RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 USP34Q70CQ2 3546 aa-2.01□□□□□ -2.73
DENND4A-205ENST00000562540 CEP250Q9BV73 2442 aa-2.01□□□□□ -2.73
DENND4A-205ENST00000562540 MKI67P46013 3256 aaKnown RBP-2.01□□□□□ -2.73
DENND4A-205ENST00000562540 BVES-AS1Q5T3Y7 98 aa-2.01□□□□□ -2.73
DENND4A-205ENST00000562540 HFM1A2PYH4 1435 aa-2.02□□□□□ -2.73
DENND4A-205ENST00000562540 ARHGAP35Q9NRY4 1499 aa-2.02□□□□□ -2.73
DENND4A-205ENST00000562540 ITSN2Q9NZM3 1697 aa-2.02□□□□□ -2.73
DENND4A-205ENST00000562540 A0A1B0GUL6 1792 aa-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 A8MTW9 85 aa-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 H3BUA1 57 aa-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 RPS27P42677 84 aaKnown RBP-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 MINOS1Q5TGZ0 78 aa-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 RPS27LQ71UM5 84 aaKnown RBP-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 UACAQ9BZF9 1416 aa-2.03□□□□□ -2.73
DENND4A-205ENST00000562540 DNAH14Q0VDD8 3507 aa-2.04□□□□□ -2.74
DENND4A-205ENST00000562540 DNMBPQ6XZF7 1577 aa-2.04□□□□□ -2.74
DENND4A-205ENST00000562540 VPS13CQ709C8 3753 aa-2.04□□□□□ -2.74
DENND4A-205ENST00000562540 M0QY20 66 aa-2.05□□□□□ -2.74
DENND4A-205ENST00000562540 ADIRFQ15847 76 aa-2.05□□□□□ -2.74
DENND4A-205ENST00000562540 ST20Q9HBF5 79 aa-2.05□□□□□ -2.74
DENND4A-205ENST00000562540 KIF1AQ12756 1690 aa-2.06□□□□□ -2.74
DENND4A-205ENST00000562540 PCNTO95613 3336 aa-2.06□□□□□ -2.74
DENND4A-205ENST00000562540 RALGAPBQ86X10 1494 aa-2.06□□□□□ -2.74
DENND4A-205ENST00000562540 NRAPQ86VF7 1730 aa-2.06□□□□□ -2.74
DENND4A-205ENST00000562540 TTC37Q6PGP7 1564 aa-2.06□□□□□ -2.74
DENND4A-205ENST00000562540 LEAP2Q969E1 77 aa-2.08□□□□□ -2.74
DENND4A-205ENST00000562540 KDM5DQ9BY66 1539 aa-2.08□□□□□ -2.74
DENND4A-205ENST00000562540 LRRIQ1Q96JM4 1722 aa-2.08□□□□□ -2.74
DENND4A-205ENST00000562540 H3BUT2 72 aa-2.09□□□□□ -2.74
DENND4A-205ENST00000562540 RNF17Q9BXT8 1623 aaKnown RBP-2.09□□□□□ -2.74
DENND4A-205ENST00000562540 ETDCA0A1B0GVM5 59 aa-2.1□□□□□ -2.75
DENND4A-205ENST00000562540 ENHOQ6UWT2 76 aa-2.11□□□□□ -2.75
DENND4A-205ENST00000562540 ERVK-7P63135 1459 aa-2.12□□□□□ -2.75
DENND4A-205ENST00000562540 CD163L1Q9NR16 1453 aa-2.12□□□□□ -2.75
DENND4A-205ENST00000562540 S100A13Q99584 98 aa-2.12□□□□□ -2.75
DENND4A-205ENST00000562540 INO80Q9ULG1 1556 aaPredicted RBP-2.13□□□□□ -2.75
DENND4A-205ENST00000562540 C6orf48Q9UBA6 75 aa-2.13□□□□□ -2.75
DENND4A-205ENST00000562540 DNAH12Q6ZR08 3092 aa-2.13□□□□□ -2.75
DENND4A-205ENST00000562540 ASXL1Q8IXJ9 1541 aa-2.13□□□□□ -2.75
DENND4A-205ENST00000562540 CFAP47Q6ZTR5 3102 aa-2.15□□□□□ -2.75
DENND4A-205ENST00000562540 FCER1GP30273 86 aa-2.15□□□□□ -2.75
DENND4A-205ENST00000562540 MED14O60244 1454 aa-2.15□□□□□ -2.75
DENND4A-205ENST00000562540 SFTA3P0C7M3 94 aa-2.16□□□□□ -2.76
DENND4A-205ENST00000562540 KIF21BO75037 1637 aa-2.17□□□□□ -2.76
DENND4A-205ENST00000562540 CROCC2H7BZ55 1655 aa-2.18□□□□□ -2.76
DENND4A-205ENST00000562540 NCBP2-AS2Q69YL0 99 aa-2.18□□□□□ -2.76
DENND4A-205ENST00000562540 ABCC1P33527 1531 aa-2.18□□□□□ -2.76
DENND4A-205ENST00000562540 CDH23Q9H251 3354 aa-2.19□□□□□ -2.76
DENND4A-205ENST00000562540 PREX2Q70Z35 1606 aa-2.2□□□□□ -2.76
DENND4A-205ENST00000562540 H3BVH4 76 aa-2.21□□□□□ -2.76
DENND4A-205ENST00000562540 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.22□□□□□ -2.76
DENND4A-205ENST00000562540 NHSQ6T4R5 1651 aa-2.22□□□□□ -2.77
DENND4A-205ENST00000562540 LMTK2Q8IWU2 1503 aa-2.22□□□□□ -2.77
DENND4A-205ENST00000562540 EEA1Q15075 1411 aa-2.24□□□□□ -2.77
DENND4A-205ENST00000562540 MYO5CQ9NQX4 1742 aa-2.24□□□□□ -2.77
DENND4A-205ENST00000562540 C18orf32Q8TCD1 76 aa-2.24□□□□□ -2.77
DENND4A-205ENST00000562540 DCAF1Q9Y4B6 1507 aa-2.25□□□□□ -2.77
DENND4A-205ENST00000562540 GNG2P59768 71 aa-2.26□□□□□ -2.77
DENND4A-205ENST00000562540 DEFB114Q30KQ6 69 aa-2.26□□□□□ -2.77
DENND4A-205ENST00000562540 CENPFP49454 3210 aa-2.26□□□□□ -2.77
DENND4A-205ENST00000562540 BRCA2P51587 3418 aa-2.26□□□□□ -2.77
DENND4A-205ENST00000562540 FAM208AQ9UK61 1670 aaKnown RBP-2.28□□□□□ -2.77
DENND4A-205ENST00000562540 ANKARQ7Z5J8 1434 aa-2.28□□□□□ -2.77
DENND4A-205ENST00000562540 ABCC6O95255 1503 aa-2.28□□□□□ -2.77
DENND4A-205ENST00000562540 CLASP1Q7Z460 1538 aa-2.3□□□□□ -2.78
DENND4A-205ENST00000562540 ABRACLQ9P1F3 81 aa-2.3□□□□□ -2.78
DENND4A-205ENST00000562540 CFAP74Q9C0B2 1584 aa-2.31□□□□□ -2.78
DENND4A-205ENST00000562540 ASPMQ8IZT6 3477 aa-2.32□□□□□ -2.78
DENND4A-205ENST00000562540 TTTY10Q9BZA0 68 aa-2.33□□□□□ -2.78
DENND4A-205ENST00000562540 DIP2AQ14689 1571 aa-2.34□□□□□ -2.78
DENND4A-205ENST00000562540 ATXN8Q156A1 80 aa-2.35□□□□□ -2.79
DENND4A-205ENST00000562540 KAAG1Q9UBP8 84 aa-2.36□□□□□ -2.79
DENND4A-205ENST00000562540 C3P01024 1663 aa-2.37□□□□□ -2.79
DENND4A-205ENST00000562540 MROH1Q8NDA8 1641 aa-2.37□□□□□ -2.79
DENND4A-205ENST00000562540 UTRNP46939 3433 aa-2.37□□□□□ -2.79
DENND4A-205ENST00000562540 CCDC18Q5T9S5 1454 aa-2.39□□□□□ -2.79
DENND4A-205ENST00000562540 POLR2KP53803 58 aaKnown RBP-2.39□□□□□ -2.79
DENND4A-205ENST00000562540 RRBP1Q9P2E9 1410 aaKnown RBP-2.4□□□□□ -2.79
DENND4A-205ENST00000562540 SMIM27A0A1W2PRY6 76 aa-2.4□□□□□ -2.79
DENND4A-205ENST00000562540 KRTAP19-2Q3LHN2 52 aa-2.41□□□□□ -2.8
DENND4A-205ENST00000562540 GLI2P10070 1586 aa-2.41□□□□□ -2.8
DENND4A-205ENST00000562540 VPS13AQ96RL7 3174 aa-2.42□□□□□ -2.8
DENND4A-205ENST00000562540 TIAM1Q13009 1591 aa-2.44□□□□□ -2.8
DENND4A-205ENST00000562540 GNG13Q9P2W3 67 aa-2.44□□□□□ -2.8
DENND4A-205ENST00000562540 RB1CC1Q8TDY2 1594 aa-2.44□□□□□ -2.8
DENND4A-205ENST00000562540 MADDQ8WXG6 1647 aa-2.45□□□□□ -2.8
DENND4A-205ENST00000562540 HILPDAQ9Y5L2 63 aa-2.45□□□□□ -2.8
DENND4A-205ENST00000562540 K7EMI3 77 aa-2.46□□□□□ -2.8
DENND4A-205ENST00000562540 ABCA8O94911 1581 aa-2.46□□□□□ -2.8
DENND4A-205ENST00000562540 NRXN3Q9Y4C0 1643 aa-2.46□□□□□ -2.8
DENND4A-205ENST00000562540 DEFB131AP59861 70 aa-2.47□□□□□ -2.8
DENND4A-205ENST00000562540 WFDC10BQ8IUB3 73 aa-2.47□□□□□ -2.8
DENND4A-205ENST00000562540 CCDC180Q9P1Z9 1646 aa-2.5□□□□□ -2.81
DENND4A-205ENST00000562540 XIRP2A4UGR9 3374 aa-2.5□□□□□ -2.81
DENND4A-205ENST00000562540 TMEM167BQ9NRX6 74 aa-2.5□□□□□ -2.81
DENND4A-205ENST00000562540 GOLGB1Q14789 3259 aaKnown RBP-2.5□□□□□ -2.81
DENND4A-205ENST00000562540 MROH2AA6NES4 1674 aa-2.5□□□□□ -2.81
DENND4A-205ENST00000562540 NMES1Q9C002 83 aa-2.52□□□□□ -2.81
DENND4A-205ENST00000562540 LMO7Q8WWI1 1683 aa-2.53□□□□□ -2.82
DENND4A-205ENST00000562540 ALS2Q96Q42 1657 aa-2.53□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms