RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PKD1P98161 4303 aa2.03□□□□□ -2.08
SMG6-208ENST00000570874 KRTAP10-1P60331 282 aa2.03□□□□□ -2.08
SMG6-208ENST00000570874 RPL37AP61513 92 aaKnown RBP2.03□□□□□ -2.08
SMG6-208ENST00000570874 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
SMG6-208ENST00000570874 MEGF8Q7Z7M0 2845 aa2.03□□□□□ -2.09
SMG6-208ENST00000570874 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
SMG6-208ENST00000570874 TP53AIP1Q9HCN2 124 aa2.02□□□□□ -2.09
SMG6-208ENST00000570874 RYR3Q15413 4870 aa2.02□□□□□ -2.09
SMG6-208ENST00000570874 SPRR1BP22528 89 aa2.01□□□□□ -2.09
SMG6-208ENST00000570874 DSCR10P59022 87 aa2.01□□□□□ -2.09
SMG6-208ENST00000570874 KRTAP10-6P60371 365 aaPredicted RBP2.01□□□□□ -2.09
SMG6-208ENST00000570874 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
SMG6-208ENST00000570874 HRES1P13985 223 aa2□□□□□ -2.09
SMG6-208ENST00000570874 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
SMG6-208ENST00000570874 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
SMG6-208ENST00000570874 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
SMG6-208ENST00000570874 PCLOQ9Y6V0 5065 aa1.99□□□□□ -2.09
SMG6-208ENST00000570874 A0A1B0GVY2 172 aa1.99□□□□□ -2.09
SMG6-208ENST00000570874 COA5Q86WW8 74 aa1.99□□□□□ -2.09
SMG6-208ENST00000570874 RYR1P21817 5038 aa1.99□□□□□ -2.09
SMG6-208ENST00000570874 KMT2CQ8NEZ4 4911 aaKnown RBP1.99□□□□□ -2.09
SMG6-208ENST00000570874 K7EQZ3 153 aa1.98□□□□□ -2.09
SMG6-208ENST00000570874 IGFL1Q6UW32 110 aa1.98□□□□□ -2.09
SMG6-208ENST00000570874 Q6ZSA8 131 aa1.98□□□□□ -2.09
SMG6-208ENST00000570874 Q8N9L7 120 aa1.98□□□□□ -2.09
SMG6-208ENST00000570874 Q96NJ1 140 aa1.98□□□□□ -2.09
SMG6-208ENST00000570874 DYNC1H1Q14204 4646 aaKnown RBP1.98□□□□□ -2.09
SMG6-208ENST00000570874 RYR2Q92736 4967 aa1.97□□□□□ -2.09
SMG6-208ENST00000570874 IGKV2D-30A0A075B6S6 120 aa1.97□□□□□ -2.09
SMG6-208ENST00000570874 A0A1B0GU69 56 aa1.97□□□□□ -2.09
SMG6-208ENST00000570874 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
SMG6-208ENST00000570874 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
SMG6-208ENST00000570874 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
SMG6-208ENST00000570874 PKHD1P08F94 4074 aa1.96□□□□□ -2.1
SMG6-208ENST00000570874 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
SMG6-208ENST00000570874 ACYP2P14621 99 aa1.96□□□□□ -2.1
SMG6-208ENST00000570874 LRP1BQ9NZR2 4599 aa1.96□□□□□ -2.1
SMG6-208ENST00000570874 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
SMG6-208ENST00000570874 EPPK1P58107 5090 aaKnown RBP1.95□□□□□ -2.1
SMG6-208ENST00000570874 INE1O15225 51 aa1.95□□□□□ -2.1
SMG6-208ENST00000570874 LINC00304Q8N9R0 145 aa1.95□□□□□ -2.1
SMG6-208ENST00000570874 KRTAP1-4P0C5Y4 121 aa1.94□□□□□ -2.1
SMG6-208ENST00000570874 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
SMG6-208ENST00000570874 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
SMG6-208ENST00000570874 VPS13BQ7Z7G8 4022 aa1.94□□□□□ -2.1
SMG6-208ENST00000570874 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
SMG6-208ENST00000570874 SRRM2Q9UQ35 2752 aaKnown RBP1.93□□□□□ -2.1
SMG6-208ENST00000570874 MMP24-AS1A0A0U1RRL7 71 aa1.92□□□□□ -2.1
SMG6-208ENST00000570874 MRPL34Q9BQ48 92 aaKnown RBP1.92□□□□□ -2.1
SMG6-208ENST00000570874 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
SMG6-208ENST00000570874 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
SMG6-208ENST00000570874 HSPG2P98160 4391 aa1.91□□□□□ -2.1
SMG6-208ENST00000570874 FAT1Q14517 4588 aa1.9□□□□□ -2.11
SMG6-208ENST00000570874 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
SMG6-208ENST00000570874 Q5VSD8 79 aa1.88□□□□□ -2.11
SMG6-208ENST00000570874 PLAC4Q8WY50 150 aa1.87□□□□□ -2.11
SMG6-208ENST00000570874 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
SMG6-208ENST00000570874 HERC2O95714 4834 aa1.86□□□□□ -2.11
SMG6-208ENST00000570874 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
SMG6-208ENST00000570874 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
SMG6-208ENST00000570874 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
SMG6-208ENST00000570874 TNXBP22105 4242 aa1.85□□□□□ -2.11
SMG6-208ENST00000570874 KRTAP13-3Q3SY46 172 aa1.85□□□□□ -2.11
SMG6-208ENST00000570874 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.11
SMG6-208ENST00000570874 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SMG6-208ENST00000570874 KRTAP10-8P60410 259 aa1.83□□□□□ -2.12
SMG6-208ENST00000570874 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
SMG6-208ENST00000570874 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
SMG6-208ENST00000570874 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
SMG6-208ENST00000570874 SPINK1P00995 79 aa1.82□□□□□ -2.12
SMG6-208ENST00000570874 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
SMG6-208ENST00000570874 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
SMG6-208ENST00000570874 CRIPTQ9P021 101 aa1.8□□□□□ -2.12
SMG6-208ENST00000570874 DMBT1Q9UGM3 2413 aaPredicted RBP1.79□□□□□ -2.12
SMG6-208ENST00000570874 KRTAP12-2P59991 146 aa1.78□□□□□ -2.12
SMG6-208ENST00000570874 HERC1Q15751 4861 aa1.78□□□□□ -2.13
SMG6-208ENST00000570874 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
SMG6-208ENST00000570874 KRTAP4-3Q9BYR4 195 aa1.76□□□□□ -2.13
SMG6-208ENST00000570874 LPAP08519 4548 aa1.76□□□□□ -2.13
SMG6-208ENST00000570874 MYCBP2O75592 4640 aa1.76□□□□□ -2.13
SMG6-208ENST00000570874 LCE1AQ5T7P2 110 aa1.74□□□□□ -2.13
SMG6-208ENST00000570874 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
SMG6-208ENST00000570874 ABCA13Q86UQ4 5058 aa1.73□□□□□ -2.13
SMG6-208ENST00000570874 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
SMG6-208ENST00000570874 H1FX-AS1Q4G0G2 97 aa1.71□□□□□ -2.14
SMG6-208ENST00000570874 LRP2P98164 4655 aa1.71□□□□□ -2.14
SMG6-208ENST00000570874 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
SMG6-208ENST00000570874 MUC17Q685J3 4493 aa1.69□□□□□ -2.14
SMG6-208ENST00000570874 MT3P25713 68 aa1.69□□□□□ -2.14
SMG6-208ENST00000570874 H0YAA0 97 aa1.68□□□□□ -2.14
SMG6-208ENST00000570874 MUC2Q02817 5179 aa1.67□□□□□ -2.14
SMG6-208ENST00000570874 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.15
SMG6-208ENST00000570874 M0QZ58 72 aa1.63□□□□□ -2.15
SMG6-208ENST00000570874 KRTAP19-2Q3LHN2 52 aa1.63□□□□□ -2.15
SMG6-208ENST00000570874 S4R3F8 94 aa1.62□□□□□ -2.15
SMG6-208ENST00000570874 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
SMG6-208ENST00000570874 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
SMG6-208ENST00000570874 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
SMG6-208ENST00000570874 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
SMG6-208ENST00000570874 KRTAP9-6A8MVA2 160 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms