RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
USP6-206ENST00000575709 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
USP6-206ENST00000575709 ZNF469Q96JG9 3925 aaPredicted RBP4.17□□□□□ -1.74
USP6-206ENST00000575709 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
USP6-206ENST00000575709 ANK3Q12955 4377 aaKnown RBP4.15□□□□□ -1.75
USP6-206ENST00000575709 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
USP6-206ENST00000575709 HUWE1Q7Z6Z7 4374 aaKnown RBP4.07□□□□□ -1.76
USP6-206ENST00000575709 CMYA5Q8N3K9 4069 aa4.06□□□□□ -1.76
USP6-206ENST00000575709 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
USP6-206ENST00000575709 LYSTQ99698 3801 aa4.05□□□□□ -1.76
USP6-206ENST00000575709 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
USP6-206ENST00000575709 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
USP6-206ENST00000575709 DNAH1Q9P2D7 4330 aa4□□□□□ -1.77
USP6-206ENST00000575709 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
USP6-206ENST00000575709 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
USP6-206ENST00000575709 DNAH7Q8WXX0 4024 aa3.98□□□□□ -1.77
USP6-206ENST00000575709 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
USP6-206ENST00000575709 DNAH3Q8TD57 4116 aa3.93□□□□□ -1.78
USP6-206ENST00000575709 ANK2Q01484 3957 aa3.92□□□□□ -1.78
USP6-206ENST00000575709 FRAS1Q86XX4 4008 aa3.91□□□□□ -1.78
USP6-206ENST00000575709 KMT2AQ03164 3969 aa3.9□□□□□ -1.78
USP6-206ENST00000575709 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
USP6-206ENST00000575709 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
USP6-206ENST00000575709 DNAH8Q96JB1 4490 aa3.75□□□□□ -1.81
USP6-206ENST00000575709 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
USP6-206ENST00000575709 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
USP6-206ENST00000575709 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
USP6-206ENST00000575709 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
USP6-206ENST00000575709 MT1GP13640 62 aa3.7□□□□□ -1.82
USP6-206ENST00000575709 MT1HP80294 61 aa3.69□□□□□ -1.82
USP6-206ENST00000575709 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
USP6-206ENST00000575709 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
USP6-206ENST00000575709 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
USP6-206ENST00000575709 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
USP6-206ENST00000575709 SPRR2EP22531 72 aa3.64□□□□□ -1.83
USP6-206ENST00000575709 SPRR2BP35325 72 aa3.64□□□□□ -1.83
USP6-206ENST00000575709 SPRR2AP35326 72 aa3.64□□□□□ -1.83
USP6-206ENST00000575709 MT2AP02795 61 aa3.63□□□□□ -1.83
USP6-206ENST00000575709 PRKDCP78527 4128 aaKnown RBP3.61□□□□□ -1.83
USP6-206ENST00000575709 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
USP6-206ENST00000575709 MT3P25713 68 aa3.61□□□□□ -1.83
USP6-206ENST00000575709 PRM1P04553 51 aa3.59□□□□□ -1.83
USP6-206ENST00000575709 MT1FP04733 61 aa3.56□□□□□ -1.84
USP6-206ENST00000575709 DNAH10Q8IVF4 4471 aa3.54□□□□□ -1.84
USP6-206ENST00000575709 DYNC2H1Q8NCM8 4307 aaKnown RBP3.52□□□□□ -1.85
USP6-206ENST00000575709 SPRR2DP22532 72 aa3.51□□□□□ -1.85
USP6-206ENST00000575709 LCE2BO14633 110 aa3.51□□□□□ -1.85
USP6-206ENST00000575709 VPS13DQ5THJ4 4388 aa3.49□□□□□ -1.85
USP6-206ENST00000575709 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
USP6-206ENST00000575709 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
USP6-206ENST00000575709 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
USP6-206ENST00000575709 DNAH17Q9UFH2 4485 aa3.44□□□□□ -1.86
USP6-206ENST00000575709 STARD9Q9P2P6 4700 aa3.38□□□□□ -1.87
USP6-206ENST00000575709 MT1XP80297 61 aa3.37□□□□□ -1.87
USP6-206ENST00000575709 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
USP6-206ENST00000575709 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.87
USP6-206ENST00000575709 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
USP6-206ENST00000575709 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
USP6-206ENST00000575709 LCE2CQ5TA81 110 aa3.32□□□□□ -1.88
USP6-206ENST00000575709 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
USP6-206ENST00000575709 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
USP6-206ENST00000575709 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
USP6-206ENST00000575709 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
USP6-206ENST00000575709 LRP1BQ9NZR2 4599 aa3.27□□□□□ -1.89
USP6-206ENST00000575709 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
USP6-206ENST00000575709 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
USP6-206ENST00000575709 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
USP6-206ENST00000575709 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
USP6-206ENST00000575709 FAT1Q14517 4588 aa3.22□□□□□ -1.89
USP6-206ENST00000575709 PKD1P98161 4303 aa3.21□□□□□ -1.89
USP6-206ENST00000575709 MT4P47944 62 aa3.2□□□□□ -1.9
USP6-206ENST00000575709 MT1LQ93083 61 aa3.2□□□□□ -1.9
USP6-206ENST00000575709 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
USP6-206ENST00000575709 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
USP6-206ENST00000575709 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
USP6-206ENST00000575709 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
USP6-206ENST00000575709 MT1BP07438 61 aa3.13□□□□□ -1.91
USP6-206ENST00000575709 TNXBP22105 4242 aa3.12□□□□□ -1.91
USP6-206ENST00000575709 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
USP6-206ENST00000575709 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
USP6-206ENST00000575709 HSPG2P98160 4391 aa3.08□□□□□ -1.92
USP6-206ENST00000575709 KRTAP9-8Q9BYQ0 159 aa3.07□□□□□ -1.92
USP6-206ENST00000575709 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
USP6-206ENST00000575709 DYNC1H1Q14204 4646 aaKnown RBP3.06□□□□□ -1.92
USP6-206ENST00000575709 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
USP6-206ENST00000575709 FAT3Q8TDW7 4589 aa3.05□□□□□ -1.92
USP6-206ENST00000575709 MT1EP04732 61 aa3.04□□□□□ -1.92
USP6-206ENST00000575709 KRTAP17-1Q9BYP8 105 aa3.02□□□□□ -1.93
USP6-206ENST00000575709 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
USP6-206ENST00000575709 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
USP6-206ENST00000575709 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
USP6-206ENST00000575709 LPAP08519 4548 aa2.99□□□□□ -1.93
USP6-206ENST00000575709 MT1MQ8N339 61 aa2.99□□□□□ -1.93
USP6-206ENST00000575709 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
USP6-206ENST00000575709 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
USP6-206ENST00000575709 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
USP6-206ENST00000575709 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
USP6-206ENST00000575709 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
USP6-206ENST00000575709 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
USP6-206ENST00000575709 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms