RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LYSTQ99698 3801 aa8.5□□□□□ -1.05
ATPAF1-214ENST00000576409 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
ATPAF1-214ENST00000576409 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
ATPAF1-214ENST00000576409 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
ATPAF1-214ENST00000576409 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
ATPAF1-214ENST00000576409 MYCBP2O75592 4640 aa8.4□□□□□ -1.07
ATPAF1-214ENST00000576409 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
ATPAF1-214ENST00000576409 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
ATPAF1-214ENST00000576409 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
ATPAF1-214ENST00000576409 PRKDCP78527 4128 aaKnown RBP8.33□□□□□ -1.08
ATPAF1-214ENST00000576409 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
ATPAF1-214ENST00000576409 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
ATPAF1-214ENST00000576409 DNAH17Q9UFH2 4485 aa8.23□□□□□ -1.09
ATPAF1-214ENST00000576409 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
ATPAF1-214ENST00000576409 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
ATPAF1-214ENST00000576409 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
ATPAF1-214ENST00000576409 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
ATPAF1-214ENST00000576409 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.1
ATPAF1-214ENST00000576409 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
ATPAF1-214ENST00000576409 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
ATPAF1-214ENST00000576409 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
ATPAF1-214ENST00000576409 RYR1P21817 5038 aa8.06□□□□□ -1.12
ATPAF1-214ENST00000576409 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
ATPAF1-214ENST00000576409 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
ATPAF1-214ENST00000576409 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
ATPAF1-214ENST00000576409 APOBP04114 4563 aaKnown RBP7.97□□□□□ -1.13
ATPAF1-214ENST00000576409 SACSQ9NZJ4 4579 aa7.97□□□□□ -1.13
ATPAF1-214ENST00000576409 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.13
ATPAF1-214ENST00000576409 HECTD4Q9Y4D8 3996 aa7.9□□□□□ -1.15
ATPAF1-214ENST00000576409 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
ATPAF1-214ENST00000576409 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-214ENST00000576409 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
ATPAF1-214ENST00000576409 HYDINQ4G0P3 5121 aa7.77□□□□□ -1.16
ATPAF1-214ENST00000576409 KRTAP4-1Q9BYQ7 146 aa7.77□□□□□ -1.17
ATPAF1-214ENST00000576409 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
ATPAF1-214ENST00000576409 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
ATPAF1-214ENST00000576409 LRP2P98164 4655 aa7.68□□□□□ -1.18
ATPAF1-214ENST00000576409 RYR3Q15413 4870 aa7.67□□□□□ -1.18
ATPAF1-214ENST00000576409 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
ATPAF1-214ENST00000576409 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
ATPAF1-214ENST00000576409 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
ATPAF1-214ENST00000576409 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
ATPAF1-214ENST00000576409 KMT2CQ8NEZ4 4911 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-214ENST00000576409 HSPG2P98160 4391 aa7.28□□□□□ -1.24
ATPAF1-214ENST00000576409 PKD1P98161 4303 aa7.27□□□□□ -1.25
ATPAF1-214ENST00000576409 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
ATPAF1-214ENST00000576409 INE1O15225 51 aa7.26□□□□□ -1.25
ATPAF1-214ENST00000576409 LPAP08519 4548 aa7.26□□□□□ -1.25
ATPAF1-214ENST00000576409 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
ATPAF1-214ENST00000576409 RYR2Q92736 4967 aa7.24□□□□□ -1.25
ATPAF1-214ENST00000576409 HERC2O95714 4834 aa7.19□□□□□ -1.26
ATPAF1-214ENST00000576409 MT2AP02795 61 aa7.11□□□□□ -1.27
ATPAF1-214ENST00000576409 MT1HP80294 61 aa7.1□□□□□ -1.27
ATPAF1-214ENST00000576409 MT1FP04733 61 aa7.09□□□□□ -1.27
ATPAF1-214ENST00000576409 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
ATPAF1-214ENST00000576409 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-214ENST00000576409 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
ATPAF1-214ENST00000576409 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
ATPAF1-214ENST00000576409 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
ATPAF1-214ENST00000576409 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
ATPAF1-214ENST00000576409 MUC2Q02817 5179 aa6.86□□□□□ -1.31
ATPAF1-214ENST00000576409 TNXBP22105 4242 aa6.84□□□□□ -1.31
ATPAF1-214ENST00000576409 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
ATPAF1-214ENST00000576409 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-214ENST00000576409 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
ATPAF1-214ENST00000576409 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
ATPAF1-214ENST00000576409 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
ATPAF1-214ENST00000576409 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
ATPAF1-214ENST00000576409 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
ATPAF1-214ENST00000576409 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
ATPAF1-214ENST00000576409 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
ATPAF1-214ENST00000576409 MT1XP80297 61 aa6.66□□□□□ -1.34
ATPAF1-214ENST00000576409 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
ATPAF1-214ENST00000576409 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
ATPAF1-214ENST00000576409 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
ATPAF1-214ENST00000576409 KRTAP19-2Q3LHN2 52 aa6.63□□□□□ -1.35
ATPAF1-214ENST00000576409 MT1BP07438 61 aa6.61□□□□□ -1.35
ATPAF1-214ENST00000576409 HERC1Q15751 4861 aa6.6□□□□□ -1.35
ATPAF1-214ENST00000576409 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
ATPAF1-214ENST00000576409 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-214ENST00000576409 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
ATPAF1-214ENST00000576409 OBSCNQ5VST9 7968 aa6.58□□□□□ -1.36
ATPAF1-214ENST00000576409 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
ATPAF1-214ENST00000576409 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
ATPAF1-214ENST00000576409 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
ATPAF1-214ENST00000576409 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-214ENST00000576409 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
ATPAF1-214ENST00000576409 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
ATPAF1-214ENST00000576409 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
ATPAF1-214ENST00000576409 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
ATPAF1-214ENST00000576409 MT1GP13640 62 aa6.18□□□□□ -1.42
ATPAF1-214ENST00000576409 LCE2BO14633 110 aa6.17□□□□□ -1.42
ATPAF1-214ENST00000576409 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
ATPAF1-214ENST00000576409 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
ATPAF1-214ENST00000576409 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-214ENST00000576409 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-214ENST00000576409 USH2AO75445 5202 aa6.01□□□□□ -1.45
ATPAF1-214ENST00000576409 KMT2DO14686 5537 aa5.96□□□□□ -1.45
ATPAF1-214ENST00000576409 MT1LQ93083 61 aa5.91□□□□□ -1.46
ATPAF1-214ENST00000576409 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms