RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
SNX29-205ENST00000566228 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
SNX29-205ENST00000566228 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
SNX29-205ENST00000566228 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
SNX29-205ENST00000566228 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
SNX29-205ENST00000566228 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
SNX29-205ENST00000566228 MT1HL1P0DM35 61 aa4.46□□□□□ -1.7
SNX29-205ENST00000566228 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
SNX29-205ENST00000566228 DNAH1Q9P2D7 4330 aa4.45□□□□□ -1.7
SNX29-205ENST00000566228 ANK2Q01484 3957 aa4.44□□□□□ -1.7
SNX29-205ENST00000566228 DNAH3Q8TD57 4116 aa4.44□□□□□ -1.7
SNX29-205ENST00000566228 KRTAP3-3Q9BYR6 98 aa4.41□□□□□ -1.7
SNX29-205ENST00000566228 FRAS1Q86XX4 4008 aa4.41□□□□□ -1.7
SNX29-205ENST00000566228 LYSTQ99698 3801 aa4.38□□□□□ -1.71
SNX29-205ENST00000566228 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
SNX29-205ENST00000566228 DNAH7Q8WXX0 4024 aa4.34□□□□□ -1.72
SNX29-205ENST00000566228 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
SNX29-205ENST00000566228 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
SNX29-205ENST00000566228 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
SNX29-205ENST00000566228 KRTAP10-4P60372 401 aaPredicted RBP4.23□□□□□ -1.73
SNX29-205ENST00000566228 DNAH10Q8IVF4 4471 aa4.22□□□□□ -1.73
SNX29-205ENST00000566228 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
SNX29-205ENST00000566228 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
SNX29-205ENST00000566228 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.75
SNX29-205ENST00000566228 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
SNX29-205ENST00000566228 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
SNX29-205ENST00000566228 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
SNX29-205ENST00000566228 MT3P25713 68 aa4.12□□□□□ -1.75
SNX29-205ENST00000566228 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
SNX29-205ENST00000566228 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SNX29-205ENST00000566228 PLECQ15149 4684 aaKnown RBP4.09□□□□□ -1.75
SNX29-205ENST00000566228 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
SNX29-205ENST00000566228 DYNC2H1Q8NCM8 4307 aaKnown RBP4.09□□□□□ -1.75
SNX29-205ENST00000566228 VPS13DQ5THJ4 4388 aa4.06□□□□□ -1.76
SNX29-205ENST00000566228 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
SNX29-205ENST00000566228 MT1HP80294 61 aa4.02□□□□□ -1.77
SNX29-205ENST00000566228 DNAH17Q9UFH2 4485 aa4□□□□□ -1.77
SNX29-205ENST00000566228 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
SNX29-205ENST00000566228 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
SNX29-205ENST00000566228 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
SNX29-205ENST00000566228 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
SNX29-205ENST00000566228 SPRR2EP22531 72 aa3.92□□□□□ -1.78
SNX29-205ENST00000566228 SPRR2BP35325 72 aa3.92□□□□□ -1.78
SNX29-205ENST00000566228 SPRR2AP35326 72 aa3.92□□□□□ -1.78
SNX29-205ENST00000566228 DNAH5Q8TE73 4624 aa3.91□□□□□ -1.78
SNX29-205ENST00000566228 LCE2BO14633 110 aa3.89□□□□□ -1.79
SNX29-205ENST00000566228 PKHD1P08F94 4074 aa3.88□□□□□ -1.79
SNX29-205ENST00000566228 HSPG2P98160 4391 aa3.85□□□□□ -1.79
SNX29-205ENST00000566228 MT2AP02795 61 aa3.84□□□□□ -1.79
SNX29-205ENST00000566228 SPRR2DP22532 72 aa3.84□□□□□ -1.79
SNX29-205ENST00000566228 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
SNX29-205ENST00000566228 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SNX29-205ENST00000566228 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
SNX29-205ENST00000566228 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SNX29-205ENST00000566228 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
SNX29-205ENST00000566228 MT1FP04733 61 aa3.75□□□□□ -1.81
SNX29-205ENST00000566228 SACSQ9NZJ4 4579 aa3.74□□□□□ -1.81
SNX29-205ENST00000566228 MT1GP13640 62 aa3.73□□□□□ -1.81
SNX29-205ENST00000566228 FAT1Q14517 4588 aa3.72□□□□□ -1.81
SNX29-205ENST00000566228 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
SNX29-205ENST00000566228 LPAP08519 4548 aa3.71□□□□□ -1.82
SNX29-205ENST00000566228 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
SNX29-205ENST00000566228 LCE2CQ5TA81 110 aa3.67□□□□□ -1.82
SNX29-205ENST00000566228 TNXBP22105 4242 aa3.67□□□□□ -1.82
SNX29-205ENST00000566228 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
SNX29-205ENST00000566228 KRTAP19-8Q3LI54 63 aa3.66□□□□□ -1.82
SNX29-205ENST00000566228 PKD1P98161 4303 aa3.64□□□□□ -1.83
SNX29-205ENST00000566228 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
SNX29-205ENST00000566228 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
SNX29-205ENST00000566228 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
SNX29-205ENST00000566228 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
SNX29-205ENST00000566228 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
SNX29-205ENST00000566228 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
SNX29-205ENST00000566228 MT1LQ93083 61 aa3.53□□□□□ -1.84
SNX29-205ENST00000566228 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
SNX29-205ENST00000566228 RYR1P21817 5038 aa3.46□□□□□ -1.86
SNX29-205ENST00000566228 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
SNX29-205ENST00000566228 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
SNX29-205ENST00000566228 MT1XP80297 61 aa3.44□□□□□ -1.86
SNX29-205ENST00000566228 RYR3Q15413 4870 aa3.42□□□□□ -1.86
SNX29-205ENST00000566228 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
SNX29-205ENST00000566228 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
SNX29-205ENST00000566228 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
SNX29-205ENST00000566228 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
SNX29-205ENST00000566228 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
SNX29-205ENST00000566228 PRM1P04553 51 aa3.34□□□□□ -1.87
SNX29-205ENST00000566228 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.88
SNX29-205ENST00000566228 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
SNX29-205ENST00000566228 MT4P47944 62 aa3.32□□□□□ -1.88
SNX29-205ENST00000566228 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
SNX29-205ENST00000566228 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
SNX29-205ENST00000566228 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SNX29-205ENST00000566228 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
SNX29-205ENST00000566228 MT1EP04732 61 aa3.29□□□□□ -1.88
SNX29-205ENST00000566228 MT1BP07438 61 aa3.27□□□□□ -1.89
SNX29-205ENST00000566228 HERC2O95714 4834 aa3.24□□□□□ -1.89
SNX29-205ENST00000566228 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
SNX29-205ENST00000566228 MT1MQ8N339 61 aa3.23□□□□□ -1.89
SNX29-205ENST00000566228 LRP2P98164 4655 aa3.2□□□□□ -1.9
SNX29-205ENST00000566228 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms