RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 J3KT08 172 aa4.33□□□□□ -1.72
NPLOC4-210ENST00000572824 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
NPLOC4-210ENST00000572824 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
NPLOC4-210ENST00000572824 UQCRQO14949 82 aa4.31□□□□□ -1.72
NPLOC4-210ENST00000572824 LOC110117498A0A087WWA1 95 aa4.3□□□□□ -1.72
NPLOC4-210ENST00000572824 K7EQZ3 153 aa4.29□□□□□ -1.72
NPLOC4-210ENST00000572824 NDUFB1O75438 58 aa4.29□□□□□ -1.72
NPLOC4-210ENST00000572824 ACYP1P07311 99 aa4.29□□□□□ -1.72
NPLOC4-210ENST00000572824 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
NPLOC4-210ENST00000572824 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
NPLOC4-210ENST00000572824 H3BT86 120 aa4.28□□□□□ -1.72
NPLOC4-210ENST00000572824 HIST1H4AP62805 103 aaKnown RBP4.28□□□□□ -1.72
NPLOC4-210ENST00000572824 Q5W150 140 aa4.28□□□□□ -1.72
NPLOC4-210ENST00000572824 ATXN8Q156A1 80 aa4.27□□□□□ -1.73
NPLOC4-210ENST00000572824 MRPL34Q9BQ48 92 aaKnown RBP4.27□□□□□ -1.73
NPLOC4-210ENST00000572824 COX7CP15954 63 aa4.26□□□□□ -1.73
NPLOC4-210ENST00000572824 TMEM258P61165 79 aa4.26□□□□□ -1.73
NPLOC4-210ENST00000572824 Q8N9L7 120 aa4.26□□□□□ -1.73
NPLOC4-210ENST00000572824 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
NPLOC4-210ENST00000572824 NEBP20929 6669 aa4.26□□□□□ -1.73
NPLOC4-210ENST00000572824 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
NPLOC4-210ENST00000572824 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
NPLOC4-210ENST00000572824 NDUFS5O43920 106 aa4.24□□□□□ -1.73
NPLOC4-210ENST00000572824 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
NPLOC4-210ENST00000572824 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
NPLOC4-210ENST00000572824 JMJD7-PLA2G4BH0Y9G9 81 aa4.23□□□□□ -1.73
NPLOC4-210ENST00000572824 NREPQ16612 68 aa4.23□□□□□ -1.73
NPLOC4-210ENST00000572824 FAM236AA0A1B0GUQ0 79 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 FAM236BA0A1B0GV22 79 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 ATOX1O00244 68 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 BPY2O14599 106 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 MT1BP07438 61 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
NPLOC4-210ENST00000572824 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
NPLOC4-210ENST00000572824 LINC00846Q9NV44 126 aa4.19□□□□□ -1.74
NPLOC4-210ENST00000572824 CXCL6P80162 114 aa4.18□□□□□ -1.74
NPLOC4-210ENST00000572824 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
NPLOC4-210ENST00000572824 A0A1B0GW54 56 aa4.17□□□□□ -1.74
NPLOC4-210ENST00000572824 HCG22E2RYF7 251 aa4.17□□□□□ -1.74
NPLOC4-210ENST00000572824 PDE6GP18545 87 aa4.17□□□□□ -1.74
NPLOC4-210ENST00000572824 SERP2Q8N6R1 65 aa4.17□□□□□ -1.74
NPLOC4-210ENST00000572824 CASC2Q6XLA1 102 aa4.14□□□□□ -1.75
NPLOC4-210ENST00000572824 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
NPLOC4-210ENST00000572824 KMT2DO14686 5537 aa4.12□□□□□ -1.75
NPLOC4-210ENST00000572824 A6NN06 94 aa4.12□□□□□ -1.75
NPLOC4-210ENST00000572824 CYSTM1Q9H1C7 97 aa4.12□□□□□ -1.75
NPLOC4-210ENST00000572824 SERP1Q9Y6X1 66 aa4.12□□□□□ -1.75
NPLOC4-210ENST00000572824 SEC61GP60059 68 aa4.11□□□□□ -1.75
NPLOC4-210ENST00000572824 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
NPLOC4-210ENST00000572824 LCA10Q71F78 164 aa4.11□□□□□ -1.75
NPLOC4-210ENST00000572824 A0A087WVE0 104 aa4.1□□□□□ -1.75
NPLOC4-210ENST00000572824 S4R3F8 94 aa4.1□□□□□ -1.75
NPLOC4-210ENST00000572824 SMIM26A0A096LP01 95 aa4.09□□□□□ -1.75
NPLOC4-210ENST00000572824 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
NPLOC4-210ENST00000572824 A8MU10 97 aa4.08□□□□□ -1.76
NPLOC4-210ENST00000572824 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
NPLOC4-210ENST00000572824 Q5VV11 94 aa4.08□□□□□ -1.76
NPLOC4-210ENST00000572824 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
NPLOC4-210ENST00000572824 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
NPLOC4-210ENST00000572824 V9GYY9 64 aa4.07□□□□□ -1.76
NPLOC4-210ENST00000572824 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
NPLOC4-210ENST00000572824 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
NPLOC4-210ENST00000572824 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
NPLOC4-210ENST00000572824 H7BZZ5 65 aa4.05□□□□□ -1.76
NPLOC4-210ENST00000572824 NDUFC1O43677 76 aa4.03□□□□□ -1.76
NPLOC4-210ENST00000572824 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
NPLOC4-210ENST00000572824 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
NPLOC4-210ENST00000572824 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
NPLOC4-210ENST00000572824 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
NPLOC4-210ENST00000572824 UBL5Q9BZL1 73 aa3.97□□□□□ -1.77
NPLOC4-210ENST00000572824 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
NPLOC4-210ENST00000572824 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
NPLOC4-210ENST00000572824 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
NPLOC4-210ENST00000572824 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
NPLOC4-210ENST00000572824 MT1XP80297 61 aa3.91□□□□□ -1.78
NPLOC4-210ENST00000572824 Q1T7F1 81 aa3.91□□□□□ -1.78
NPLOC4-210ENST00000572824 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
NPLOC4-210ENST00000572824 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.79
NPLOC4-210ENST00000572824 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
NPLOC4-210ENST00000572824 TRAV22A0A0B4J277 110 aa3.88□□□□□ -1.79
NPLOC4-210ENST00000572824 SPRR2EP22531 72 aa3.87□□□□□ -1.79
NPLOC4-210ENST00000572824 SPRR2BP35325 72 aa3.87□□□□□ -1.79
NPLOC4-210ENST00000572824 SPRR2AP35326 72 aa3.87□□□□□ -1.79
NPLOC4-210ENST00000572824 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
NPLOC4-210ENST00000572824 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
NPLOC4-210ENST00000572824 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.79
NPLOC4-210ENST00000572824 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
NPLOC4-210ENST00000572824 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
NPLOC4-210ENST00000572824 H0Y9P7 68 aa3.83□□□□□ -1.8
NPLOC4-210ENST00000572824 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
NPLOC4-210ENST00000572824 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
NPLOC4-210ENST00000572824 A8MUN3 132 aa3.81□□□□□ -1.8
NPLOC4-210ENST00000572824 H0YAA0 97 aa3.81□□□□□ -1.8
NPLOC4-210ENST00000572824 P0C880 135 aa3.81□□□□□ -1.8
NPLOC4-210ENST00000572824 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
NPLOC4-210ENST00000572824 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
NPLOC4-210ENST00000572824 LINC00208Q96KT6 92 aa3.75□□□□□ -1.81
NPLOC4-210ENST00000572824 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
NPLOC4-210ENST00000572824 M0QZ58 72 aa3.73□□□□□ -1.81
NPLOC4-210ENST00000572824 SPRR2DP22532 72 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms