RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
CDH8-203ENST00000577390 ANK2Q01484 3957 aa4.02□□□□□ -1.77
CDH8-203ENST00000577390 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
CDH8-203ENST00000577390 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
CDH8-203ENST00000577390 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
CDH8-203ENST00000577390 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
CDH8-203ENST00000577390 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
CDH8-203ENST00000577390 ANK3Q12955 4377 aaKnown RBP3.82□□□□□ -1.8
CDH8-203ENST00000577390 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
CDH8-203ENST00000577390 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
CDH8-203ENST00000577390 KRTAP4-5Q9BYR2 181 aa3.73□□□□□ -1.81
CDH8-203ENST00000577390 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
CDH8-203ENST00000577390 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
CDH8-203ENST00000577390 KMT2AQ03164 3969 aa3.71□□□□□ -1.82
CDH8-203ENST00000577390 DNAH6Q9C0G6 4158 aa3.67□□□□□ -1.82
CDH8-203ENST00000577390 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
CDH8-203ENST00000577390 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
CDH8-203ENST00000577390 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
CDH8-203ENST00000577390 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
CDH8-203ENST00000577390 SPRR2EP22531 72 aa3.58□□□□□ -1.84
CDH8-203ENST00000577390 SPRR2BP35325 72 aa3.58□□□□□ -1.84
CDH8-203ENST00000577390 SPRR2AP35326 72 aa3.58□□□□□ -1.84
CDH8-203ENST00000577390 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
CDH8-203ENST00000577390 DNAH10Q8IVF4 4471 aa3.49□□□□□ -1.85
CDH8-203ENST00000577390 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CDH8-203ENST00000577390 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
CDH8-203ENST00000577390 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
CDH8-203ENST00000577390 MT1HL1P0DM35 61 aa3.44□□□□□ -1.86
CDH8-203ENST00000577390 PRKDCP78527 4128 aaKnown RBP3.43□□□□□ -1.86
CDH8-203ENST00000577390 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
CDH8-203ENST00000577390 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
CDH8-203ENST00000577390 LCE2BO14633 110 aa3.39□□□□□ -1.87
CDH8-203ENST00000577390 DNAH9Q9NYC9 4486 aa3.38□□□□□ -1.87
CDH8-203ENST00000577390 DYNC2H1Q8NCM8 4307 aaKnown RBP3.35□□□□□ -1.87
CDH8-203ENST00000577390 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
CDH8-203ENST00000577390 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
CDH8-203ENST00000577390 DNAH17Q9UFH2 4485 aa3.31□□□□□ -1.88
CDH8-203ENST00000577390 LCE2CQ5TA81 110 aa3.3□□□□□ -1.88
CDH8-203ENST00000577390 FAT2Q9NYQ8 4349 aa3.3□□□□□ -1.88
CDH8-203ENST00000577390 STARD9Q9P2P6 4700 aa3.28□□□□□ -1.88
CDH8-203ENST00000577390 DNAH11Q96DT5 4516 aa3.27□□□□□ -1.89
CDH8-203ENST00000577390 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CDH8-203ENST00000577390 VPS13DQ5THJ4 4388 aa3.24□□□□□ -1.89
CDH8-203ENST00000577390 MT1HP80294 61 aa3.24□□□□□ -1.89
CDH8-203ENST00000577390 LCE2DQ5TA82 110 aaPredicted RBP3.23□□□□□ -1.89
CDH8-203ENST00000577390 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
CDH8-203ENST00000577390 DNAH8Q96JB1 4490 aa3.22□□□□□ -1.89
CDH8-203ENST00000577390 PLECQ15149 4684 aaKnown RBP3.2□□□□□ -1.9
CDH8-203ENST00000577390 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
CDH8-203ENST00000577390 MT4P47944 62 aa3.18□□□□□ -1.9
CDH8-203ENST00000577390 MT1GP13640 62 aa3.17□□□□□ -1.9
CDH8-203ENST00000577390 PKD1P98161 4303 aa3.15□□□□□ -1.9
CDH8-203ENST00000577390 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
CDH8-203ENST00000577390 HSPG2P98160 4391 aa3.13□□□□□ -1.91
CDH8-203ENST00000577390 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CDH8-203ENST00000577390 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
CDH8-203ENST00000577390 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
CDH8-203ENST00000577390 MT2AP02795 61 aa3.1□□□□□ -1.91
CDH8-203ENST00000577390 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
CDH8-203ENST00000577390 MT1FP04733 61 aa3.02□□□□□ -1.93
CDH8-203ENST00000577390 DNAH5Q8TE73 4624 aa3.01□□□□□ -1.93
CDH8-203ENST00000577390 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
CDH8-203ENST00000577390 MT3P25713 68 aa2.99□□□□□ -1.93
CDH8-203ENST00000577390 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
CDH8-203ENST00000577390 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
CDH8-203ENST00000577390 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
CDH8-203ENST00000577390 LPAP08519 4548 aa2.97□□□□□ -1.93
CDH8-203ENST00000577390 RYR1P21817 5038 aa2.97□□□□□ -1.93
CDH8-203ENST00000577390 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
CDH8-203ENST00000577390 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
CDH8-203ENST00000577390 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
CDH8-203ENST00000577390 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
CDH8-203ENST00000577390 TNXBP22105 4242 aa2.95□□□□□ -1.94
CDH8-203ENST00000577390 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CDH8-203ENST00000577390 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
CDH8-203ENST00000577390 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
CDH8-203ENST00000577390 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
CDH8-203ENST00000577390 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
CDH8-203ENST00000577390 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
CDH8-203ENST00000577390 MT1XP80297 61 aa2.9□□□□□ -1.95
CDH8-203ENST00000577390 KRTAP19-1Q8IUB9 90 aa2.9□□□□□ -1.95
CDH8-203ENST00000577390 APOBP04114 4563 aaKnown RBP2.87□□□□□ -1.95
CDH8-203ENST00000577390 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
CDH8-203ENST00000577390 PRM1P04553 51 aa2.84□□□□□ -1.95
CDH8-203ENST00000577390 FAT1Q14517 4588 aa2.83□□□□□ -1.96
CDH8-203ENST00000577390 MYCBP2O75592 4640 aa2.82□□□□□ -1.96
CDH8-203ENST00000577390 SACSQ9NZJ4 4579 aa2.82□□□□□ -1.96
CDH8-203ENST00000577390 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
CDH8-203ENST00000577390 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
CDH8-203ENST00000577390 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
CDH8-203ENST00000577390 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
CDH8-203ENST00000577390 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
CDH8-203ENST00000577390 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
CDH8-203ENST00000577390 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
CDH8-203ENST00000577390 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
CDH8-203ENST00000577390 MUC17Q685J3 4493 aa2.72□□□□□ -1.97
CDH8-203ENST00000577390 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
CDH8-203ENST00000577390 MT1BP07438 61 aa2.67□□□□□ -1.98
CDH8-203ENST00000577390 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
CDH8-203ENST00000577390 DNHD1Q96M86 4753 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms