RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 LYSTQ99698 3801 aa6.67□□□□□ -1.34
TRPV1-206ENST00000571088 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
TRPV1-206ENST00000571088 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
TRPV1-206ENST00000571088 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
TRPV1-206ENST00000571088 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
TRPV1-206ENST00000571088 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
TRPV1-206ENST00000571088 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
TRPV1-206ENST00000571088 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
TRPV1-206ENST00000571088 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
TRPV1-206ENST00000571088 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
TRPV1-206ENST00000571088 ALMS1Q8TCU4 4167 aa6.56□□□□□ -1.36
TRPV1-206ENST00000571088 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
TRPV1-206ENST00000571088 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
TRPV1-206ENST00000571088 HECTD4Q9Y4D8 3996 aa6.52□□□□□ -1.37
TRPV1-206ENST00000571088 FRAS1Q86XX4 4008 aa6.52□□□□□ -1.37
TRPV1-206ENST00000571088 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
TRPV1-206ENST00000571088 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
TRPV1-206ENST00000571088 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
TRPV1-206ENST00000571088 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
TRPV1-206ENST00000571088 DNHD1Q96M86 4753 aa6.35□□□□□ -1.39
TRPV1-206ENST00000571088 FAT1Q14517 4588 aa6.35□□□□□ -1.39
TRPV1-206ENST00000571088 SACSQ9NZJ4 4579 aa6.31□□□□□ -1.4
TRPV1-206ENST00000571088 FAT2Q9NYQ8 4349 aa6.21□□□□□ -1.41
TRPV1-206ENST00000571088 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
TRPV1-206ENST00000571088 PKD1P98161 4303 aa6.09□□□□□ -1.44
TRPV1-206ENST00000571088 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
TRPV1-206ENST00000571088 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
TRPV1-206ENST00000571088 PKHD1P08F94 4074 aa6.05□□□□□ -1.44
TRPV1-206ENST00000571088 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
TRPV1-206ENST00000571088 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
TRPV1-206ENST00000571088 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
TRPV1-206ENST00000571088 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
TRPV1-206ENST00000571088 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
TRPV1-206ENST00000571088 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
TRPV1-206ENST00000571088 RYR1P21817 5038 aa5.88□□□□□ -1.47
TRPV1-206ENST00000571088 KIAA1109Q2LD37 5005 aa5.88□□□□□ -1.47
TRPV1-206ENST00000571088 INE1O15225 51 aa5.87□□□□□ -1.47
TRPV1-206ENST00000571088 RYR2Q92736 4967 aa5.86□□□□□ -1.47
TRPV1-206ENST00000571088 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
TRPV1-206ENST00000571088 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
TRPV1-206ENST00000571088 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
TRPV1-206ENST00000571088 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
TRPV1-206ENST00000571088 RYR3Q15413 4870 aa5.8□□□□□ -1.48
TRPV1-206ENST00000571088 LRP2P98164 4655 aa5.75□□□□□ -1.49
TRPV1-206ENST00000571088 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
TRPV1-206ENST00000571088 HSPG2P98160 4391 aa5.73□□□□□ -1.49
TRPV1-206ENST00000571088 TNXBP22105 4242 aa5.68□□□□□ -1.5
TRPV1-206ENST00000571088 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
TRPV1-206ENST00000571088 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
TRPV1-206ENST00000571088 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
TRPV1-206ENST00000571088 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
TRPV1-206ENST00000571088 LPAP08519 4548 aa5.5□□□□□ -1.53
TRPV1-206ENST00000571088 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.54
TRPV1-206ENST00000571088 MT1HP80294 61 aa5.4□□□□□ -1.55
TRPV1-206ENST00000571088 HERC2O95714 4834 aa5.39□□□□□ -1.55
TRPV1-206ENST00000571088 MT2AP02795 61 aa5.38□□□□□ -1.55
TRPV1-206ENST00000571088 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
TRPV1-206ENST00000571088 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
TRPV1-206ENST00000571088 MT1FP04733 61 aa5.33□□□□□ -1.56
TRPV1-206ENST00000571088 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
TRPV1-206ENST00000571088 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.56
TRPV1-206ENST00000571088 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
TRPV1-206ENST00000571088 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
TRPV1-206ENST00000571088 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
TRPV1-206ENST00000571088 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
TRPV1-206ENST00000571088 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
TRPV1-206ENST00000571088 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
TRPV1-206ENST00000571088 HERC1Q15751 4861 aa5.12□□□□□ -1.59
TRPV1-206ENST00000571088 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
TRPV1-206ENST00000571088 BIRC6Q9NR09 4857 aa5.09□□□□□ -1.59
TRPV1-206ENST00000571088 MT1XP80297 61 aa5.09□□□□□ -1.59
TRPV1-206ENST00000571088 MT1BP07438 61 aa5.08□□□□□ -1.6
TRPV1-206ENST00000571088 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
TRPV1-206ENST00000571088 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
TRPV1-206ENST00000571088 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
TRPV1-206ENST00000571088 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
TRPV1-206ENST00000571088 MUC2Q02817 5179 aa4.97□□□□□ -1.61
TRPV1-206ENST00000571088 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
TRPV1-206ENST00000571088 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
TRPV1-206ENST00000571088 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
TRPV1-206ENST00000571088 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
TRPV1-206ENST00000571088 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
TRPV1-206ENST00000571088 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
TRPV1-206ENST00000571088 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
TRPV1-206ENST00000571088 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
TRPV1-206ENST00000571088 LCE2BO14633 110 aa4.69□□□□□ -1.66
TRPV1-206ENST00000571088 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
TRPV1-206ENST00000571088 UBR4Q5T4S7 5183 aa4.65□□□□□ -1.66
TRPV1-206ENST00000571088 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
TRPV1-206ENST00000571088 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
TRPV1-206ENST00000571088 MT1GP13640 62 aa4.53□□□□□ -1.68
TRPV1-206ENST00000571088 MT1LQ93083 61 aa4.5□□□□□ -1.69
TRPV1-206ENST00000571088 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
TRPV1-206ENST00000571088 MT1EP04732 61 aa4.47□□□□□ -1.69
TRPV1-206ENST00000571088 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
TRPV1-206ENST00000571088 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
TRPV1-206ENST00000571088 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
TRPV1-206ENST00000571088 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
TRPV1-206ENST00000571088 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
TRPV1-206ENST00000571088 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms