RNA–Protein interactions for RNA: ENST00000575225.5

NOMO3-213, Transcript of NODAL modulator 3, humanhuman

TSL 1 (best)

Gene NOMO3, Length 3,765 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3-213ENST00000575225 R4GN34 69 aa8.37□□□□□ -1.07
NOMO3-213ENST00000575225 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
NOMO3-213ENST00000575225 KRTAP10-8P60410 259 aa8.34□□□□□ -1.08
NOMO3-213ENST00000575225 XP32Q5T750 250 aa8.33□□□□□ -1.08
NOMO3-213ENST00000575225 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
NOMO3-213ENST00000575225 J3QL48 77 aa8.27□□□□□ -1.08
NOMO3-213ENST00000575225 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
NOMO3-213ENST00000575225 CAMK2N1Q7Z7J9 78 aa8.24□□□□□ -1.09
NOMO3-213ENST00000575225 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.1
NOMO3-213ENST00000575225 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
NOMO3-213ENST00000575225 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
NOMO3-213ENST00000575225 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
NOMO3-213ENST00000575225 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
NOMO3-213ENST00000575225 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
NOMO3-213ENST00000575225 A0A1B0GVY2 172 aa8.14□□□□□ -1.11
NOMO3-213ENST00000575225 PKD1P98161 4303 aa8.09□□□□□ -1.11
NOMO3-213ENST00000575225 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
NOMO3-213ENST00000575225 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
NOMO3-213ENST00000575225 APOBP04114 4563 aaKnown RBP8.04□□□□□ -1.12
NOMO3-213ENST00000575225 KRTAP10-4P60372 401 aaPredicted RBP8.03□□□□□ -1.12
NOMO3-213ENST00000575225 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
NOMO3-213ENST00000575225 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
NOMO3-213ENST00000575225 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
NOMO3-213ENST00000575225 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
NOMO3-213ENST00000575225 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
NOMO3-213ENST00000575225 KIAA1109Q2LD37 5005 aa7.93□□□□□ -1.14
NOMO3-213ENST00000575225 HSPG2P98160 4391 aa7.88□□□□□ -1.15
NOMO3-213ENST00000575225 RYR1P21817 5038 aa7.85□□□□□ -1.15
NOMO3-213ENST00000575225 M0R2T5 61 aa7.84□□□□□ -1.15
NOMO3-213ENST00000575225 LRP2P98164 4655 aa7.81□□□□□ -1.16
NOMO3-213ENST00000575225 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
NOMO3-213ENST00000575225 RYR3Q15413 4870 aa7.77□□□□□ -1.17
NOMO3-213ENST00000575225 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
NOMO3-213ENST00000575225 LPAP08519 4548 aa7.72□□□□□ -1.17
NOMO3-213ENST00000575225 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
NOMO3-213ENST00000575225 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
NOMO3-213ENST00000575225 RYR2Q92736 4967 aa7.68□□□□□ -1.18
NOMO3-213ENST00000575225 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
NOMO3-213ENST00000575225 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
NOMO3-213ENST00000575225 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
NOMO3-213ENST00000575225 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
NOMO3-213ENST00000575225 TNP1P09430 55 aa7.51□□□□□ -1.21
NOMO3-213ENST00000575225 EPPK1P58107 5090 aaKnown RBP7.48□□□□□ -1.21
NOMO3-213ENST00000575225 TNXBP22105 4242 aa7.47□□□□□ -1.21
NOMO3-213ENST00000575225 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
NOMO3-213ENST00000575225 MUC2Q02817 5179 aa7.44□□□□□ -1.22
NOMO3-213ENST00000575225 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
NOMO3-213ENST00000575225 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
NOMO3-213ENST00000575225 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
NOMO3-213ENST00000575225 HERC2O95714 4834 aa7.18□□□□□ -1.26
NOMO3-213ENST00000575225 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
NOMO3-213ENST00000575225 HERC1Q15751 4861 aa7□□□□□ -1.29
NOMO3-213ENST00000575225 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
NOMO3-213ENST00000575225 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
NOMO3-213ENST00000575225 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
NOMO3-213ENST00000575225 PCLOQ9Y6V0 5065 aa6.73□□□□□ -1.33
NOMO3-213ENST00000575225 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.33
NOMO3-213ENST00000575225 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
NOMO3-213ENST00000575225 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
NOMO3-213ENST00000575225 KRTAP19-2Q3LHN2 52 aa6.6□□□□□ -1.35
NOMO3-213ENST00000575225 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
NOMO3-213ENST00000575225 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
NOMO3-213ENST00000575225 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
NOMO3-213ENST00000575225 MT1FP04733 61 aa6.56□□□□□ -1.36
NOMO3-213ENST00000575225 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
NOMO3-213ENST00000575225 MT1HP80294 61 aa6.54□□□□□ -1.36
NOMO3-213ENST00000575225 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
NOMO3-213ENST00000575225 MT2AP02795 61 aa6.52□□□□□ -1.37
NOMO3-213ENST00000575225 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
NOMO3-213ENST00000575225 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
NOMO3-213ENST00000575225 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
NOMO3-213ENST00000575225 LCE2CQ5TA81 110 aa6.4□□□□□ -1.39
NOMO3-213ENST00000575225 USH2AO75445 5202 aa6.35□□□□□ -1.39
NOMO3-213ENST00000575225 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
NOMO3-213ENST00000575225 KMT2DO14686 5537 aa6.26□□□□□ -1.41
NOMO3-213ENST00000575225 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
NOMO3-213ENST00000575225 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
NOMO3-213ENST00000575225 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
NOMO3-213ENST00000575225 MT1XP80297 61 aa6.21□□□□□ -1.42
NOMO3-213ENST00000575225 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
NOMO3-213ENST00000575225 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
NOMO3-213ENST00000575225 MT1BP07438 61 aa6.18□□□□□ -1.42
NOMO3-213ENST00000575225 INE1O15225 51 aa6.16□□□□□ -1.42
NOMO3-213ENST00000575225 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
NOMO3-213ENST00000575225 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
NOMO3-213ENST00000575225 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
NOMO3-213ENST00000575225 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
NOMO3-213ENST00000575225 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
NOMO3-213ENST00000575225 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
NOMO3-213ENST00000575225 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
NOMO3-213ENST00000575225 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
NOMO3-213ENST00000575225 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
NOMO3-213ENST00000575225 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
NOMO3-213ENST00000575225 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
NOMO3-213ENST00000575225 LCE2BO14633 110 aa5.83□□□□□ -1.48
NOMO3-213ENST00000575225 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
NOMO3-213ENST00000575225 MT1GP13640 62 aa5.56□□□□□ -1.52
NOMO3-213ENST00000575225 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
NOMO3-213ENST00000575225 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
NOMO3-213ENST00000575225 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms