RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 BAALC-AS2P0C853 105 aa3.41□□□□□ -1.86
HERPUD1-206ENST00000563343 PDE6GP18545 87 aa3.41□□□□□ -1.86
HERPUD1-206ENST00000563343 SPRR2DP22532 72 aa3.41□□□□□ -1.86
HERPUD1-206ENST00000563343 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
HERPUD1-206ENST00000563343 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
HERPUD1-206ENST00000563343 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
HERPUD1-206ENST00000563343 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
HERPUD1-206ENST00000563343 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
HERPUD1-206ENST00000563343 IGHV6-1A0A0B4J1U7 121 aa3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 SMIM20Q8N5G0 67 aa3.39□□□□□ -1.87
HERPUD1-206ENST00000563343 COX7CP15954 63 aa3.38□□□□□ -1.87
HERPUD1-206ENST00000563343 C8orf87E5RJ46 101 aa3.37□□□□□ -1.87
HERPUD1-206ENST00000563343 TMEM258P61165 79 aa3.37□□□□□ -1.87
HERPUD1-206ENST00000563343 CCKP06307 115 aa3.36□□□□□ -1.87
HERPUD1-206ENST00000563343 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
HERPUD1-206ENST00000563343 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 LOC110117498A0A087WWA1 95 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 A0A1B0GW54 56 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 CCDC179H3BU77 68 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 J3KT08 172 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
HERPUD1-206ENST00000563343 TRBV7-4A0A0J9YYF1 115 aa3.33□□□□□ -1.88
HERPUD1-206ENST00000563343 CXCL6P80162 114 aa3.33□□□□□ -1.88
HERPUD1-206ENST00000563343 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
HERPUD1-206ENST00000563343 C14orf132Q9NPU4 83 aa3.33□□□□□ -1.88
HERPUD1-206ENST00000563343 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
HERPUD1-206ENST00000563343 RBM3P98179 157 aaKnown RBP3.32□□□□□ -1.88
HERPUD1-206ENST00000563343 DSCR8Q96T75 97 aa3.32□□□□□ -1.88
HERPUD1-206ENST00000563343 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
HERPUD1-206ENST00000563343 NDUFC1O43677 76 aa3.31□□□□□ -1.88
HERPUD1-206ENST00000563343 Q6ZQT0 140 aa3.3□□□□□ -1.88
HERPUD1-206ENST00000563343 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
HERPUD1-206ENST00000563343 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
HERPUD1-206ENST00000563343 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
HERPUD1-206ENST00000563343 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
HERPUD1-206ENST00000563343 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-206ENST00000563343 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
HERPUD1-206ENST00000563343 MT1XP80297 61 aa3.24□□□□□ -1.89
HERPUD1-206ENST00000563343 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
HERPUD1-206ENST00000563343 A0A087WVE0 104 aa3.23□□□□□ -1.89
HERPUD1-206ENST00000563343 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
HERPUD1-206ENST00000563343 C20orf197Q8N268 126 aa3.21□□□□□ -1.9
HERPUD1-206ENST00000563343 H7BZZ5 65 aa3.2□□□□□ -1.9
HERPUD1-206ENST00000563343 NREPQ16612 68 aa3.2□□□□□ -1.9
HERPUD1-206ENST00000563343 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
HERPUD1-206ENST00000563343 BPY2O14599 106 aa3.19□□□□□ -1.9
HERPUD1-206ENST00000563343 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
HERPUD1-206ENST00000563343 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
HERPUD1-206ENST00000563343 V9GYY9 64 aa3.19□□□□□ -1.9
HERPUD1-206ENST00000563343 NDUFB1O75438 58 aa3.18□□□□□ -1.9
HERPUD1-206ENST00000563343 LCA10Q71F78 164 aa3.18□□□□□ -1.9
HERPUD1-206ENST00000563343 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
HERPUD1-206ENST00000563343 Q5W150 140 aa3.17□□□□□ -1.9
HERPUD1-206ENST00000563343 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
HERPUD1-206ENST00000563343 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
HERPUD1-206ENST00000563343 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
HERPUD1-206ENST00000563343 S4R3F8 94 aa3.17□□□□□ -1.9
HERPUD1-206ENST00000563343 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
HERPUD1-206ENST00000563343 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-206ENST00000563343 MMP24-AS1A0A0U1RRL7 71 aa3.15□□□□□ -1.91
HERPUD1-206ENST00000563343 H3BPC8 53 aa3.15□□□□□ -1.91
HERPUD1-206ENST00000563343 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
HERPUD1-206ENST00000563343 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
HERPUD1-206ENST00000563343 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
HERPUD1-206ENST00000563343 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
HERPUD1-206ENST00000563343 MT3P25713 68 aa3.11□□□□□ -1.91
HERPUD1-206ENST00000563343 MP68P56378 58 aa3.11□□□□□ -1.91
HERPUD1-206ENST00000563343 hDV103S1A0JD37 113 aa3.1□□□□□ -1.91
HERPUD1-206ENST00000563343 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
HERPUD1-206ENST00000563343 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
HERPUD1-206ENST00000563343 SNURFQ9Y675 71 aa3.1□□□□□ -1.91
HERPUD1-206ENST00000563343 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-206ENST00000563343 NDUFS5O43920 106 aa3.08□□□□□ -1.92
HERPUD1-206ENST00000563343 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
HERPUD1-206ENST00000563343 TP53AIP1Q9HCN2 124 aa3.07□□□□□ -1.92
HERPUD1-206ENST00000563343 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 K7EQZ3 153 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 Q1T7F1 81 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 Q8N9L7 120 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 C1orf64Q8NEQ6 169 aa3.06□□□□□ -1.92
HERPUD1-206ENST00000563343 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
HERPUD1-206ENST00000563343 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
HERPUD1-206ENST00000563343 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
HERPUD1-206ENST00000563343 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
HERPUD1-206ENST00000563343 A8MUN3 132 aa3.03□□□□□ -1.92
HERPUD1-206ENST00000563343 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
HERPUD1-206ENST00000563343 MT4P47944 62 aa3.02□□□□□ -1.93
HERPUD1-206ENST00000563343 H0Y9P7 68 aa3.01□□□□□ -1.93
HERPUD1-206ENST00000563343 H0YAA0 97 aa3□□□□□ -1.93
HERPUD1-206ENST00000563343 BRK1Q8WUW1 75 aa3□□□□□ -1.93
HERPUD1-206ENST00000563343 LINC00208Q96KT6 92 aa3□□□□□ -1.93
HERPUD1-206ENST00000563343 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
HERPUD1-206ENST00000563343 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms