RNA–Protein interactions for RNA: ENST00000565215.1

LINC01227-204, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-204ENST00000565215 PKHD1L1Q86WI1 4243 aa0.17□□□□□ -2.38
LINC01227-204ENST00000565215 CCDC168Q8NDH2 2452 aa0.17□□□□□ -2.38
LINC01227-204ENST00000565215 DNAH11Q96DT5 4516 aa0.17□□□□□ -2.38
LINC01227-204ENST00000565215 USP9XQ93008 2570 aaPredicted RBP0.17□□□□□ -2.38
LINC01227-204ENST00000565215 RANBP2P49792 3224 aaKnown RBP0.16□□□□□ -2.38
LINC01227-204ENST00000565215 SPRR2FQ96RM1 72 aa0.16□□□□□ -2.38
LINC01227-204ENST00000565215 MXRA5Q9NR99 2828 aa0.16□□□□□ -2.38
LINC01227-204ENST00000565215 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
LINC01227-204ENST00000565215 USP9YO00507 2555 aaPredicted RBP0.15□□□□□ -2.38
LINC01227-204ENST00000565215 WDR87Q6ZQQ6 2873 aa0.15□□□□□ -2.39
LINC01227-204ENST00000565215 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
LINC01227-204ENST00000565215 GCC2Q8IWJ2 1684 aa0.14□□□□□ -2.39
LINC01227-204ENST00000565215 DNAH2Q9P225 4427 aa0.14□□□□□ -2.39
LINC01227-204ENST00000565215 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
LINC01227-204ENST00000565215 NBPF19A0A087WUL8 3843 aa0.14□□□□□ -2.39
LINC01227-204ENST00000565215 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
LINC01227-204ENST00000565215 SPART-AS1P0CW21 52 aa0.13□□□□□ -2.39
LINC01227-204ENST00000565215 DNAH6Q9C0G6 4158 aa0.13□□□□□ -2.39
LINC01227-204ENST00000565215 ITPR1Q14643 2758 aa0.12□□□□□ -2.39
LINC01227-204ENST00000565215 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
LINC01227-204ENST00000565215 FRYQ5TBA9 3013 aa0.12□□□□□ -2.39
LINC01227-204ENST00000565215 DNAH7Q8WXX0 4024 aa0.12□□□□□ -2.39
LINC01227-204ENST00000565215 RPL39P62891 51 aaKnown RBP0.12□□□□□ -2.39
LINC01227-204ENST00000565215 DYNC2H1Q8NCM8 4307 aaKnown RBP0.12□□□□□ -2.39
LINC01227-204ENST00000565215 SPENQ96T58 3664 aaKnown RBP0.11□□□□□ -2.39
LINC01227-204ENST00000565215 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
LINC01227-204ENST00000565215 LAMA5O15230 3695 aa0.11□□□□□ -2.39
LINC01227-204ENST00000565215 CELSR3Q9NYQ7 3312 aa0.09□□□□□ -2.39
LINC01227-204ENST00000565215 LAMA1P25391 3075 aa0.09□□□□□ -2.39
LINC01227-204ENST00000565215 DNAH1Q9P2D7 4330 aa0.09□□□□□ -2.4
LINC01227-204ENST00000565215 CHD7Q9P2D1 2997 aa0.09□□□□□ -2.4
LINC01227-204ENST00000565215 SPTAN1Q13813 2472 aaKnown RBP0.08□□□□□ -2.4
LINC01227-204ENST00000565215 ITPR3Q14573 2671 aa0.08□□□□□ -2.4
LINC01227-204ENST00000565215 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
LINC01227-204ENST00000565215 TOMM7Q9P0U1 55 aa0.08□□□□□ -2.4
LINC01227-204ENST00000565215 VPS13DQ5THJ4 4388 aa0.07□□□□□ -2.4
LINC01227-204ENST00000565215 CRYBG3Q68DQ2 2970 aa0.07□□□□□ -2.4
LINC01227-204ENST00000565215 SPTBN5Q9NRC6 3674 aaKnown RBP0.07□□□□□ -2.4
LINC01227-204ENST00000565215 TRIOO75962 3097 aa0.07□□□□□ -2.4
LINC01227-204ENST00000565215 RPL39LQ96EH5 51 aaKnown RBP0.07□□□□□ -2.4
LINC01227-204ENST00000565215 DNAH8Q96JB1 4490 aa0.07□□□□□ -2.4
LINC01227-204ENST00000565215 SMR3BP02814 79 aaPredicted RBP0.05□□□□□ -2.4
LINC01227-204ENST00000565215 DEFB1P60022 68 aa0.04□□□□□ -2.4
LINC01227-204ENST00000565215 FAT1Q14517 4588 aa0.03□□□□□ -2.4
LINC01227-204ENST00000565215 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
LINC01227-204ENST00000565215 C5orf42Q9H799 3197 aa0.02□□□□□ -2.41
LINC01227-204ENST00000565215 PCLOQ9Y6V0 5065 aa0.01□□□□□ -2.41
LINC01227-204ENST00000565215 LEAP2Q969E1 77 aa0.01□□□□□ -2.41
LINC01227-204ENST00000565215 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
LINC01227-204ENST00000565215 MT1HP80294 61 aa0□□□□□ -2.41
LINC01227-204ENST00000565215 ADGRG4Q8IZF6 3080 aa0□□□□□ -2.41
LINC01227-204ENST00000565215 CMYA5Q8N3K9 4069 aa0□□□□□ -2.41
LINC01227-204ENST00000565215 ZFHX4Q86UP3 3567 aa-0□□□□□ -2.41
LINC01227-204ENST00000565215 MGAQ8IWI9 3026 aa-0□□□□□ -2.41
LINC01227-204ENST00000565215 HERC1Q15751 4861 aa-0.01□□□□□ -2.41
LINC01227-204ENST00000565215 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
LINC01227-204ENST00000565215 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
LINC01227-204ENST00000565215 RELNP78509 3460 aa-0.01□□□□□ -2.41
LINC01227-204ENST00000565215 LRBAP50851 2863 aa-0.01□□□□□ -2.41
LINC01227-204ENST00000565215 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 LAMA3Q16787 3333 aa-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 MUC2Q02817 5179 aa-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 CEP250Q9BV73 2442 aa-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 TEX15Q9BXT5 2789 aa-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 CSMD1Q96PZ7 3565 aa-0.02□□□□□ -2.41
LINC01227-204ENST00000565215 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
LINC01227-204ENST00000565215 DNAH10Q8IVF4 4471 aa-0.03□□□□□ -2.41
LINC01227-204ENST00000565215 MUC17Q685J3 4493 aa-0.03□□□□□ -2.41
LINC01227-204ENST00000565215 DMXL2Q8TDJ6 3036 aa-0.04□□□□□ -2.42
LINC01227-204ENST00000565215 ARHGAP5-AS1Q96IT6 56 aa-0.04□□□□□ -2.42
LINC01227-204ENST00000565215 PLECQ15149 4684 aaKnown RBP-0.05□□□□□ -2.42
LINC01227-204ENST00000565215 STARD9Q9P2P6 4700 aa-0.05□□□□□ -2.42
LINC01227-204ENST00000565215 KMT2CQ8NEZ4 4911 aaKnown RBP-0.05□□□□□ -2.42
LINC01227-204ENST00000565215 CFAP46Q8IYW2 2715 aa-0.06□□□□□ -2.42
LINC01227-204ENST00000565215 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
LINC01227-204ENST00000565215 MT1EP04732 61 aa-0.07□□□□□ -2.42
LINC01227-204ENST00000565215 DEFB136Q30KP8 78 aa-0.07□□□□□ -2.42
LINC01227-204ENST00000565215 TRRAPQ9Y4A5 3859 aa-0.07□□□□□ -2.42
LINC01227-204ENST00000565215 MUC12Q9UKN1 5478 aa-0.08□□□□□ -2.42
LINC01227-204ENST00000565215 RHPN1-AS1Q9BWJ2 59 aa-0.08□□□□□ -2.42
LINC01227-204ENST00000565215 UBR4Q5T4S7 5183 aa-0.09□□□□□ -2.42
LINC01227-204ENST00000565215 DYNC1H1Q14204 4646 aaKnown RBP-0.09□□□□□ -2.42
LINC01227-204ENST00000565215 DNAH17Q9UFH2 4485 aa-0.09□□□□□ -2.42
LINC01227-204ENST00000565215 CFAP54Q96N23 3096 aa-0.1□□□□□ -2.42
LINC01227-204ENST00000565215 PRCDQ00LT1 54 aa-0.1□□□□□ -2.43
LINC01227-204ENST00000565215 TLN1Q9Y490 2541 aaKnown RBP-0.11□□□□□ -2.43
LINC01227-204ENST00000565215 NIPBLQ6KC79 2804 aaeCLIP-0.11□□□□□ -2.43
LINC01227-204ENST00000565215 MT1LQ93083 61 aa-0.11□□□□□ -2.43
LINC01227-204ENST00000565215 K7EIM0 57 aa-0.12□□□□□ -2.43
LINC01227-204ENST00000565215 DNHD1Q96M86 4753 aa-0.13□□□□□ -2.43
LINC01227-204ENST00000565215 SRCAPQ6ZRS2 3230 aa-0.13□□□□□ -2.43
LINC01227-204ENST00000565215 MT1XP80297 61 aa-0.13□□□□□ -2.43
LINC01227-204ENST00000565215 SMG1Q96Q15 3661 aaKnown RBP-0.13□□□□□ -2.43
LINC01227-204ENST00000565215 DEFB104AQ8WTQ1 72 aa-0.14□□□□□ -2.43
LINC01227-204ENST00000565215 ITPR2Q14571 2701 aa-0.14□□□□□ -2.43
LINC01227-204ENST00000565215 RYR1P21817 5038 aa-0.14□□□□□ -2.43
LINC01227-204ENST00000565215 LAMA2P24043 3122 aaKnown RBP-0.15□□□□□ -2.43
LINC01227-204ENST00000565215 USH2AO75445 5202 aa-0.15□□□□□ -2.43
LINC01227-204ENST00000565215 ATMQ13315 3056 aa-0.15□□□□□ -2.43
LINC01227-204ENST00000565215 PRUNE2Q8WUY3 3088 aa-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms