5THR3 1501 aa-1.25□□□□□ -2.61
TOP2A-202ENST00000577541 MKI67P46013 3256 aaKnown RBP-1.25□□□□□ -2.61
TOP2A-202ENST00000577541 WFDC10BQ8IUB3 73 aa-1.25□□□□□ -2.61
TOP2A-202ENST00000577541 VCANP13611 3396 aa-1.26□□□□□ -2.61
TOP2A-202ENST00000577541 EFCAB5A4FU69 1503 aa-1.26□□□□□ -2.61
TOP2A-202ENST00000577541 ABRACLQ9P1F3 81 aa-1.27□□□□□ -2.61
TOP2A-202ENST00000577541 KIF21BO75037 1637 aa-1.27□□□□□ -2.61
TOP2A-202ENST00000577541 PREX2Q70Z35 1606 aa-1.28□□□□□ -2.61
TOP2A-202ENST00000577541 UGGT1Q9NYU2 1555 aa-1.28□□□□□ -2.61
TOP2A-202ENST00000577541 SMIM27A0A1W2PRY6 76 aa-1.29□□□□□ -2.62
TOP2A-202ENST00000577541 TMEM167BQ9NRX6 74 aa-1.29□□□□□ -2.62
TOP2A-202ENST00000577541 CCDC180Q9P1Z9 1646 aa-1.29□□□□□ -2.62
TOP2A-202ENST00000577541 SCRIBQ14160 1630 aa-1.3□□□□□ -2.62
TOP2A-202ENST00000577541 CD52P31358 61 aa-1.32□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms