RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 H3BSH0 61 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 TACC2O95359 2948 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 SNRPGP62308 76 aaKnown RBP0.17□□□□□ -2.38
UBR1-209ENST00000569243 TTTY10Q9BZA0 68 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 DUOX1Q9NRD9 1551 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
UBR1-209ENST00000569243 ANKRD11Q6UB99 2663 aaPredicted RBP0.17□□□□□ -2.38
UBR1-209ENST00000569243 ACACBO00763 2458 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
UBR1-209ENST00000569243 MAP1AP78559 2803 aaPredicted RBP0.16□□□□□ -2.38
UBR1-209ENST00000569243 SPART-AS1P0CW21 52 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 CLPSL2Q6UWE3 100 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 SPTAN1Q13813 2472 aaKnown RBP0.16□□□□□ -2.38
UBR1-209ENST00000569243 USP9YO00507 2555 aaPredicted RBP0.16□□□□□ -2.38
UBR1-209ENST00000569243 TRRAPQ9Y4A5 3859 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 TLN2Q9Y4G6 2542 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 CMYA5Q8N3K9 4069 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 HTTP42858 3142 aa0.16□□□□□ -2.38
UBR1-209ENST00000569243 TGP01266 2768 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 MGAM2Q2M2H8 2515 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 WDR87Q6ZQQ6 2873 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 C9orf92A6NGG3 77 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 TNP1P09430 55 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 SPRR2BP35325 72 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 DOPEY1Q5JWR5 2465 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 HERC1Q15751 4861 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 NBEAQ8NFP9 2946 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 CRYBG3Q68DQ2 2970 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 MROH2BQ7Z745 1585 aa0.15□□□□□ -2.39
UBR1-209ENST00000569243 DNAH10Q8IVF4 4471 aa0.14□□□□□ -2.39
UBR1-209ENST00000569243 TRIOO75962 3097 aa0.14□□□□□ -2.39
UBR1-209ENST00000569243 ARHGAP5-AS1Q96IT6 56 aa0.14□□□□□ -2.39
UBR1-209ENST00000569243 STAB2Q8WWQ8 2551 aa0.14□□□□□ -2.39
UBR1-209ENST00000569243 DYNC1H1Q14204 4646 aaKnown RBP0.14□□□□□ -2.39
UBR1-209ENST00000569243 CHD7Q9P2D1 2997 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 LAMA1P25391 3075 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 A0A096LNI7 61 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 M0QZ58 72 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 RELNP78509 3460 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 FRYQ5TBA9 3013 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 ZANQ9Y493 2812 aa0.13□□□□□ -2.39
UBR1-209ENST00000569243 SMG1Q96Q15 3661 aaKnown RBP0.12□□□□□ -2.39
UBR1-209ENST00000569243 CELSR3Q9NYQ7 3312 aa0.12□□□□□ -2.39
UBR1-209ENST00000569243 GCC2Q8IWJ2 1684 aa0.12□□□□□ -2.39
UBR1-209ENST00000569243 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
UBR1-209ENST00000569243 ITPR1Q14643 2758 aa0.12□□□□□ -2.39
UBR1-209ENST00000569243 MXRA5Q9NR99 2828 aa0.12□□□□□ -2.39
UBR1-209ENST00000569243 CSMD1Q96PZ7 3565 aa0.11□□□□□ -2.39
UBR1-209ENST00000569243 STARD9Q9P2P6 4700 aa0.11□□□□□ -2.39
UBR1-209ENST00000569243 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
UBR1-209ENST00000569243 ITPR3Q14573 2671 aa0.11□□□□□ -2.39
UBR1-209ENST00000569243 CFAP46Q8IYW2 2715 aa0.11□□□□□ -2.39
UBR1-209ENST00000569243 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 DNHD1Q96M86 4753 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 PCLOQ9Y6V0 5065 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 DNAH5Q8TE73 4624 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 SPRR2AP35326 72 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 CEP250Q9BV73 2442 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 DNAH17Q9UFH2 4485 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 ADGRG4Q8IZF6 3080 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 VPS13CQ709C8 3753 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 MUC2Q02817 5179 aa0.1□□□□□ -2.39
UBR1-209ENST00000569243 C5orf42Q9H799 3197 aa0.09□□□□□ -2.39
UBR1-209ENST00000569243 SPRR2EP22531 72 aa0.09□□□□□ -2.4
UBR1-209ENST00000569243 DEFB1P60022 68 aa0.09□□□□□ -2.4
UBR1-209ENST00000569243 TEX15Q9BXT5 2789 aa0.09□□□□□ -2.4
UBR1-209ENST00000569243 MYO9AB2RTY4 2548 aa0.09□□□□□ -2.4
UBR1-209ENST00000569243 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 MUC17Q685J3 4493 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 SMR3BP02814 79 aaPredicted RBP0.08□□□□□ -2.4
UBR1-209ENST00000569243 MT1AP04731 61 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 HTN1P15515 57 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 SPRR2FQ96RM1 72 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 UBR4Q5T4S7 5183 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 DMDP11532 3685 aa0.08□□□□□ -2.4
UBR1-209ENST00000569243 MGAQ8IWI9 3026 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 TLN1Q9Y490 2541 aaKnown RBP0.07□□□□□ -2.4
UBR1-209ENST00000569243 CFAP54Q96N23 3096 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 DEFB136Q30KP8 78 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 LINC01590Q5TEZ4 76 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 KRTAP8-1Q8IUC2 63 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 RYR1P21817 5038 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 DMXL2Q8TDJ6 3036 aa0.07□□□□□ -2.4
UBR1-209ENST00000569243 USH2AO75445 5202 aa0.06□□□□□ -2.4
UBR1-209ENST00000569243 PRCDQ00LT1 54 aa0.06□□□□□ -2.4
UBR1-209ENST00000569243 KRTAP19-5Q3LI72 72 aa0.06□□□□□ -2.4
UBR1-209ENST00000569243 KRTAP19-7Q3SYF9 63 aa0.06□□□□□ -2.4
UBR1-209ENST00000569243 LRBAP50851 2863 aa0.06□□□□□ -2.4
UBR1-209ENST00000569243 DEFB108AA8MXU0 73 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 DEFB4AO15263 64 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 APELAP0DMC3 54 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 KRTAP19-8Q3LI54 63 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 RHPN1-AS1Q9BWJ2 59 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 SRCAPQ6ZRS2 3230 aa0.05□□□□□ -2.4
UBR1-209ENST00000569243 SZT2Q5T011 3432 aa0.04□□□□□ -2.4
UBR1-209ENST00000569243 RPL39P5Q59GN2 51 aa0.04□□□□□ -2.4
UBR1-209ENST00000569243 LAMA3Q16787 3333 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms