RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
TOM1L1-220ENST00000575333 CSMD3Q7Z407 3707 aa4.29□□□□□ -1.72
TOM1L1-220ENST00000575333 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
TOM1L1-220ENST00000575333 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
TOM1L1-220ENST00000575333 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
TOM1L1-220ENST00000575333 PLECQ15149 4684 aaKnown RBP4.24□□□□□ -1.73
TOM1L1-220ENST00000575333 LYSTQ99698 3801 aa4.23□□□□□ -1.73
TOM1L1-220ENST00000575333 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
TOM1L1-220ENST00000575333 SPACA4Q8TDM5 124 aa4.19□□□□□ -1.74
TOM1L1-220ENST00000575333 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
TOM1L1-220ENST00000575333 S4R3F8 94 aa4.18□□□□□ -1.74
TOM1L1-220ENST00000575333 DNAH1Q9P2D7 4330 aa4.18□□□□□ -1.74
TOM1L1-220ENST00000575333 SACSQ9NZJ4 4579 aa4.17□□□□□ -1.74
TOM1L1-220ENST00000575333 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
TOM1L1-220ENST00000575333 VPS13DQ5THJ4 4388 aa4.16□□□□□ -1.74
TOM1L1-220ENST00000575333 UBE2DNLQ8IWF7 75 aa4.14□□□□□ -1.75
TOM1L1-220ENST00000575333 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
TOM1L1-220ENST00000575333 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
TOM1L1-220ENST00000575333 HYDINQ4G0P3 5121 aa4.13□□□□□ -1.75
TOM1L1-220ENST00000575333 A0A0D9SG42 100 aa4.12□□□□□ -1.75
TOM1L1-220ENST00000575333 RYR3Q15413 4870 aa4.12□□□□□ -1.75
TOM1L1-220ENST00000575333 DNAH6Q9C0G6 4158 aa4.12□□□□□ -1.75
TOM1L1-220ENST00000575333 RYR2Q92736 4967 aa4.11□□□□□ -1.75
TOM1L1-220ENST00000575333 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
TOM1L1-220ENST00000575333 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
TOM1L1-220ENST00000575333 DNAH2Q9P225 4427 aa4.09□□□□□ -1.75
TOM1L1-220ENST00000575333 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.76
TOM1L1-220ENST00000575333 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.76
TOM1L1-220ENST00000575333 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
TOM1L1-220ENST00000575333 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
TOM1L1-220ENST00000575333 DNAH10Q8IVF4 4471 aa4.06□□□□□ -1.76
TOM1L1-220ENST00000575333 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
TOM1L1-220ENST00000575333 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
TOM1L1-220ENST00000575333 FAT2Q9NYQ8 4349 aa4.03□□□□□ -1.76
TOM1L1-220ENST00000575333 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
TOM1L1-220ENST00000575333 RPS29P62273 56 aaKnown RBP4□□□□□ -1.77
TOM1L1-220ENST00000575333 HECTD4Q9Y4D8 3996 aa4□□□□□ -1.77
TOM1L1-220ENST00000575333 PKD1P98161 4303 aa4□□□□□ -1.77
TOM1L1-220ENST00000575333 INE1O15225 51 aa4□□□□□ -1.77
TOM1L1-220ENST00000575333 PP632Q6XCG6 107 aa4□□□□□ -1.77
TOM1L1-220ENST00000575333 KRTAP13-2Q52LG2 175 aa3.99□□□□□ -1.77
TOM1L1-220ENST00000575333 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
TOM1L1-220ENST00000575333 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
TOM1L1-220ENST00000575333 EPPK1P58107 5090 aaKnown RBP3.96□□□□□ -1.78
TOM1L1-220ENST00000575333 M0QZ58 72 aa3.96□□□□□ -1.78
TOM1L1-220ENST00000575333 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
TOM1L1-220ENST00000575333 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
TOM1L1-220ENST00000575333 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
TOM1L1-220ENST00000575333 R4GN34 69 aa3.92□□□□□ -1.78
TOM1L1-220ENST00000575333 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
TOM1L1-220ENST00000575333 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
TOM1L1-220ENST00000575333 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.78
TOM1L1-220ENST00000575333 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
TOM1L1-220ENST00000575333 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
TOM1L1-220ENST00000575333 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
TOM1L1-220ENST00000575333 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
TOM1L1-220ENST00000575333 HSPG2P98160 4391 aa3.84□□□□□ -1.8
TOM1L1-220ENST00000575333 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.8
TOM1L1-220ENST00000575333 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
TOM1L1-220ENST00000575333 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
TOM1L1-220ENST00000575333 RYR1P21817 5038 aa3.81□□□□□ -1.8
TOM1L1-220ENST00000575333 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
TOM1L1-220ENST00000575333 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
TOM1L1-220ENST00000575333 FAT1Q14517 4588 aa3.79□□□□□ -1.8
TOM1L1-220ENST00000575333 HERC2O95714 4834 aa3.78□□□□□ -1.8
TOM1L1-220ENST00000575333 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
TOM1L1-220ENST00000575333 C9orf92A6NGG3 77 aa3.76□□□□□ -1.81
TOM1L1-220ENST00000575333 Q5VSD8 79 aa3.74□□□□□ -1.81
TOM1L1-220ENST00000575333 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
TOM1L1-220ENST00000575333 PKHD1L1Q86WI1 4243 aa3.7□□□□□ -1.82
TOM1L1-220ENST00000575333 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
TOM1L1-220ENST00000575333 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
TOM1L1-220ENST00000575333 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
TOM1L1-220ENST00000575333 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
TOM1L1-220ENST00000575333 LRP1Q07954 4544 aaKnown RBP3.64□□□□□ -1.83
TOM1L1-220ENST00000575333 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
TOM1L1-220ENST00000575333 TNXBP22105 4242 aa3.58□□□□□ -1.84
TOM1L1-220ENST00000575333 MT3P25713 68 aa3.56□□□□□ -1.84
TOM1L1-220ENST00000575333 HERC1Q15751 4861 aa3.56□□□□□ -1.84
TOM1L1-220ENST00000575333 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
TOM1L1-220ENST00000575333 TNP1P09430 55 aa3.54□□□□□ -1.84
TOM1L1-220ENST00000575333 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
TOM1L1-220ENST00000575333 LPAP08519 4548 aa3.4□□□□□ -1.86
TOM1L1-220ENST00000575333 LRP2P98164 4655 aa3.39□□□□□ -1.87
TOM1L1-220ENST00000575333 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
TOM1L1-220ENST00000575333 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
TOM1L1-220ENST00000575333 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
TOM1L1-220ENST00000575333 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
TOM1L1-220ENST00000575333 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
TOM1L1-220ENST00000575333 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
TOM1L1-220ENST00000575333 MUC2Q02817 5179 aa3.22□□□□□ -1.89
TOM1L1-220ENST00000575333 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
TOM1L1-220ENST00000575333 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.89
TOM1L1-220ENST00000575333 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
TOM1L1-220ENST00000575333 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
TOM1L1-220ENST00000575333 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
TOM1L1-220ENST00000575333 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
TOM1L1-220ENST00000575333 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
TOM1L1-220ENST00000575333 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
TOM1L1-220ENST00000575333 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms