RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
AC009041.2-204ENST00000568394 RPL37P61927 97 aaKnown RBP10.53□□□□□ -0.72
AC009041.2-204ENST00000568394 NDUFAF8A1L188 74 aa10.52□□□□□ -0.73
AC009041.2-204ENST00000568394 TPRXLQ17RH7 258 aa10.42□□□□□ -0.74
AC009041.2-204ENST00000568394 RYR3Q15413 4870 aa10.38□□□□□ -0.75
AC009041.2-204ENST00000568394 C20orf166-AS1Q96NR2 134 aa10.37□□□□□ -0.75
AC009041.2-204ENST00000568394 KRTAP13-4Q3LI77 160 aa10.37□□□□□ -0.75
AC009041.2-204ENST00000568394 RYR2Q92736 4967 aa10.34□□□□□ -0.75
AC009041.2-204ENST00000568394 Q5VSD8 79 aa10.34□□□□□ -0.75
AC009041.2-204ENST00000568394 RYR1P21817 5038 aa10.29□□□□□ -0.76
AC009041.2-204ENST00000568394 A0A1B0GVY2 172 aa10.24□□□□□ -0.77
AC009041.2-204ENST00000568394 KRTAP10-6P60371 365 aaPredicted RBP10.22□□□□□ -0.77
AC009041.2-204ENST00000568394 KRTAP17-1Q9BYP8 105 aa10.2□□□□□ -0.78
AC009041.2-204ENST00000568394 S4R3F8 94 aa10.2□□□□□ -0.78
AC009041.2-204ENST00000568394 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.78
AC009041.2-204ENST00000568394 HSPG2P98160 4391 aa10.14□□□□□ -0.79
AC009041.2-204ENST00000568394 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
AC009041.2-204ENST00000568394 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
AC009041.2-204ENST00000568394 KRTAP10-4P60372 401 aaPredicted RBP10.12□□□□□ -0.79
AC009041.2-204ENST00000568394 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
AC009041.2-204ENST00000568394 LRP2P98164 4655 aa10.07□□□□□ -0.8
AC009041.2-204ENST00000568394 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
AC009041.2-204ENST00000568394 LPAP08519 4548 aa10.07□□□□□ -0.8
AC009041.2-204ENST00000568394 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
AC009041.2-204ENST00000568394 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
AC009041.2-204ENST00000568394 KRTAP15-1Q3LI76 137 aa10.02□□□□□ -0.81
AC009041.2-204ENST00000568394 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
AC009041.2-204ENST00000568394 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
AC009041.2-204ENST00000568394 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.82
AC009041.2-204ENST00000568394 KRTAP12-1P59990 96 aa9.89□□□□□ -0.83
AC009041.2-204ENST00000568394 MUC2Q02817 5179 aa9.89□□□□□ -0.83
AC009041.2-204ENST00000568394 XP32Q5T750 250 aa9.85□□□□□ -0.83
AC009041.2-204ENST00000568394 M0QZ58 72 aa9.79□□□□□ -0.84
AC009041.2-204ENST00000568394 TNXBP22105 4242 aa9.75□□□□□ -0.85
AC009041.2-204ENST00000568394 J3QL48 77 aa9.71□□□□□ -0.85
AC009041.2-204ENST00000568394 R4GN34 69 aa9.7□□□□□ -0.86
AC009041.2-204ENST00000568394 A0A0A0MQY5 61 aa9.69□□□□□ -0.86
AC009041.2-204ENST00000568394 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
AC009041.2-204ENST00000568394 LUZP6Q538Z0 58 aa9.64□□□□□ -0.87
AC009041.2-204ENST00000568394 PLAC4Q8WY50 150 aa9.62□□□□□ -0.87
AC009041.2-204ENST00000568394 HERC2O95714 4834 aa9.6□□□□□ -0.87
AC009041.2-204ENST00000568394 HERC1Q15751 4861 aa9.51□□□□□ -0.89
AC009041.2-204ENST00000568394 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
AC009041.2-204ENST00000568394 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
AC009041.2-204ENST00000568394 FAT4Q6V0I7 4981 aa9.37□□□□□ -0.91
AC009041.2-204ENST00000568394 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
AC009041.2-204ENST00000568394 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
AC009041.2-204ENST00000568394 PCLOQ9Y6V0 5065 aa9.22□□□□□ -0.93
AC009041.2-204ENST00000568394 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
AC009041.2-204ENST00000568394 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
AC009041.2-204ENST00000568394 M0R2T5 61 aa8.97□□□□□ -0.97
AC009041.2-204ENST00000568394 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
AC009041.2-204ENST00000568394 BIRC6Q9NR09 4857 aa8.88□□□□□ -0.99
AC009041.2-204ENST00000568394 TNP1P09430 55 aa8.86□□□□□ -0.99
AC009041.2-204ENST00000568394 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
AC009041.2-204ENST00000568394 MUC17Q685J3 4493 aa8.81□□□□□ -1
AC009041.2-204ENST00000568394 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.05
AC009041.2-204ENST00000568394 USH2AO75445 5202 aa8.45□□□□□ -1.06
AC009041.2-204ENST00000568394 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
AC009041.2-204ENST00000568394 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
AC009041.2-204ENST00000568394 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
AC009041.2-204ENST00000568394 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
AC009041.2-204ENST00000568394 SPRR5A0A1B0GTR4 108 aa8.26□□□□□ -1.09
AC009041.2-204ENST00000568394 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
AC009041.2-204ENST00000568394 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
AC009041.2-204ENST00000568394 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
AC009041.2-204ENST00000568394 MT1HP80294 61 aa8.16□□□□□ -1.1
AC009041.2-204ENST00000568394 KMT2DO14686 5537 aa8.14□□□□□ -1.11
AC009041.2-204ENST00000568394 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
AC009041.2-204ENST00000568394 MT1FP04733 61 aa8.12□□□□□ -1.11
AC009041.2-204ENST00000568394 MT2AP02795 61 aa8.02□□□□□ -1.13
AC009041.2-204ENST00000568394 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
AC009041.2-204ENST00000568394 INE1O15225 51 aa7.93□□□□□ -1.14
AC009041.2-204ENST00000568394 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
AC009041.2-204ENST00000568394 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
AC009041.2-204ENST00000568394 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
AC009041.2-204ENST00000568394 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
AC009041.2-204ENST00000568394 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
AC009041.2-204ENST00000568394 MT1BP07438 61 aa7.61□□□□□ -1.19
AC009041.2-204ENST00000568394 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
AC009041.2-204ENST00000568394 MT1XP80297 61 aa7.54□□□□□ -1.2
AC009041.2-204ENST00000568394 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
AC009041.2-204ENST00000568394 LCE2BO14633 110 aa7.52□□□□□ -1.21
AC009041.2-204ENST00000568394 DSTQ03001 7570 aaKnown RBP7.49□□□□□ -1.21
AC009041.2-204ENST00000568394 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
AC009041.2-204ENST00000568394 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
AC009041.2-204ENST00000568394 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.21
AC009041.2-204ENST00000568394 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
AC009041.2-204ENST00000568394 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
AC009041.2-204ENST00000568394 OBSCNQ5VST9 7968 aa7.33□□□□□ -1.24
AC009041.2-204ENST00000568394 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
AC009041.2-204ENST00000568394 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
AC009041.2-204ENST00000568394 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
AC009041.2-204ENST00000568394 MUC12Q9UKN1 5478 aa7.24□□□□□ -1.25
AC009041.2-204ENST00000568394 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
AC009041.2-204ENST00000568394 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
AC009041.2-204ENST00000568394 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
AC009041.2-204ENST00000568394 KRTAP9-6A8MVA2 160 aa7.09□□□□□ -1.27
AC009041.2-204ENST00000568394 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
AC009041.2-204ENST00000568394 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms