RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
CTDNEP1-211ENST00000575783 A8MUN3 132 aa6.63□□□□□ -1.35
CTDNEP1-211ENST00000575783 A0A087WVE0 104 aa6.62□□□□□ -1.35
CTDNEP1-211ENST00000575783 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-211ENST00000575783 H0YAA0 97 aa6.52□□□□□ -1.37
CTDNEP1-211ENST00000575783 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
CTDNEP1-211ENST00000575783 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-211ENST00000575783 NDUFC1O43677 76 aa6.47□□□□□ -1.37
CTDNEP1-211ENST00000575783 UQCR10Q9UDW1 63 aa6.46□□□□□ -1.38
CTDNEP1-211ENST00000575783 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
CTDNEP1-211ENST00000575783 CYP4F30PQ9H0H9 118 aa6.41□□□□□ -1.38
CTDNEP1-211ENST00000575783 R4GN34 69 aa6.4□□□□□ -1.38
CTDNEP1-211ENST00000575783 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
CTDNEP1-211ENST00000575783 PYY3Q5JQD4 70 aa6.39□□□□□ -1.39
CTDNEP1-211ENST00000575783 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
CTDNEP1-211ENST00000575783 TMA7Q9Y2S6 64 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-211ENST00000575783 K7EP34 96 aa6.37□□□□□ -1.39
CTDNEP1-211ENST00000575783 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
CTDNEP1-211ENST00000575783 TSTD3H0UI37 97 aa6.35□□□□□ -1.39
CTDNEP1-211ENST00000575783 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
CTDNEP1-211ENST00000575783 M0QZ58 72 aa6.33□□□□□ -1.4
CTDNEP1-211ENST00000575783 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
CTDNEP1-211ENST00000575783 H3BT86 120 aa6.28□□□□□ -1.4
CTDNEP1-211ENST00000575783 P0C880 135 aa6.27□□□□□ -1.41
CTDNEP1-211ENST00000575783 M0R143 59 aa6.25□□□□□ -1.41
CTDNEP1-211ENST00000575783 MT4P47944 62 aa6.25□□□□□ -1.41
CTDNEP1-211ENST00000575783 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
CTDNEP1-211ENST00000575783 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
CTDNEP1-211ENST00000575783 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
CTDNEP1-211ENST00000575783 ACYP1P07311 99 aa6.23□□□□□ -1.41
CTDNEP1-211ENST00000575783 TRAV22A0A0B4J277 110 aa6.21□□□□□ -1.42
CTDNEP1-211ENST00000575783 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
CTDNEP1-211ENST00000575783 C20orf197Q8N268 126 aa6.21□□□□□ -1.42
CTDNEP1-211ENST00000575783 LOC105371267A0A1B0GV96 52 aa6.19□□□□□ -1.42
CTDNEP1-211ENST00000575783 SMIM6P0DI80 62 aa6.17□□□□□ -1.42
CTDNEP1-211ENST00000575783 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
CTDNEP1-211ENST00000575783 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.42
CTDNEP1-211ENST00000575783 SPCS1Q9Y6A9 102 aa6.12□□□□□ -1.43
CTDNEP1-211ENST00000575783 BATFQ16520 125 aa6.11□□□□□ -1.43
CTDNEP1-211ENST00000575783 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
CTDNEP1-211ENST00000575783 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
CTDNEP1-211ENST00000575783 MT1EP04732 61 aa6.08□□□□□ -1.44
CTDNEP1-211ENST00000575783 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
CTDNEP1-211ENST00000575783 KRTAP5-7Q6L8G8 165 aa6.05□□□□□ -1.44
CTDNEP1-211ENST00000575783 A0A1W2PPM0 123 aa6.04□□□□□ -1.44
CTDNEP1-211ENST00000575783 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
CTDNEP1-211ENST00000575783 MT-ATP8P03928 68 aa6.03□□□□□ -1.44
CTDNEP1-211ENST00000575783 H0Y9P7 68 aa6.02□□□□□ -1.45
CTDNEP1-211ENST00000575783 ATOX1O00244 68 aa5.99□□□□□ -1.45
CTDNEP1-211ENST00000575783 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
CTDNEP1-211ENST00000575783 UQCRQO14949 82 aa5.96□□□□□ -1.46
CTDNEP1-211ENST00000575783 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
CTDNEP1-211ENST00000575783 TAX1BP3O14907 124 aa5.94□□□□□ -1.46
CTDNEP1-211ENST00000575783 MT1GP13640 62 aa5.94□□□□□ -1.46
CTDNEP1-211ENST00000575783 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
CTDNEP1-211ENST00000575783 KRTAP5-4Q6L8H1 288 aa5.9□□□□□ -1.46
CTDNEP1-211ENST00000575783 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
CTDNEP1-211ENST00000575783 LINC00208Q96KT6 92 aa5.88□□□□□ -1.47
CTDNEP1-211ENST00000575783 PCP4L1A6NKN8 68 aa5.85□□□□□ -1.47
CTDNEP1-211ENST00000575783 MT1MQ8N339 61 aa5.83□□□□□ -1.48
CTDNEP1-211ENST00000575783 PRO0461Q9UI25 63 aa5.82□□□□□ -1.48
CTDNEP1-211ENST00000575783 COL5A1-AS1Q5SY13 56 aa5.81□□□□□ -1.48
CTDNEP1-211ENST00000575783 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
CTDNEP1-211ENST00000575783 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
CTDNEP1-211ENST00000575783 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
CTDNEP1-211ENST00000575783 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
CTDNEP1-211ENST00000575783 DMAC1Q96GE9 116 aa5.74□□□□□ -1.49
CTDNEP1-211ENST00000575783 MP68P56378 58 aa5.72□□□□□ -1.49
CTDNEP1-211ENST00000575783 A0A0D9SG42 100 aa5.71□□□□□ -1.5
CTDNEP1-211ENST00000575783 MT1LQ93083 61 aa5.7□□□□□ -1.5
CTDNEP1-211ENST00000575783 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
CTDNEP1-211ENST00000575783 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
CTDNEP1-211ENST00000575783 ETDBQ3ZM63 59 aa5.63□□□□□ -1.51
CTDNEP1-211ENST00000575783 ATP5EP2Q5VTU8 51 aa5.61□□□□□ -1.51
CTDNEP1-211ENST00000575783 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
CTDNEP1-211ENST00000575783 F8W1H4 67 aa5.59□□□□□ -1.51
CTDNEP1-211ENST00000575783 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
CTDNEP1-211ENST00000575783 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
CTDNEP1-211ENST00000575783 SPTSSBQ8NFR3 76 aa5.57□□□□□ -1.52
CTDNEP1-211ENST00000575783 A0A1B0GV90 55 aa5.54□□□□□ -1.52
CTDNEP1-211ENST00000575783 ACYP2P14621 99 aa5.51□□□□□ -1.53
CTDNEP1-211ENST00000575783 H3BPC8 53 aa5.5□□□□□ -1.53
CTDNEP1-211ENST00000575783 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-211ENST00000575783 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
CTDNEP1-211ENST00000575783 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CTDNEP1-211ENST00000575783 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
CTDNEP1-211ENST00000575783 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
CTDNEP1-211ENST00000575783 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
CTDNEP1-211ENST00000575783 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CTDNEP1-211ENST00000575783 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
CTDNEP1-211ENST00000575783 LINC00643Q86TS7 51 aa5.36□□□□□ -1.55
CTDNEP1-211ENST00000575783 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
CTDNEP1-211ENST00000575783 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-211ENST00000575783 J3QR89 54 aa5.35□□□□□ -1.55
CTDNEP1-211ENST00000575783 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
CTDNEP1-211ENST00000575783 MUC5BQ9HC84 5762 aaPredicted RBP5.34□□□□□ -1.56
CTDNEP1-211ENST00000575783 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
CTDNEP1-211ENST00000575783 K7ERU9 68 aa5.27□□□□□ -1.57
CTDNEP1-211ENST00000575783 SCGB1A1P11684 91 aa5.27□□□□□ -1.57
CTDNEP1-211ENST00000575783 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms