RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ROMO1P60602 79 aa7.91□□□□□ -1.14
USP43-202ENST00000570475 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.15
USP43-202ENST00000570475 P0C880 135 aa7.88□□□□□ -1.15
USP43-202ENST00000570475 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
USP43-202ENST00000570475 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
USP43-202ENST00000570475 XP32Q5T750 250 aa7.87□□□□□ -1.15
USP43-202ENST00000570475 SACSQ9NZJ4 4579 aa7.85□□□□□ -1.15
USP43-202ENST00000570475 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
USP43-202ENST00000570475 A0A0A0MQY5 61 aa7.81□□□□□ -1.16
USP43-202ENST00000570475 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
USP43-202ENST00000570475 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
USP43-202ENST00000570475 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
USP43-202ENST00000570475 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
USP43-202ENST00000570475 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
USP43-202ENST00000570475 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
USP43-202ENST00000570475 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
USP43-202ENST00000570475 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
USP43-202ENST00000570475 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
USP43-202ENST00000570475 M0QZ58 72 aa7.65□□□□□ -1.19
USP43-202ENST00000570475 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
USP43-202ENST00000570475 R4GN34 69 aa7.62□□□□□ -1.19
USP43-202ENST00000570475 HSPG2P98160 4391 aa7.61□□□□□ -1.19
USP43-202ENST00000570475 RYR1P21817 5038 aa7.53□□□□□ -1.2
USP43-202ENST00000570475 J3QL48 77 aa7.53□□□□□ -1.2
USP43-202ENST00000570475 RYR2Q92736 4967 aa7.52□□□□□ -1.21
USP43-202ENST00000570475 LRP2P98164 4655 aa7.51□□□□□ -1.21
USP43-202ENST00000570475 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
USP43-202ENST00000570475 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
USP43-202ENST00000570475 KRTAP12-1P59990 96 aa7.5□□□□□ -1.21
USP43-202ENST00000570475 RYR3Q15413 4870 aa7.49□□□□□ -1.21
USP43-202ENST00000570475 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
USP43-202ENST00000570475 LPAP08519 4548 aa7.41□□□□□ -1.22
USP43-202ENST00000570475 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
USP43-202ENST00000570475 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
USP43-202ENST00000570475 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
USP43-202ENST00000570475 TNXBP22105 4242 aa7.33□□□□□ -1.24
USP43-202ENST00000570475 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
USP43-202ENST00000570475 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
USP43-202ENST00000570475 ABCA13Q86UQ4 5058 aa7.18□□□□□ -1.26
USP43-202ENST00000570475 KRTAP15-1Q3LI76 137 aa7.16□□□□□ -1.26
USP43-202ENST00000570475 EPPK1P58107 5090 aaKnown RBP7.14□□□□□ -1.27
USP43-202ENST00000570475 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
USP43-202ENST00000570475 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
USP43-202ENST00000570475 M0R2T5 61 aa7.04□□□□□ -1.28
USP43-202ENST00000570475 MUC2Q02817 5179 aa7.04□□□□□ -1.28
USP43-202ENST00000570475 HERC2O95714 4834 aa6.91□□□□□ -1.3
USP43-202ENST00000570475 TNP1P09430 55 aa6.87□□□□□ -1.31
USP43-202ENST00000570475 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
USP43-202ENST00000570475 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
USP43-202ENST00000570475 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
USP43-202ENST00000570475 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
USP43-202ENST00000570475 KRTAP10-10P60014 251 aa6.65□□□□□ -1.35
USP43-202ENST00000570475 HERC1Q15751 4861 aa6.64□□□□□ -1.35
USP43-202ENST00000570475 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
USP43-202ENST00000570475 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
USP43-202ENST00000570475 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
USP43-202ENST00000570475 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
USP43-202ENST00000570475 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
USP43-202ENST00000570475 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
USP43-202ENST00000570475 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
USP43-202ENST00000570475 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
USP43-202ENST00000570475 HMCN2Q8NDA2 5059 aa6.3□□□□□ -1.4
USP43-202ENST00000570475 MT1HP80294 61 aa6.29□□□□□ -1.4
USP43-202ENST00000570475 MT1FP04733 61 aa6.29□□□□□ -1.4
USP43-202ENST00000570475 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
USP43-202ENST00000570475 MT2AP02795 61 aa6.25□□□□□ -1.41
USP43-202ENST00000570475 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
USP43-202ENST00000570475 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
USP43-202ENST00000570475 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
USP43-202ENST00000570475 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
USP43-202ENST00000570475 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
USP43-202ENST00000570475 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
USP43-202ENST00000570475 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
USP43-202ENST00000570475 MT1XP80297 61 aa5.98□□□□□ -1.45
USP43-202ENST00000570475 MT1BP07438 61 aa5.98□□□□□ -1.45
USP43-202ENST00000570475 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
USP43-202ENST00000570475 USH2AO75445 5202 aa5.97□□□□□ -1.45
USP43-202ENST00000570475 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
USP43-202ENST00000570475 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
USP43-202ENST00000570475 KMT2DO14686 5537 aa5.89□□□□□ -1.47
USP43-202ENST00000570475 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
USP43-202ENST00000570475 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
USP43-202ENST00000570475 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
USP43-202ENST00000570475 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
USP43-202ENST00000570475 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
USP43-202ENST00000570475 LCE2BO14633 110 aa5.66□□□□□ -1.5
USP43-202ENST00000570475 INE1O15225 51 aa5.65□□□□□ -1.51
USP43-202ENST00000570475 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
USP43-202ENST00000570475 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
USP43-202ENST00000570475 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
USP43-202ENST00000570475 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
USP43-202ENST00000570475 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
USP43-202ENST00000570475 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
USP43-202ENST00000570475 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
USP43-202ENST00000570475 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
USP43-202ENST00000570475 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
USP43-202ENST00000570475 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
USP43-202ENST00000570475 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
USP43-202ENST00000570475 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
USP43-202ENST00000570475 MT1LQ93083 61 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms