RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-208	ENST00000563688	S100A13	Q99584	98 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	ABCA3	Q99758	1704 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	CFAP74	Q9C0B2	1584 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	ABRACL	Q9P1F3	81 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	TOGARAM1	Q9Y4F4	1720 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	PPL	O60437	1756 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	MYO3A	Q8NEV4	1616 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	POLR1A	O95602	1720 aa	Predicted RBP	-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	LRRIQ1	Q96JM4	1722 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	DNMBP	Q6XZF7	1577 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	EEA1	Q15075	1411 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	ARFGEF2	Q9Y6D5	1785 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688		H0YGX0	51 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	NDUFA4	O00483	81 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB4A	O15263	64 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB130B	P0DP73	79 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB130A	P0DP74	79 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	MINOS1	Q5TGZ0	78 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	NCBP2-AS2	Q69YL0	99 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB106A	Q8N104	65 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	C20orf78	Q9BR46	151 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	NMES1	Q9C002	83 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	C6orf48	Q9UBA6	75 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	PREX2	Q70Z35	1606 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	USP32	Q8NFA0	1604 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	RNF17	Q9BXT8	1623 aa	Known RBP	-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	CC2D2A	Q9P2K1	1620 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	EIF2AK4	Q9P2K8	1649 aa	Known RBP	-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	ARHGAP35	Q9NRY4	1499 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	KIF1A	Q12756	1690 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	NHS	Q6T4R5	1651 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	KDM5D	Q9BY66	1539 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	NRAP	Q86VF7	1730 aa		-0.18	□□□□□ -2.44
SCAPER-208	ENST00000563688	MAST1	Q9Y2H9	1570 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	ANKRD36C	Q5JPF3	1778 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	SCN11A	Q9UI33	1791 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	RRBP1	Q9P2E9	1410 aa	Known RBP	-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	MROH1	Q8NDA8	1641 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688		A0A087WXM4	84 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	MT-ATP8	P03928	68 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	SFTA3	P0C7M3	94 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	FAU	P35544	74 aa	Known RBP	-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	PKIA	P61925	76 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	ADIRF	Q15847	76 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	NREP	Q16612	68 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	S100A16	Q96FQ6	103 aa	Known RBP	-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	ST20	Q9HBF5	79 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	MED14	O60244	1454 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	CFAP43	Q8NDM7	1665 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	ITSN2	Q9NZM3	1697 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	AGL	P35573	1532 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	LMTK2	Q8IWU2	1503 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	UGGT1	Q9NYU2	1555 aa		-0.19	□□□□□ -2.44
SCAPER-208	ENST00000563688	CNTLN	Q9NXG0	1405 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	C3	P01024	1663 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	LY75	O60449	1722 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	RGPD1	P0DJD0	1748 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	RICTOR	Q6R327	1708 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	MYO5C	Q9NQX4	1742 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	PARP4	Q9UKK3	1724 aa	Known RBP	-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	SMIM27	A0A1W2PRY6	76 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	CD52	P31358	61 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	ATXN8	Q156A1	80 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	TRPM2	O94759	1503 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	TIAM1	Q13009	1591 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	DIP2A	Q14689	1571 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	PIK3C2B	O00750	1634 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	KIF14	Q15058	1648 aa		-0.2	□□□□□ -2.44
SCAPER-208	ENST00000563688	DOT1L	Q8TEK3	1739 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688		A0A1B0GUL6	1792 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	NEXMIF	Q5QGS0	1516 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	SMIM13	P0DJ93	91 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	RPS27	P42677	84 aa	Known RBP	-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	CRIP1	P50238	77 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	RPS27L	Q71UM5	84 aa	Known RBP	-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	LEAP2	Q969E1	77 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	RB1CC1	Q8TDY2	1594 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	MROH2A	A6NES4	1674 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	PLCH1	Q4KWH8	1693 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	LMO7	Q8WWI1	1683 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	ANKRD26	Q9UPS8	1709 aa		-0.21	□□□□□ -2.44
SCAPER-208	ENST00000563688	ABCC6	O95255	1503 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	GLI2	P10070	1586 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	NRXN3	Q9Y4C0	1643 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	PDCD5	O14737	125 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	FCER1G	P30273	86 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	TDRG1	Q3Y452	100 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	LINC01590	Q5TEZ4	76 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	C18orf32	Q8TCD1	76 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	C14orf144	Q96I85	54 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	TJP1	Q07157	1748 aa		-0.22	□□□□□ -2.44
SCAPER-208	ENST00000563688	DCAF1	Q9Y4B6	1507 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	KIF21B	O75037	1637 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	SCRIB	Q14160	1630 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	ABCA6	Q8N139	1617 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	ABCA5	Q8WWZ7	1642 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	ADCY10	Q96PN6	1610 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	CROCC2	H7BZ55	1655 aa		-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	FAM208A	Q9UK61	1670 aa	Known RBP	-0.23	□□□□□ -2.45
SCAPER-208	ENST00000563688	AKAP12	Q02952	1782 aa		-0.23	□□□□□ -2.45

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms