RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 S4R3F8 94 aa6.37□□□□□ -1.39
SCAMP2-204ENST00000563829 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
SCAMP2-204ENST00000563829 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
SCAMP2-204ENST00000563829 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
SCAMP2-204ENST00000563829 PKD1P98161 4303 aa6.31□□□□□ -1.4
SCAMP2-204ENST00000563829 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
SCAMP2-204ENST00000563829 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
SCAMP2-204ENST00000563829 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
SCAMP2-204ENST00000563829 XP32Q5T750 250 aa6.2□□□□□ -1.42
SCAMP2-204ENST00000563829 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
SCAMP2-204ENST00000563829 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
SCAMP2-204ENST00000563829 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
SCAMP2-204ENST00000563829 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
SCAMP2-204ENST00000563829 FAT1Q14517 4588 aa6.15□□□□□ -1.43
SCAMP2-204ENST00000563829 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
SCAMP2-204ENST00000563829 HSPG2P98160 4391 aa6.07□□□□□ -1.44
SCAMP2-204ENST00000563829 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
SCAMP2-204ENST00000563829 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
SCAMP2-204ENST00000563829 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
SCAMP2-204ENST00000563829 M0QZ58 72 aa6.02□□□□□ -1.45
SCAMP2-204ENST00000563829 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
SCAMP2-204ENST00000563829 KRTAP10-4P60372 401 aaPredicted RBP5.98□□□□□ -1.45
SCAMP2-204ENST00000563829 LRP1Q07954 4544 aaKnown RBP5.97□□□□□ -1.45
SCAMP2-204ENST00000563829 FAT3Q8TDW7 4589 aa5.96□□□□□ -1.46
SCAMP2-204ENST00000563829 LCE2BO14633 110 aa5.95□□□□□ -1.46
SCAMP2-204ENST00000563829 R4GN34 69 aa5.89□□□□□ -1.47
SCAMP2-204ENST00000563829 LPAP08519 4548 aa5.89□□□□□ -1.47
SCAMP2-204ENST00000563829 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
SCAMP2-204ENST00000563829 TNXBP22105 4242 aa5.8□□□□□ -1.48
SCAMP2-204ENST00000563829 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
SCAMP2-204ENST00000563829 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
SCAMP2-204ENST00000563829 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
SCAMP2-204ENST00000563829 LRP2P98164 4655 aa5.73□□□□□ -1.49
SCAMP2-204ENST00000563829 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
SCAMP2-204ENST00000563829 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
SCAMP2-204ENST00000563829 Q5VSD8 79 aa5.64□□□□□ -1.51
SCAMP2-204ENST00000563829 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
SCAMP2-204ENST00000563829 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
SCAMP2-204ENST00000563829 RYR2Q92736 4967 aa5.58□□□□□ -1.52
SCAMP2-204ENST00000563829 RYR3Q15413 4870 aa5.56□□□□□ -1.52
SCAMP2-204ENST00000563829 SEC61BP60468 96 aaKnown RBP5.51□□□□□ -1.53
SCAMP2-204ENST00000563829 RYR1P21817 5038 aa5.5□□□□□ -1.53
SCAMP2-204ENST00000563829 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
SCAMP2-204ENST00000563829 KRTAP17-1Q9BYP8 105 aa5.48□□□□□ -1.53
SCAMP2-204ENST00000563829 TNP1P09430 55 aa5.45□□□□□ -1.54
SCAMP2-204ENST00000563829 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
SCAMP2-204ENST00000563829 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
SCAMP2-204ENST00000563829 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
SCAMP2-204ENST00000563829 MUC2Q02817 5179 aa5.36□□□□□ -1.55
SCAMP2-204ENST00000563829 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
SCAMP2-204ENST00000563829 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
SCAMP2-204ENST00000563829 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
SCAMP2-204ENST00000563829 KRTAP21-3Q3LHN1 58 aa5.29□□□□□ -1.56
SCAMP2-204ENST00000563829 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
SCAMP2-204ENST00000563829 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
SCAMP2-204ENST00000563829 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
SCAMP2-204ENST00000563829 INE1O15225 51 aa5.16□□□□□ -1.58
SCAMP2-204ENST00000563829 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
SCAMP2-204ENST00000563829 HERC2O95714 4834 aa5.11□□□□□ -1.59
SCAMP2-204ENST00000563829 HERC1Q15751 4861 aa5.07□□□□□ -1.6
SCAMP2-204ENST00000563829 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
SCAMP2-204ENST00000563829 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
SCAMP2-204ENST00000563829 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
SCAMP2-204ENST00000563829 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
SCAMP2-204ENST00000563829 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
SCAMP2-204ENST00000563829 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
SCAMP2-204ENST00000563829 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
SCAMP2-204ENST00000563829 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
SCAMP2-204ENST00000563829 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SCAMP2-204ENST00000563829 M0R2T5 61 aa4.81□□□□□ -1.64
SCAMP2-204ENST00000563829 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
SCAMP2-204ENST00000563829 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
SCAMP2-204ENST00000563829 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
SCAMP2-204ENST00000563829 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
SCAMP2-204ENST00000563829 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
SCAMP2-204ENST00000563829 MT1FP04733 61 aa4.67□□□□□ -1.66
SCAMP2-204ENST00000563829 MT1XP80297 61 aa4.66□□□□□ -1.66
SCAMP2-204ENST00000563829 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
SCAMP2-204ENST00000563829 MT2AP02795 61 aa4.62□□□□□ -1.67
SCAMP2-204ENST00000563829 MT1BP07438 61 aa4.58□□□□□ -1.68
SCAMP2-204ENST00000563829 MT1HP80294 61 aa4.57□□□□□ -1.68
SCAMP2-204ENST00000563829 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
SCAMP2-204ENST00000563829 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
SCAMP2-204ENST00000563829 USH2AO75445 5202 aa4.54□□□□□ -1.68
SCAMP2-204ENST00000563829 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
SCAMP2-204ENST00000563829 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SCAMP2-204ENST00000563829 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
SCAMP2-204ENST00000563829 KMT2DO14686 5537 aa4.47□□□□□ -1.69
SCAMP2-204ENST00000563829 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.69
SCAMP2-204ENST00000563829 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
SCAMP2-204ENST00000563829 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
SCAMP2-204ENST00000563829 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
SCAMP2-204ENST00000563829 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
SCAMP2-204ENST00000563829 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
SCAMP2-204ENST00000563829 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
SCAMP2-204ENST00000563829 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
SCAMP2-204ENST00000563829 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
SCAMP2-204ENST00000563829 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
SCAMP2-204ENST00000563829 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SCAMP2-204ENST00000563829 MT1LQ93083 61 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms