RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 FXYD2P54710 66 aa2.76□□□□□ -1.97
HERPUD1-208ENST00000563911 ADM2Q7Z4H4 148 aa2.76□□□□□ -1.97
HERPUD1-208ENST00000563911 CCKP06307 115 aa2.75□□□□□ -1.97
HERPUD1-208ENST00000563911 RBM3P98179 157 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-208ENST00000563911 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
HERPUD1-208ENST00000563911 MYMXA0A1B0GTQ4 84 aa2.74□□□□□ -1.97
HERPUD1-208ENST00000563911 IFI27L1Q96BM0 104 aa2.74□□□□□ -1.97
HERPUD1-208ENST00000563911 LIMD2Q9BT23 127 aa2.74□□□□□ -1.97
HERPUD1-208ENST00000563911 LOC107984156A0A0G2JMH3 177 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 K7ERS5 55 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 SOSTDC1Q6X4U4 206 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 ARL17AQ8IVW1 177 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
HERPUD1-208ENST00000563911 HRES1P13985 223 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 TSPEAR-AS2P59090 65 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 ATP11AUNQ6ZP68 121 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 CLEC2BQ92478 149 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 CYSTM1Q9H1C7 97 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 R4GN34 69 aa2.72□□□□□ -1.97
HERPUD1-208ENST00000563911 TRAV13-2A0A0B4J235 113 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 A0A0B4J2C4 111 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 H3BQ85 93 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 P0C880 135 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
HERPUD1-208ENST00000563911 A0A1B0GW54 56 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 H7BZZ5 65 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 Q1T7F1 81 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 Q6JHZ5 121 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 OBSCN-AS1Q96MR7 158 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 KMT2DO14686 5537 aa2.7□□□□□ -1.98
HERPUD1-208ENST00000563911 TRAV23DV6A0A075B6W5 121 aa2.69□□□□□ -1.98
HERPUD1-208ENST00000563911 A6NN06 94 aa2.69□□□□□ -1.98
HERPUD1-208ENST00000563911 ATP5EP2Q5VTU8 51 aa2.69□□□□□ -1.98
HERPUD1-208ENST00000563911 DEFB105AQ8NG35 78 aa2.69□□□□□ -1.98
HERPUD1-208ENST00000563911 SFTA2Q6UW10 78 aa2.68□□□□□ -1.98
HERPUD1-208ENST00000563911 C20orf197Q8N268 126 aa2.68□□□□□ -1.98
HERPUD1-208ENST00000563911 C20orf166-AS1Q96NR2 134 aa2.68□□□□□ -1.98
HERPUD1-208ENST00000563911 TRAV7A0A075B6U4 112 aa2.67□□□□□ -1.98
HERPUD1-208ENST00000563911 TEX49A0A1B0GTD5 131 aa2.67□□□□□ -1.98
HERPUD1-208ENST00000563911 LINC01549A6NIU2 74 aa2.67□□□□□ -1.98
HERPUD1-208ENST00000563911 LEPROTO15243 131 aa2.67□□□□□ -1.98
HERPUD1-208ENST00000563911 A8MWP4 228 aa2.66□□□□□ -1.98
HERPUD1-208ENST00000563911 F8WEM9 126 aa2.66□□□□□ -1.98
HERPUD1-208ENST00000563911 LINC00846Q9NV44 126 aa2.66□□□□□ -1.98
HERPUD1-208ENST00000563911 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
HERPUD1-208ENST00000563911 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
HERPUD1-208ENST00000563911 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
HERPUD1-208ENST00000563911 IGLV5-48A0A075B6I7 105 aa2.64□□□□□ -1.99
HERPUD1-208ENST00000563911 COX6CP09669 75 aa2.64□□□□□ -1.99
HERPUD1-208ENST00000563911 ELOF1P60002 83 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-208ENST00000563911 Q96NJ1 140 aa2.64□□□□□ -1.99
HERPUD1-208ENST00000563911 TRAV12-1A0A0B4J245 112 aa2.63□□□□□ -1.99
HERPUD1-208ENST00000563911 A6NED7 52 aa2.63□□□□□ -1.99
HERPUD1-208ENST00000563911 SPTSSBQ8NFR3 76 aa2.63□□□□□ -1.99
HERPUD1-208ENST00000563911 TTTY13Q9BZ97 58 aa2.63□□□□□ -1.99
HERPUD1-208ENST00000563911 ZNF815PA8K554 130 aa2.62□□□□□ -1.99
HERPUD1-208ENST00000563911 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
HERPUD1-208ENST00000563911 COX7BP24311 80 aa2.62□□□□□ -1.99
HERPUD1-208ENST00000563911 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
HERPUD1-208ENST00000563911 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
HERPUD1-208ENST00000563911 HCG22E2RYF7 251 aa2.61□□□□□ -1.99
HERPUD1-208ENST00000563911 DNAL4O96015 105 aa2.61□□□□□ -1.99
HERPUD1-208ENST00000563911 PLNP26678 52 aa2.61□□□□□ -1.99
HERPUD1-208ENST00000563911 CASC2Q6XLA1 102 aa2.61□□□□□ -1.99
HERPUD1-208ENST00000563911 TRAV22A0A0B4J277 110 aa2.6□□□□□ -1.99
HERPUD1-208ENST00000563911 hDV103S1A0JD37 113 aa2.6□□□□□ -1.99
HERPUD1-208ENST00000563911 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
HERPUD1-208ENST00000563911 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
HERPUD1-208ENST00000563911 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
HERPUD1-208ENST00000563911 CHKB-CPT1BH3BT56 60 aa2.58□□□□□ -2
HERPUD1-208ENST00000563911 MT1BP07438 61 aa2.58□□□□□ -2
HERPUD1-208ENST00000563911 Q5VV11 94 aa2.57□□□□□ -2
HERPUD1-208ENST00000563911 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
HERPUD1-208ENST00000563911 A0A087WVE0 104 aa2.56□□□□□ -2
HERPUD1-208ENST00000563911 IGKV3D-7A0A0C4DH55 119 aa2.56□□□□□ -2
HERPUD1-208ENST00000563911 TRBV7-4A0A0J9YYF1 115 aa2.55□□□□□ -2
HERPUD1-208ENST00000563911 MUSTN1Q8IVN3 82 aa2.55□□□□□ -2
HERPUD1-208ENST00000563911 SNURFQ9Y675 71 aa2.55□□□□□ -2
HERPUD1-208ENST00000563911 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
HERPUD1-208ENST00000563911 A0A1B0GU33 70 aa2.54□□□□□ -2
HERPUD1-208ENST00000563911 TMEM254Q8TBM7 123 aa2.54□□□□□ -2
HERPUD1-208ENST00000563911 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
HERPUD1-208ENST00000563911 ROMO1P60602 79 aa2.52□□□□□ -2.01
HERPUD1-208ENST00000563911 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
HERPUD1-208ENST00000563911 LOC101927531A0A1B0GV80 90 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 A0A1W2PNM2 257 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 NREPQ16612 68 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 PRR15LQ9BU68 103 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 UBL5Q9BZL1 73 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
HERPUD1-208ENST00000563911 Q6ZQY7 126 aa2.5□□□□□ -2.01
HERPUD1-208ENST00000563911 NDUFB1O75438 58 aa2.49□□□□□ -2.01
HERPUD1-208ENST00000563911 SPRR2EP22531 72 aa2.49□□□□□ -2.01
HERPUD1-208ENST00000563911 SPRR2BP35325 72 aa2.49□□□□□ -2.01
HERPUD1-208ENST00000563911 SPRR2AP35326 72 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms