RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ADM2Q7Z4H4 148 aa3.21□□□□□ -1.9
NUP88-212ENST00000576708 RBM3P98179 157 aaKnown RBP3.2□□□□□ -1.9
NUP88-212ENST00000576708 Q96NJ1 140 aa3.2□□□□□ -1.9
NUP88-212ENST00000576708 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
NUP88-212ENST00000576708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.19□□□□□ -1.9
NUP88-212ENST00000576708 COX8AP10176 69 aa3.18□□□□□ -1.9
NUP88-212ENST00000576708 USH2AO75445 5202 aa3.18□□□□□ -1.9
NUP88-212ENST00000576708 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
NUP88-212ENST00000576708 H7BZZ5 65 aa3.17□□□□□ -1.9
NUP88-212ENST00000576708 A8MUU9 505 aa3.16□□□□□ -1.9
NUP88-212ENST00000576708 A8MWP4 228 aa3.16□□□□□ -1.9
NUP88-212ENST00000576708 C20orf166-AS1Q96NR2 134 aa3.16□□□□□ -1.9
NUP88-212ENST00000576708 A0A087WSZ3 146 aa3.15□□□□□ -1.91
NUP88-212ENST00000576708 NDUFC1O43677 76 aa3.15□□□□□ -1.91
NUP88-212ENST00000576708 ACYP1P07311 99 aa3.15□□□□□ -1.91
NUP88-212ENST00000576708 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
NUP88-212ENST00000576708 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
NUP88-212ENST00000576708 KLKP1Q107X0 134 aa3.14□□□□□ -1.91
NUP88-212ENST00000576708 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
NUP88-212ENST00000576708 BPY2O14599 106 aa3.13□□□□□ -1.91
NUP88-212ENST00000576708 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
NUP88-212ENST00000576708 A0A0B4J2C4 111 aa3.12□□□□□ -1.91
NUP88-212ENST00000576708 H0YGX0 51 aa3.12□□□□□ -1.91
NUP88-212ENST00000576708 K7ERS5 55 aa3.12□□□□□ -1.91
NUP88-212ENST00000576708 MT2AP02795 61 aa3.12□□□□□ -1.91
NUP88-212ENST00000576708 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
NUP88-212ENST00000576708 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
NUP88-212ENST00000576708 ROMO1P60602 79 aa3.11□□□□□ -1.91
NUP88-212ENST00000576708 A6NED7 52 aa3.1□□□□□ -1.91
NUP88-212ENST00000576708 MT1FP04733 61 aa3.1□□□□□ -1.91
NUP88-212ENST00000576708 IGKV4-1P06312 121 aa3.1□□□□□ -1.91
NUP88-212ENST00000576708 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
NUP88-212ENST00000576708 PRO1854Q9UHT4 67 aa3.1□□□□□ -1.91
NUP88-212ENST00000576708 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
NUP88-212ENST00000576708 HRES1P13985 223 aa3.09□□□□□ -1.91
NUP88-212ENST00000576708 FXYD2P54710 66 aa3.09□□□□□ -1.91
NUP88-212ENST00000576708 CYP4F30PQ9H0H9 118 aa3.08□□□□□ -1.92
NUP88-212ENST00000576708 CDC42SE1Q9NRR8 79 aa3.08□□□□□ -1.92
NUP88-212ENST00000576708 HCG22E2RYF7 251 aa3.07□□□□□ -1.92
NUP88-212ENST00000576708 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
NUP88-212ENST00000576708 TRBV7-4A0A0J9YYF1 115 aa3.06□□□□□ -1.92
NUP88-212ENST00000576708 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
NUP88-212ENST00000576708 Q5VV11 94 aa3.06□□□□□ -1.92
NUP88-212ENST00000576708 ORMDL1Q9P0S3 153 aa3.06□□□□□ -1.92
NUP88-212ENST00000576708 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
NUP88-212ENST00000576708 DNAL4O96015 105 aa3.05□□□□□ -1.92
NUP88-212ENST00000576708 Q6ZQT0 140 aa3.05□□□□□ -1.92
NUP88-212ENST00000576708 SPTSSBQ8NFR3 76 aa3.05□□□□□ -1.92
NUP88-212ENST00000576708 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
NUP88-212ENST00000576708 A8MU10 97 aa3.04□□□□□ -1.92
NUP88-212ENST00000576708 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
NUP88-212ENST00000576708 C20orf197Q8N268 126 aa3.04□□□□□ -1.92
NUP88-212ENST00000576708 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
NUP88-212ENST00000576708 TRAV7A0A075B6U4 112 aa3.03□□□□□ -1.92
NUP88-212ENST00000576708 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
NUP88-212ENST00000576708 P0C880 135 aa3.01□□□□□ -1.93
NUP88-212ENST00000576708 SPINK7P58062 85 aa3.01□□□□□ -1.93
NUP88-212ENST00000576708 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
NUP88-212ENST00000576708 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
NUP88-212ENST00000576708 H3BQ85 93 aa3□□□□□ -1.93
NUP88-212ENST00000576708 COX6CP09669 75 aa3□□□□□ -1.93
NUP88-212ENST00000576708 C14orf132Q9NPU4 83 aa3□□□□□ -1.93
NUP88-212ENST00000576708 BAALC-AS2P0C853 105 aa2.98□□□□□ -1.93
NUP88-212ENST00000576708 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
NUP88-212ENST00000576708 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
NUP88-212ENST00000576708 H3BPC8 53 aa2.97□□□□□ -1.93
NUP88-212ENST00000576708 IGKV3D-7A0A0C4DH55 119 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 ATP5EP2Q5VTU8 51 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
NUP88-212ENST00000576708 NDUFB1O75438 58 aa2.95□□□□□ -1.94
NUP88-212ENST00000576708 ATXN8Q156A1 80 aa2.95□□□□□ -1.94
NUP88-212ENST00000576708 LOC110117498A0A087WWA1 95 aa2.92□□□□□ -1.94
NUP88-212ENST00000576708 MMP24-AS1A0A0U1RRL7 71 aa2.91□□□□□ -1.94
NUP88-212ENST00000576708 JMJD7-PLA2G4BH0Y9G9 81 aa2.91□□□□□ -1.94
NUP88-212ENST00000576708 LINC00846Q9NV44 126 aa2.91□□□□□ -1.94
NUP88-212ENST00000576708 NREPQ16612 68 aa2.9□□□□□ -1.95
NUP88-212ENST00000576708 H1FX-AS1Q4G0G2 97 aa2.9□□□□□ -1.95
NUP88-212ENST00000576708 Q5W150 140 aa2.9□□□□□ -1.95
NUP88-212ENST00000576708 CSAG1Q6PB30 78 aa2.9□□□□□ -1.95
NUP88-212ENST00000576708 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
NUP88-212ENST00000576708 MRPL34Q9BQ48 92 aaKnown RBP2.9□□□□□ -1.95
NUP88-212ENST00000576708 A0A1B0GU33 70 aa2.89□□□□□ -1.95
NUP88-212ENST00000576708 K7EQZ3 153 aa2.89□□□□□ -1.95
NUP88-212ENST00000576708 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
NUP88-212ENST00000576708 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
NUP88-212ENST00000576708 A0A087WVE0 104 aa2.88□□□□□ -1.95
NUP88-212ENST00000576708 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
NUP88-212ENST00000576708 SNURFQ9Y675 71 aa2.88□□□□□ -1.95
NUP88-212ENST00000576708 PDE6GP18545 87 aa2.87□□□□□ -1.95
NUP88-212ENST00000576708 NEBP20929 6669 aa2.87□□□□□ -1.95
NUP88-212ENST00000576708 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
NUP88-212ENST00000576708 Q8N9L7 120 aa2.85□□□□□ -1.95
NUP88-212ENST00000576708 PRR15LQ9BU68 103 aa2.85□□□□□ -1.95
NUP88-212ENST00000576708 MT1BP07438 61 aa2.82□□□□□ -1.96
NUP88-212ENST00000576708 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
NUP88-212ENST00000576708 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms