RNA–Protein interactions for RNA: ENST00000560789.5

PDE8A-213, Transcript of phosphodiesterase 8A, humanhuman

TSL 2

Gene PDE8A, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-213ENST00000560789 SRRM2Q9UQ35 2752 aaKnown RBP2.57□□□□□ -2
PDE8A-213ENST00000560789 KRTAP10-12P60413 245 aa2.57□□□□□ -2
PDE8A-213ENST00000560789 DMDP11532 3685 aa2.56□□□□□ -2
PDE8A-213ENST00000560789 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
PDE8A-213ENST00000560789 ASPMQ8IZT6 3477 aa2.54□□□□□ -2
PDE8A-213ENST00000560789 NBPF19A0A087WUL8 3843 aa2.53□□□□□ -2
PDE8A-213ENST00000560789 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
PDE8A-213ENST00000560789 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
PDE8A-213ENST00000560789 LAMA5O15230 3695 aa2.52□□□□□ -2.01
PDE8A-213ENST00000560789 ZFHX4Q86UP3 3567 aa2.51□□□□□ -2.01
PDE8A-213ENST00000560789 CSMD1Q96PZ7 3565 aa2.49□□□□□ -2.01
PDE8A-213ENST00000560789 DNAH2Q9P225 4427 aa2.49□□□□□ -2.01
PDE8A-213ENST00000560789 SMG1Q96Q15 3661 aaKnown RBP2.49□□□□□ -2.01
PDE8A-213ENST00000560789 TRRAPQ9Y4A5 3859 aa2.49□□□□□ -2.01
PDE8A-213ENST00000560789 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
PDE8A-213ENST00000560789 DNAH10Q8IVF4 4471 aa2.48□□□□□ -2.01
PDE8A-213ENST00000560789 CUBNO60494 3623 aa2.47□□□□□ -2.01
PDE8A-213ENST00000560789 PRKDCP78527 4128 aaKnown RBP2.47□□□□□ -2.01
PDE8A-213ENST00000560789 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
PDE8A-213ENST00000560789 KRTAP4-5Q9BYR2 181 aa2.47□□□□□ -2.01
PDE8A-213ENST00000560789 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
PDE8A-213ENST00000560789 DNAH11Q96DT5 4516 aa2.44□□□□□ -2.02
PDE8A-213ENST00000560789 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
PDE8A-213ENST00000560789 DNAH17Q9UFH2 4485 aa2.43□□□□□ -2.02
PDE8A-213ENST00000560789 DNAH5Q8TE73 4624 aa2.42□□□□□ -2.02
PDE8A-213ENST00000560789 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
PDE8A-213ENST00000560789 SPENQ96T58 3664 aaKnown RBP2.41□□□□□ -2.02
PDE8A-213ENST00000560789 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
PDE8A-213ENST00000560789 ZNF469Q96JG9 3925 aaPredicted RBP2.4□□□□□ -2.02
PDE8A-213ENST00000560789 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.02
PDE8A-213ENST00000560789 DNAH1Q9P2D7 4330 aa2.4□□□□□ -2.03
PDE8A-213ENST00000560789 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
PDE8A-213ENST00000560789 KRTAP9-8Q9BYQ0 159 aa2.38□□□□□ -2.03
PDE8A-213ENST00000560789 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
PDE8A-213ENST00000560789 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
PDE8A-213ENST00000560789 PLECQ15149 4684 aaKnown RBP2.36□□□□□ -2.03
PDE8A-213ENST00000560789 CSMD2Q7Z408 3487 aa2.35□□□□□ -2.03
PDE8A-213ENST00000560789 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
PDE8A-213ENST00000560789 MT1HP80294 61 aa2.34□□□□□ -2.04
PDE8A-213ENST00000560789 DYNC1H1Q14204 4646 aaKnown RBP2.33□□□□□ -2.04
PDE8A-213ENST00000560789 MT2AP02795 61 aa2.33□□□□□ -2.04
PDE8A-213ENST00000560789 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
PDE8A-213ENST00000560789 SACSQ9NZJ4 4579 aa2.33□□□□□ -2.04
PDE8A-213ENST00000560789 DYNC2H1Q8NCM8 4307 aaKnown RBP2.32□□□□□ -2.04
PDE8A-213ENST00000560789 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
PDE8A-213ENST00000560789 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
PDE8A-213ENST00000560789 VPS13CQ709C8 3753 aa2.31□□□□□ -2.04
PDE8A-213ENST00000560789 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
PDE8A-213ENST00000560789 DNAH8Q96JB1 4490 aa2.27□□□□□ -2.05
PDE8A-213ENST00000560789 LRP1BQ9NZR2 4599 aa2.27□□□□□ -2.05
PDE8A-213ENST00000560789 MT1FP04733 61 aa2.26□□□□□ -2.05
PDE8A-213ENST00000560789 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
PDE8A-213ENST00000560789 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
PDE8A-213ENST00000560789 LCE3CQ5T5A8 94 aa2.24□□□□□ -2.05
PDE8A-213ENST00000560789 FAT1Q14517 4588 aa2.24□□□□□ -2.05
PDE8A-213ENST00000560789 STARD9Q9P2P6 4700 aa2.23□□□□□ -2.05
PDE8A-213ENST00000560789 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
PDE8A-213ENST00000560789 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
PDE8A-213ENST00000560789 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
PDE8A-213ENST00000560789 ANK2Q01484 3957 aa2.21□□□□□ -2.06
PDE8A-213ENST00000560789 LCE1DQ5T752 114 aa2.21□□□□□ -2.06
PDE8A-213ENST00000560789 HSPG2P98160 4391 aa2.2□□□□□ -2.06
PDE8A-213ENST00000560789 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
PDE8A-213ENST00000560789 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
PDE8A-213ENST00000560789 HERC1Q15751 4861 aa2.19□□□□□ -2.06
PDE8A-213ENST00000560789 RYR1P21817 5038 aa2.17□□□□□ -2.06
PDE8A-213ENST00000560789 RYR2Q92736 4967 aa2.17□□□□□ -2.06
PDE8A-213ENST00000560789 CMYA5Q8N3K9 4069 aa2.17□□□□□ -2.06
PDE8A-213ENST00000560789 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
PDE8A-213ENST00000560789 LRP1Q07954 4544 aaKnown RBP2.16□□□□□ -2.06
PDE8A-213ENST00000560789 CSMD3Q7Z407 3707 aa2.15□□□□□ -2.07
PDE8A-213ENST00000560789 MT1XP80297 61 aa2.14□□□□□ -2.07
PDE8A-213ENST00000560789 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
PDE8A-213ENST00000560789 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
PDE8A-213ENST00000560789 MT1BP07438 61 aa2.12□□□□□ -2.07
PDE8A-213ENST00000560789 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
PDE8A-213ENST00000560789 FAT3Q8TDW7 4589 aa2.12□□□□□ -2.07
PDE8A-213ENST00000560789 KMT2AQ03164 3969 aa2.12□□□□□ -2.07
PDE8A-213ENST00000560789 RYR3Q15413 4870 aa2.12□□□□□ -2.07
PDE8A-213ENST00000560789 VPS13BQ7Z7G8 4022 aa2.11□□□□□ -2.07
PDE8A-213ENST00000560789 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.07
PDE8A-213ENST00000560789 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
PDE8A-213ENST00000560789 TNXBP22105 4242 aa2.06□□□□□ -2.08
PDE8A-213ENST00000560789 KRTAP9-3Q9BYQ3 159 aa2.06□□□□□ -2.08
PDE8A-213ENST00000560789 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
PDE8A-213ENST00000560789 KRTAP19-2Q3LHN2 52 aa2.04□□□□□ -2.08
PDE8A-213ENST00000560789 MT1GP13640 62 aa2.04□□□□□ -2.08
PDE8A-213ENST00000560789 FRAS1Q86XX4 4008 aa2.03□□□□□ -2.08
PDE8A-213ENST00000560789 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.09
PDE8A-213ENST00000560789 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
PDE8A-213ENST00000560789 PKD1P98161 4303 aa2□□□□□ -2.09
PDE8A-213ENST00000560789 PKHD1L1Q86WI1 4243 aa2□□□□□ -2.09
PDE8A-213ENST00000560789 LYSTQ99698 3801 aa2□□□□□ -2.09
PDE8A-213ENST00000560789 HERC2O95714 4834 aa1.98□□□□□ -2.09
PDE8A-213ENST00000560789 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PDE8A-213ENST00000560789 MT1LQ93083 61 aa1.98□□□□□ -2.09
PDE8A-213ENST00000560789 PCLOQ9Y6V0 5065 aa1.95□□□□□ -2.1
PDE8A-213ENST00000560789 MUC17Q685J3 4493 aa1.94□□□□□ -2.1
PDE8A-213ENST00000560789 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
PDE8A-213ENST00000560789 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms