RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LRP1BQ9NZR2 4599 aa2.98□□□□□ -1.93
VAPA-203ENST00000577539 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
VAPA-203ENST00000577539 DMBT1Q9UGM3 2413 aaPredicted RBP2.94□□□□□ -1.94
VAPA-203ENST00000577539 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
VAPA-203ENST00000577539 A6NN06 94 aa2.93□□□□□ -1.94
VAPA-203ENST00000577539 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
VAPA-203ENST00000577539 UQCR11O14957 56 aa2.92□□□□□ -1.94
VAPA-203ENST00000577539 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
VAPA-203ENST00000577539 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
VAPA-203ENST00000577539 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
VAPA-203ENST00000577539 FLG2Q5D862 2391 aaPredicted RBP2.91□□□□□ -1.94
VAPA-203ENST00000577539 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
VAPA-203ENST00000577539 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
VAPA-203ENST00000577539 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
VAPA-203ENST00000577539 FAT1Q14517 4588 aa2.88□□□□□ -1.95
VAPA-203ENST00000577539 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
VAPA-203ENST00000577539 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
VAPA-203ENST00000577539 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
VAPA-203ENST00000577539 A8MUU9 505 aa2.87□□□□□ -1.95
VAPA-203ENST00000577539 A0A1B0GVY2 172 aa2.86□□□□□ -1.95
VAPA-203ENST00000577539 KRTAP21-3Q3LHN1 58 aa2.86□□□□□ -1.95
VAPA-203ENST00000577539 C20orf166-AS1Q96NR2 134 aa2.86□□□□□ -1.95
VAPA-203ENST00000577539 PKD1P98161 4303 aa2.86□□□□□ -1.95
VAPA-203ENST00000577539 KRTAP4-5Q9BYR2 181 aa2.86□□□□□ -1.95
VAPA-203ENST00000577539 DYNC1H1Q14204 4646 aaKnown RBP2.86□□□□□ -1.95
VAPA-203ENST00000577539 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
VAPA-203ENST00000577539 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
VAPA-203ENST00000577539 A0A1B0GU33 70 aa2.83□□□□□ -1.96
VAPA-203ENST00000577539 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
VAPA-203ENST00000577539 Q5VSD8 79 aa2.82□□□□□ -1.96
VAPA-203ENST00000577539 K7ERS5 55 aa2.82□□□□□ -1.96
VAPA-203ENST00000577539 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
VAPA-203ENST00000577539 KRTAP9-8Q9BYQ0 159 aa2.81□□□□□ -1.96
VAPA-203ENST00000577539 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
VAPA-203ENST00000577539 H0YAA0 97 aa2.79□□□□□ -1.96
VAPA-203ENST00000577539 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
VAPA-203ENST00000577539 ROMO1P60602 79 aa2.79□□□□□ -1.96
VAPA-203ENST00000577539 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
VAPA-203ENST00000577539 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
VAPA-203ENST00000577539 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
VAPA-203ENST00000577539 A0A0D9SG42 100 aa2.76□□□□□ -1.97
VAPA-203ENST00000577539 RPL37P61927 97 aaKnown RBP2.76□□□□□ -1.97
VAPA-203ENST00000577539 LRP1Q07954 4544 aaKnown RBP2.75□□□□□ -1.97
VAPA-203ENST00000577539 P0C880 135 aa2.74□□□□□ -1.97
VAPA-203ENST00000577539 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
VAPA-203ENST00000577539 S4R3F8 94 aa2.74□□□□□ -1.97
VAPA-203ENST00000577539 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
VAPA-203ENST00000577539 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
VAPA-203ENST00000577539 RYR2Q92736 4967 aa2.72□□□□□ -1.97
VAPA-203ENST00000577539 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
VAPA-203ENST00000577539 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
VAPA-203ENST00000577539 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
VAPA-203ENST00000577539 MT1HL1P0DM35 61 aa2.69□□□□□ -1.98
VAPA-203ENST00000577539 KRTAP10-6P60371 365 aaPredicted RBP2.69□□□□□ -1.98
VAPA-203ENST00000577539 KIAA1109Q2LD37 5005 aa2.68□□□□□ -1.98
VAPA-203ENST00000577539 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
VAPA-203ENST00000577539 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
VAPA-203ENST00000577539 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
VAPA-203ENST00000577539 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
VAPA-203ENST00000577539 HSPG2P98160 4391 aa2.66□□□□□ -1.98
VAPA-203ENST00000577539 RYR3Q15413 4870 aa2.65□□□□□ -1.98
VAPA-203ENST00000577539 RYR1P21817 5038 aa2.64□□□□□ -1.99
VAPA-203ENST00000577539 TNXBP22105 4242 aa2.63□□□□□ -1.99
VAPA-203ENST00000577539 TPRXLQ17RH7 258 aa2.63□□□□□ -1.99
VAPA-203ENST00000577539 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
VAPA-203ENST00000577539 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
VAPA-203ENST00000577539 LRP2P98164 4655 aa2.6□□□□□ -1.99
VAPA-203ENST00000577539 M0QZ58 72 aa2.59□□□□□ -1.99
VAPA-203ENST00000577539 R4GN34 69 aa2.58□□□□□ -2
VAPA-203ENST00000577539 KRTAP12-1P59990 96 aa2.57□□□□□ -2
VAPA-203ENST00000577539 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
VAPA-203ENST00000577539 MT3P25713 68 aa2.55□□□□□ -2
VAPA-203ENST00000577539 KRTAP10-12P60413 245 aa2.55□□□□□ -2
VAPA-203ENST00000577539 LPAP08519 4548 aa2.55□□□□□ -2
VAPA-203ENST00000577539 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
VAPA-203ENST00000577539 KRTAP4-1Q9BYQ7 146 aa2.51□□□□□ -2.01
VAPA-203ENST00000577539 ABCA13Q86UQ4 5058 aa2.5□□□□□ -2.01
VAPA-203ENST00000577539 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
VAPA-203ENST00000577539 HERC2O95714 4834 aa2.45□□□□□ -2.02
VAPA-203ENST00000577539 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
VAPA-203ENST00000577539 M0R2T5 61 aa2.39□□□□□ -2.03
VAPA-203ENST00000577539 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
VAPA-203ENST00000577539 KRTAP19-2Q3LHN2 52 aa2.39□□□□□ -2.03
VAPA-203ENST00000577539 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
VAPA-203ENST00000577539 MUC2Q02817 5179 aa2.38□□□□□ -2.03
VAPA-203ENST00000577539 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
VAPA-203ENST00000577539 TNP1P09430 55 aa2.34□□□□□ -2.04
VAPA-203ENST00000577539 BIRC6Q9NR09 4857 aa2.33□□□□□ -2.04
VAPA-203ENST00000577539 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
VAPA-203ENST00000577539 HERC1Q15751 4861 aa2.32□□□□□ -2.04
VAPA-203ENST00000577539 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
VAPA-203ENST00000577539 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
VAPA-203ENST00000577539 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
VAPA-203ENST00000577539 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
VAPA-203ENST00000577539 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
VAPA-203ENST00000577539 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
VAPA-203ENST00000577539 MT1HP80294 61 aa2.25□□□□□ -2.05
VAPA-203ENST00000577539 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
VAPA-203ENST00000577539 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
VAPA-203ENST00000577539 MT1FP04733 61 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms