RNA–Protein interactions for RNA: ENST00000560869.5

TNFAIP2-209, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP2, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-209ENST00000560869 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
TNFAIP2-209ENST00000560869 DNAH11Q96DT5 4516 aa9.2□□□□□ -0.94
TNFAIP2-209ENST00000560869 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
TNFAIP2-209ENST00000560869 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
TNFAIP2-209ENST00000560869 ANK2Q01484 3957 aa8.99□□□□□ -0.97
TNFAIP2-209ENST00000560869 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
TNFAIP2-209ENST00000560869 STARD9Q9P2P6 4700 aa8.97□□□□□ -0.97
TNFAIP2-209ENST00000560869 FAT1Q14517 4588 aa8.95□□□□□ -0.98
TNFAIP2-209ENST00000560869 DNAH8Q96JB1 4490 aa8.94□□□□□ -0.98
TNFAIP2-209ENST00000560869 VPS13DQ5THJ4 4388 aa8.88□□□□□ -0.99
TNFAIP2-209ENST00000560869 RYR1P21817 5038 aa8.84□□□□□ -0.99
TNFAIP2-209ENST00000560869 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
TNFAIP2-209ENST00000560869 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
TNFAIP2-209ENST00000560869 LYSTQ99698 3801 aa8.81□□□□□ -1
TNFAIP2-209ENST00000560869 PRKDCP78527 4128 aaKnown RBP8.81□□□□□ -1
TNFAIP2-209ENST00000560869 KMT2AQ03164 3969 aa8.78□□□□□ -1
TNFAIP2-209ENST00000560869 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
TNFAIP2-209ENST00000560869 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
TNFAIP2-209ENST00000560869 DNAH2Q9P225 4427 aa8.73□□□□□ -1.01
TNFAIP2-209ENST00000560869 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
TNFAIP2-209ENST00000560869 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
TNFAIP2-209ENST00000560869 LCE3AQ5TA76 89 aa8.66□□□□□ -1.02
TNFAIP2-209ENST00000560869 CMYA5Q8N3K9 4069 aa8.65□□□□□ -1.03
TNFAIP2-209ENST00000560869 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
TNFAIP2-209ENST00000560869 KRTAP12-3P60328 96 aa8.63□□□□□ -1.03
TNFAIP2-209ENST00000560869 FRAS1Q86XX4 4008 aa8.59□□□□□ -1.04
TNFAIP2-209ENST00000560869 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
TNFAIP2-209ENST00000560869 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
TNFAIP2-209ENST00000560869 INE1O15225 51 aa8.54□□□□□ -1.04
TNFAIP2-209ENST00000560869 RYR3Q15413 4870 aa8.52□□□□□ -1.05
TNFAIP2-209ENST00000560869 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
TNFAIP2-209ENST00000560869 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
TNFAIP2-209ENST00000560869 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
TNFAIP2-209ENST00000560869 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.06
TNFAIP2-209ENST00000560869 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
TNFAIP2-209ENST00000560869 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
TNFAIP2-209ENST00000560869 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
TNFAIP2-209ENST00000560869 HECTD4Q9Y4D8 3996 aa8.4□□□□□ -1.06
TNFAIP2-209ENST00000560869 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
TNFAIP2-209ENST00000560869 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
TNFAIP2-209ENST00000560869 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
TNFAIP2-209ENST00000560869 MT1HP80294 61 aa8.26□□□□□ -1.09
TNFAIP2-209ENST00000560869 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
TNFAIP2-209ENST00000560869 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.1
TNFAIP2-209ENST00000560869 HERC2O95714 4834 aa8.18□□□□□ -1.1
TNFAIP2-209ENST00000560869 RYR2Q92736 4967 aa8.14□□□□□ -1.11
TNFAIP2-209ENST00000560869 MT2AP02795 61 aa8.11□□□□□ -1.11
TNFAIP2-209ENST00000560869 PKHD1P08F94 4074 aa8.06□□□□□ -1.12
TNFAIP2-209ENST00000560869 BIRC6Q9NR09 4857 aa8.04□□□□□ -1.12
TNFAIP2-209ENST00000560869 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
TNFAIP2-209ENST00000560869 LRP2P98164 4655 aa7.98□□□□□ -1.13
TNFAIP2-209ENST00000560869 MT1FP04733 61 aa7.97□□□□□ -1.13
TNFAIP2-209ENST00000560869 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
TNFAIP2-209ENST00000560869 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
TNFAIP2-209ENST00000560869 KMT2CQ8NEZ4 4911 aaKnown RBP7.84□□□□□ -1.15
TNFAIP2-209ENST00000560869 PCLOQ9Y6V0 5065 aa7.82□□□□□ -1.16
TNFAIP2-209ENST00000560869 PKD1P98161 4303 aa7.8□□□□□ -1.16
TNFAIP2-209ENST00000560869 KRTAP19-5Q3LI72 72 aa7.74□□□□□ -1.17
TNFAIP2-209ENST00000560869 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
TNFAIP2-209ENST00000560869 HSPG2P98160 4391 aa7.69□□□□□ -1.18
TNFAIP2-209ENST00000560869 HERC1Q15751 4861 aa7.63□□□□□ -1.19
TNFAIP2-209ENST00000560869 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.19
TNFAIP2-209ENST00000560869 KRTAP10-7P60409 375 aaPredicted RBP7.59□□□□□ -1.19
TNFAIP2-209ENST00000560869 LPAP08519 4548 aa7.54□□□□□ -1.2
TNFAIP2-209ENST00000560869 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.2
TNFAIP2-209ENST00000560869 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
TNFAIP2-209ENST00000560869 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
TNFAIP2-209ENST00000560869 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
TNFAIP2-209ENST00000560869 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
TNFAIP2-209ENST00000560869 KRTAP9-8Q9BYQ0 159 aa7.42□□□□□ -1.22
TNFAIP2-209ENST00000560869 MT1XP80297 61 aa7.42□□□□□ -1.22
TNFAIP2-209ENST00000560869 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
TNFAIP2-209ENST00000560869 TNXBP22105 4242 aa7.36□□□□□ -1.23
TNFAIP2-209ENST00000560869 MT1BP07438 61 aa7.35□□□□□ -1.23
TNFAIP2-209ENST00000560869 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
TNFAIP2-209ENST00000560869 SPRR5A0A1B0GTR4 108 aa7.3□□□□□ -1.24
TNFAIP2-209ENST00000560869 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
TNFAIP2-209ENST00000560869 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
TNFAIP2-209ENST00000560869 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
TNFAIP2-209ENST00000560869 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
TNFAIP2-209ENST00000560869 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
TNFAIP2-209ENST00000560869 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
TNFAIP2-209ENST00000560869 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
TNFAIP2-209ENST00000560869 MT1GP13640 62 aa7.04□□□□□ -1.28
TNFAIP2-209ENST00000560869 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
TNFAIP2-209ENST00000560869 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
TNFAIP2-209ENST00000560869 SPRR2EP22531 72 aa7.01□□□□□ -1.29
TNFAIP2-209ENST00000560869 SPRR2BP35325 72 aa7.01□□□□□ -1.29
TNFAIP2-209ENST00000560869 SPRR2AP35326 72 aa7.01□□□□□ -1.29
TNFAIP2-209ENST00000560869 LCE2BO14633 110 aa7□□□□□ -1.29
TNFAIP2-209ENST00000560869 KRTAP12-4P60329 112 aa7□□□□□ -1.29
TNFAIP2-209ENST00000560869 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
TNFAIP2-209ENST00000560869 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
TNFAIP2-209ENST00000560869 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
TNFAIP2-209ENST00000560869 MUC2Q02817 5179 aa6.92□□□□□ -1.3
TNFAIP2-209ENST00000560869 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
TNFAIP2-209ENST00000560869 OBSCNQ5VST9 7968 aa6.82□□□□□ -1.32
TNFAIP2-209ENST00000560869 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
TNFAIP2-209ENST00000560869 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
TNFAIP2-209ENST00000560869 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms