RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 Q5VV11 94 aa1.99□□□□□ -2.09
CHD9-213ENST00000564845 ROMO1P60602 79 aa1.99□□□□□ -2.09
CHD9-213ENST00000564845 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
CHD9-213ENST00000564845 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
CHD9-213ENST00000564845 Q6ZRN7 208 aaPredicted RBP1.98□□□□□ -2.09
CHD9-213ENST00000564845 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
CHD9-213ENST00000564845 TNP1P09430 55 aa1.98□□□□□ -2.09
CHD9-213ENST00000564845 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
CHD9-213ENST00000564845 Q8N9P0 234 aaPredicted RBP1.97□□□□□ -2.09
CHD9-213ENST00000564845 PLAC4Q8WY50 150 aa1.97□□□□□ -2.09
CHD9-213ENST00000564845 DSCR10P59022 87 aa1.97□□□□□ -2.09
CHD9-213ENST00000564845 A8MU10 97 aa1.96□□□□□ -2.09
CHD9-213ENST00000564845 MMP24-AS1A0A0U1RRL7 71 aa1.96□□□□□ -2.1
CHD9-213ENST00000564845 C4orf26Q17RF5 130 aa1.96□□□□□ -2.1
CHD9-213ENST00000564845 USH2AO75445 5202 aa1.96□□□□□ -2.1
CHD9-213ENST00000564845 H0YAA0 97 aa1.95□□□□□ -2.1
CHD9-213ENST00000564845 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
CHD9-213ENST00000564845 ADM2Q7Z4H4 148 aa1.95□□□□□ -2.1
CHD9-213ENST00000564845 KRTAP4-5Q9BYR2 181 aa1.94□□□□□ -2.1
CHD9-213ENST00000564845 SPINK7P58062 85 aa1.94□□□□□ -2.1
CHD9-213ENST00000564845 KRTAP19-4Q3LI73 84 aa1.94□□□□□ -2.1
CHD9-213ENST00000564845 M0R2T5 61 aa1.93□□□□□ -2.1
CHD9-213ENST00000564845 BIRC6Q9NR09 4857 aa1.93□□□□□ -2.1
CHD9-213ENST00000564845 A6NN06 94 aa1.93□□□□□ -2.1
CHD9-213ENST00000564845 A8MUU9 505 aa1.92□□□□□ -2.1
CHD9-213ENST00000564845 Q5VSD8 79 aa1.92□□□□□ -2.1
CHD9-213ENST00000564845 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
CHD9-213ENST00000564845 Q5W150 140 aa1.91□□□□□ -2.1
CHD9-213ENST00000564845 KRTAP13-2Q52LG2 175 aa1.9□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP29-1A8MX34 341 aaPredicted RBP1.9□□□□□ -2.11
CHD9-213ENST00000564845 Q8N1X5 172 aa1.9□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
CHD9-213ENST00000564845 TNXBP22105 4242 aa1.88□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP10-4P60372 401 aaPredicted RBP1.87□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP23-1A1A580 65 aa1.85□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP16-1A8MUX0 517 aa1.85□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP1-4P0C5Y4 121 aa1.85□□□□□ -2.11
CHD9-213ENST00000564845 KRTAP13-3Q3SY46 172 aa1.85□□□□□ -2.11
CHD9-213ENST00000564845 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
CHD9-213ENST00000564845 A0A1B0GVY2 172 aa1.8□□□□□ -2.12
CHD9-213ENST00000564845 FSIP2Q5CZC0 6907 aa1.79□□□□□ -2.12
CHD9-213ENST00000564845 KRTAP10-8P60410 259 aa1.79□□□□□ -2.12
CHD9-213ENST00000564845 NDUFAF8A1L188 74 aa1.78□□□□□ -2.12
CHD9-213ENST00000564845 A0A0D9SG42 100 aa1.77□□□□□ -2.13
CHD9-213ENST00000564845 INE1O15225 51 aa1.76□□□□□ -2.13
CHD9-213ENST00000564845 XP32Q5T750 250 aa1.76□□□□□ -2.13
CHD9-213ENST00000564845 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
CHD9-213ENST00000564845 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
CHD9-213ENST00000564845 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
CHD9-213ENST00000564845 PRAC1Q96KF2 57 aa1.73□□□□□ -2.13
CHD9-213ENST00000564845 KRTAP3-1Q9BYR8 98 aa1.73□□□□□ -2.13
CHD9-213ENST00000564845 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
CHD9-213ENST00000564845 KMT2DO14686 5537 aa1.72□□□□□ -2.13
CHD9-213ENST00000564845 KRTAP4-1Q9BYQ7 146 aa1.71□□□□□ -2.14
CHD9-213ENST00000564845 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
CHD9-213ENST00000564845 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
CHD9-213ENST00000564845 P0C880 135 aa1.7□□□□□ -2.14
CHD9-213ENST00000564845 LORP23490 312 aaPredicted RBP1.7□□□□□ -2.14
CHD9-213ENST00000564845 H3BS24 57 aa1.65□□□□□ -2.15
CHD9-213ENST00000564845 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
CHD9-213ENST00000564845 KRTAP3-3Q9BYR6 98 aa1.64□□□□□ -2.15
CHD9-213ENST00000564845 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
CHD9-213ENST00000564845 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
CHD9-213ENST00000564845 KRTAP12-2P59991 146 aa1.6□□□□□ -2.15
CHD9-213ENST00000564845 KRTAP3-2Q9BYR7 98 aa1.58□□□□□ -2.16
CHD9-213ENST00000564845 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
CHD9-213ENST00000564845 KRTAP10-10P60014 251 aa1.57□□□□□ -2.16
CHD9-213ENST00000564845 KRTAP10-6P60371 365 aaPredicted RBP1.57□□□□□ -2.16
CHD9-213ENST00000564845 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CHD9-213ENST00000564845 LCE2CQ5TA81 110 aa1.55□□□□□ -2.16
CHD9-213ENST00000564845 MT3P25713 68 aa1.55□□□□□ -2.16
CHD9-213ENST00000564845 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
CHD9-213ENST00000564845 KRTAP10-12P60413 245 aa1.51□□□□□ -2.17
CHD9-213ENST00000564845 KRTAP12-1P59990 96 aa1.51□□□□□ -2.17
CHD9-213ENST00000564845 MT1HP80294 61 aa1.48□□□□□ -2.17
CHD9-213ENST00000564845 MT1FP04733 61 aa1.46□□□□□ -2.18
CHD9-213ENST00000564845 SPRR2GQ9BYE4 73 aa1.45□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP19-1Q8IUB9 90 aa1.45□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP15-1Q3LI76 137 aa1.44□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP4-8A0A0G2JLE6 195 aa1.44□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP4-8Q9BYQ9 185 aa1.44□□□□□ -2.18
CHD9-213ENST00000564845 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
CHD9-213ENST00000564845 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
CHD9-213ENST00000564845 LCE2DQ5TA82 110 aaPredicted RBP1.43□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP9-8Q9BYQ0 159 aa1.41□□□□□ -2.18
CHD9-213ENST00000564845 MT2AP02795 61 aa1.4□□□□□ -2.18
CHD9-213ENST00000564845 KRTAP4-7Q9BYR0 210 aa1.39□□□□□ -2.19
CHD9-213ENST00000564845 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
CHD9-213ENST00000564845 LCE2AQ5TA79 106 aaPredicted RBP1.39□□□□□ -2.19
CHD9-213ENST00000564845 LCE3AQ5TA76 89 aa1.38□□□□□ -2.19
CHD9-213ENST00000564845 LCE2BO14633 110 aa1.38□□□□□ -2.19
CHD9-213ENST00000564845 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
CHD9-213ENST00000564845 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.2
CHD9-213ENST00000564845 MT1BP07438 61 aa1.33□□□□□ -2.2
CHD9-213ENST00000564845 KRTAP10-5P60370 271 aa1.32□□□□□ -2.2
CHD9-213ENST00000564845 KRTAP4-3Q9BYR4 195 aa1.32□□□□□ -2.2
CHD9-213ENST00000564845 KRTAP9-3Q9BYQ3 159 aa1.31□□□□□ -2.2
CHD9-213ENST00000564845 SPRR5A0A1B0GTR4 108 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms