RNA–Protein interactions for RNA: ENST00000563095.5

LPCAT2-203, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 3

Gene LPCAT2, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-203ENST00000563095 PKHD1L1Q86WI1 4243 aa0.4□□□□□ -2.35
LPCAT2-203ENST00000563095 CFAP54Q96N23 3096 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 CACNA1AO00555 2505 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 NCOR2Q9Y618 2525 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 FLNBO75369 2602 aaKnown RBP0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 A0A096LPF7 62 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 LAMA5O15230 3695 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 HIVEP1P15822 2718 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 DNAH2Q9P225 4427 aa0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
LPCAT2-203ENST00000563095 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 SPTBN5Q9NRC6 3674 aaKnown RBP0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 LRP1Q07954 4544 aaKnown RBP0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 SPRR2AP35326 72 aa0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 DEFB108BQ8NET1 73 aa0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 KALRNO60229 2985 aa0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 DNAH3Q8TD57 4116 aa0.38□□□□□ -2.35
LPCAT2-203ENST00000563095 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 TRIOO75962 3097 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 DEFB133Q30KQ1 61 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 HECTD4Q9Y4D8 3996 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 CEP250Q9BV73 2442 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
LPCAT2-203ENST00000563095 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
LPCAT2-203ENST00000563095 PKD1P98161 4303 aa0.36□□□□□ -2.35
LPCAT2-203ENST00000563095 TEP1Q99973 2627 aaKnown RBP0.36□□□□□ -2.35
LPCAT2-203ENST00000563095 NBEAQ8NFP9 2946 aa0.36□□□□□ -2.35
LPCAT2-203ENST00000563095 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
LPCAT2-203ENST00000563095 DMXL2Q8TDJ6 3036 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 APOBP04114 4563 aaKnown RBP0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 FASNP49327 2511 aaKnown RBP0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 TLN2Q9Y4G6 2542 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 SPRR2EP22531 72 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 COX14Q96I36 57 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 MAST4O15021 2626 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 SVEP1Q4LDE5 3571 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
LPCAT2-203ENST00000563095 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.35
LPCAT2-203ENST00000563095 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.35
LPCAT2-203ENST00000563095 ATMQ13315 3056 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 DNAH10Q8IVF4 4471 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 LPAP08519 4548 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 C5orf42Q9H799 3197 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 FRYLO94915 3013 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 DNAH9Q9NYC9 4486 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 LAMA1P25391 3075 aa0.34□□□□□ -2.36
LPCAT2-203ENST00000563095 COL6A3P12111 3177 aa0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 FLGP20930 4061 aaPredicted RBP0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 DNAH6Q9C0G6 4158 aa0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 FAT1Q14517 4588 aa0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 ITPR1Q14643 2758 aa0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 LAMA3Q16787 3333 aa0.33□□□□□ -2.36
LPCAT2-203ENST00000563095 LRBAP50851 2863 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 WDR87Q6ZQQ6 2873 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 FLNAP21333 2647 aaKnown RBP0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 SZT2Q5T011 3432 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 LINC01556Q5JQF7 62 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 USP9XQ93008 2570 aaPredicted RBP0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 ADGRG4Q8IZF6 3080 aa0.32□□□□□ -2.36
LPCAT2-203ENST00000563095 RPS29P62273 56 aaKnown RBP0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 TGP01266 2768 aa0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 NIPBLQ6KC79 2804 aaeCLIP0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 PRUNE2Q8WUY3 3088 aa0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 DNAH1Q9P2D7 4330 aa0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 PLECQ15149 4684 aaKnown RBP0.31□□□□□ -2.36
LPCAT2-203ENST00000563095 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
LPCAT2-203ENST00000563095 HTTP42858 3142 aa0.3□□□□□ -2.36
LPCAT2-203ENST00000563095 SMG1Q96Q15 3661 aaKnown RBP0.3□□□□□ -2.36
LPCAT2-203ENST00000563095 KMT2DO14686 5537 aa0.29□□□□□ -2.36
LPCAT2-203ENST00000563095 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
LPCAT2-203ENST00000563095 MGAM2Q2M2H8 2515 aa0.29□□□□□ -2.36
LPCAT2-203ENST00000563095 CSMD2Q7Z408 3487 aa0.28□□□□□ -2.36
LPCAT2-203ENST00000563095 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
LPCAT2-203ENST00000563095 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.37
LPCAT2-203ENST00000563095 HMCN2Q8NDA2 5059 aa0.27□□□□□ -2.37
LPCAT2-203ENST00000563095 DOPEY1Q5JWR5 2465 aa0.27□□□□□ -2.37
LPCAT2-203ENST00000563095 FSIP2Q5CZC0 6907 aa0.27□□□□□ -2.37
LPCAT2-203ENST00000563095 BOD1L1Q8NFC6 3051 aa0.27□□□□□ -2.37
LPCAT2-203ENST00000563095 DCHS1Q96JQ0 3298 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 HERC1Q15751 4861 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 DMDP11532 3685 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 PKHD1P08F94 4074 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 CFAP46Q8IYW2 2715 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 CD52P31358 61 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 Q9Y3F1 56 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 SPTAN1Q13813 2472 aaKnown RBP0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 CMYA5Q8N3K9 4069 aa0.26□□□□□ -2.37
LPCAT2-203ENST00000563095 ITPR2Q14571 2701 aa0.25□□□□□ -2.37
LPCAT2-203ENST00000563095 DEFB4AO15263 64 aa0.25□□□□□ -2.37
LPCAT2-203ENST00000563095 MT1EP04732 61 aa0.25□□□□□ -2.37
LPCAT2-203ENST00000563095 FREM2Q5SZK8 3169 aa0.24□□□□□ -2.37
LPCAT2-203ENST00000563095 MAP1AP78559 2803 aaPredicted RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms