RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 SSBP3-AS1Q7Z2R9 100 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 BAGE3Q86Y29 109 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
KARS-208ENST00000566772 Q6ZRX8 168 aa2.12□□□□□ -2.07
KARS-208ENST00000566772 KCNQ1DNQ9H478 68 aa2.12□□□□□ -2.07
KARS-208ENST00000566772 SPRR1AP35321 89 aa2.11□□□□□ -2.07
KARS-208ENST00000566772 NPC2P61916 151 aa2.11□□□□□ -2.07
KARS-208ENST00000566772 COPS9Q8WXC6 57 aa2.11□□□□□ -2.07
KARS-208ENST00000566772 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
KARS-208ENST00000566772 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
KARS-208ENST00000566772 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
KARS-208ENST00000566772 LINC01546A6NGU7 62 aa2.1□□□□□ -2.07
KARS-208ENST00000566772 SNCGO76070 127 aa2.1□□□□□ -2.07
KARS-208ENST00000566772 CCKP06307 115 aa2.1□□□□□ -2.07
KARS-208ENST00000566772 MYMXA0A1B0GTQ4 84 aa2.09□□□□□ -2.07
KARS-208ENST00000566772 DEFB105AQ8NG35 78 aa2.09□□□□□ -2.07
KARS-208ENST00000566772 SERP1Q9Y6X1 66 aa2.09□□□□□ -2.07
KARS-208ENST00000566772 RPL37P61927 97 aaKnown RBP2.08□□□□□ -2.08
KARS-208ENST00000566772 C18orf32Q8TCD1 76 aa2.08□□□□□ -2.08
KARS-208ENST00000566772 IFI27L1Q96BM0 104 aa2.08□□□□□ -2.08
KARS-208ENST00000566772 TMEM218A2RU14 115 aa2.07□□□□□ -2.08
KARS-208ENST00000566772 S100A1P23297 94 aa2.07□□□□□ -2.08
KARS-208ENST00000566772 PRO1933Q9H354 126 aa2.07□□□□□ -2.08
KARS-208ENST00000566772 USH2AO75445 5202 aa2.06□□□□□ -2.08
KARS-208ENST00000566772 COX7BP24311 80 aa2.06□□□□□ -2.08
KARS-208ENST00000566772 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
KARS-208ENST00000566772 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
KARS-208ENST00000566772 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
KARS-208ENST00000566772 PLNP26678 52 aa2.05□□□□□ -2.08
KARS-208ENST00000566772 PMCHL2Q9BQD1 86 aa2.05□□□□□ -2.08
KARS-208ENST00000566772 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
KARS-208ENST00000566772 F8WEM9 126 aa2.04□□□□□ -2.08
KARS-208ENST00000566772 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
KARS-208ENST00000566772 APOC3P02656 99 aa2.03□□□□□ -2.08
KARS-208ENST00000566772 SPRR1BP22528 89 aa2.03□□□□□ -2.08
KARS-208ENST00000566772 ELOF1P60002 83 aaKnown RBP2.03□□□□□ -2.08
KARS-208ENST00000566772 Q6ZQY7 126 aa2.03□□□□□ -2.08
KARS-208ENST00000566772 C20orf202A1L168 122 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 LEPROTL1O95214 131 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 LINC00308Q8TCZ7 52 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 LINC00208Q96KT6 92 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 Q96NJ1 140 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 C12orf57Q99622 126 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
KARS-208ENST00000566772 SVBPQ8N300 66 aa2.01□□□□□ -2.09
KARS-208ENST00000566772 SPTSSBQ8NFR3 76 aa2.01□□□□□ -2.09
KARS-208ENST00000566772 ZNF815PA8K554 130 aa2□□□□□ -2.09
KARS-208ENST00000566772 IGLV5-48A0A075B6I7 105 aa1.99□□□□□ -2.09
KARS-208ENST00000566772 MT2AP02795 61 aa1.99□□□□□ -2.09
KARS-208ENST00000566772 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
KARS-208ENST00000566772 LINC00575Q6W349 94 aa1.99□□□□□ -2.09
KARS-208ENST00000566772 TRBV7-7A0A0K0K1E9 115 aa1.98□□□□□ -2.09
KARS-208ENST00000566772 LINC00846Q9NV44 126 aa1.98□□□□□ -2.09
KARS-208ENST00000566772 TRAV13-2A0A0B4J235 113 aa1.97□□□□□ -2.09
KARS-208ENST00000566772 MT1FP04733 61 aa1.97□□□□□ -2.09
KARS-208ENST00000566772 Q6JHZ5 121 aa1.97□□□□□ -2.09
KARS-208ENST00000566772 C14orf144Q96I85 54 aa1.97□□□□□ -2.09
KARS-208ENST00000566772 NEBP20929 6669 aa1.97□□□□□ -2.09
KARS-208ENST00000566772 SYS1-DBNDD2H3BUS1 97 aa1.96□□□□□ -2.1
KARS-208ENST00000566772 H3BUT2 72 aa1.96□□□□□ -2.1
KARS-208ENST00000566772 SMIM11BQ8TCY0 68 aa1.96□□□□□ -2.1
KARS-208ENST00000566772 DSCR8Q96T75 97 aa1.96□□□□□ -2.1
KARS-208ENST00000566772 SNHG12Q9BXW3 62 aa1.96□□□□□ -2.1
KARS-208ENST00000566772 MUSTN1Q8IVN3 82 aa1.95□□□□□ -2.1
KARS-208ENST00000566772 hADV29S1A0JD25 119 aa1.94□□□□□ -2.1
KARS-208ENST00000566772 IFITM1P13164 125 aa1.94□□□□□ -2.1
KARS-208ENST00000566772 KRTDAPP60985 99 aa1.94□□□□□ -2.1
KARS-208ENST00000566772 C20orf197Q8N268 126 aa1.94□□□□□ -2.1
KARS-208ENST00000566772 A0A1W2PPM0 123 aa1.93□□□□□ -2.1
KARS-208ENST00000566772 KLKP1Q107X0 134 aa1.91□□□□□ -2.1
KARS-208ENST00000566772 KRTAP19-6Q3LI70 58 aa1.91□□□□□ -2.1
KARS-208ENST00000566772 C3orf79P0CE67 100 aa1.9□□□□□ -2.11
KARS-208ENST00000566772 BVES-AS1Q5T3Y7 98 aa1.9□□□□□ -2.11
KARS-208ENST00000566772 GTF2H5Q6ZYL4 71 aa1.9□□□□□ -2.11
KARS-208ENST00000566772 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
KARS-208ENST00000566772 SMIM6P0DI80 62 aa1.88□□□□□ -2.11
KARS-208ENST00000566772 WFDC13Q8IUB5 93 aa1.88□□□□□ -2.11
KARS-208ENST00000566772 SPINK7P58062 85 aa1.87□□□□□ -2.11
KARS-208ENST00000566772 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
KARS-208ENST00000566772 HSD52Q0P140 79 aa1.86□□□□□ -2.11
KARS-208ENST00000566772 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
KARS-208ENST00000566772 H0YGX0 51 aa1.85□□□□□ -2.11
KARS-208ENST00000566772 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
KARS-208ENST00000566772 TRBV7-4A0A0J9YYF1 115 aa1.84□□□□□ -2.11
KARS-208ENST00000566772 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
KARS-208ENST00000566772 COX8AP10176 69 aa1.82□□□□□ -2.12
KARS-208ENST00000566772 LINC00472Q9H8W2 130 aa1.82□□□□□ -2.12
KARS-208ENST00000566772 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
KARS-208ENST00000566772 NDUFB1O75438 58 aa1.81□□□□□ -2.12
KARS-208ENST00000566772 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
KARS-208ENST00000566772 Q5VV11 94 aa1.8□□□□□ -2.12
KARS-208ENST00000566772 VAMP8Q9BV40 100 aa1.8□□□□□ -2.12
KARS-208ENST00000566772 PRO1854Q9UHT4 67 aa1.8□□□□□ -2.12
KARS-208ENST00000566772 HIGD1BQ9P298 99 aa1.79□□□□□ -2.12
KARS-208ENST00000566772 KMT2DO14686 5537 aa1.79□□□□□ -2.12
KARS-208ENST00000566772 COX6CP09669 75 aa1.78□□□□□ -2.12
KARS-208ENST00000566772 ATP5EP56381 51 aaPredicted RBP1.78□□□□□ -2.12
KARS-208ENST00000566772 PYY3Q5JQD4 70 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms