RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
TPM1-224ENST00000560615 NDUFC1O43677 76 aa8.07□□□□□ -1.12
TPM1-224ENST00000560615 F8W1H4 67 aa8.06□□□□□ -1.12
TPM1-224ENST00000560615 H0YAA0 97 aa8.02□□□□□ -1.13
TPM1-224ENST00000560615 A0A087WVE0 104 aa8.01□□□□□ -1.13
TPM1-224ENST00000560615 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
TPM1-224ENST00000560615 ATOX1O00244 68 aa8□□□□□ -1.13
TPM1-224ENST00000560615 UQCRQO14949 82 aa7.97□□□□□ -1.13
TPM1-224ENST00000560615 ACYP1P07311 99 aa7.97□□□□□ -1.13
TPM1-224ENST00000560615 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
TPM1-224ENST00000560615 A8MUN3 132 aa7.94□□□□□ -1.14
TPM1-224ENST00000560615 H0Y9P7 68 aa7.93□□□□□ -1.14
TPM1-224ENST00000560615 ATP5EP2Q5VTU8 51 aa7.93□□□□□ -1.14
TPM1-224ENST00000560615 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
TPM1-224ENST00000560615 KMT2DO14686 5537 aa7.9□□□□□ -1.14
TPM1-224ENST00000560615 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
TPM1-224ENST00000560615 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
TPM1-224ENST00000560615 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
TPM1-224ENST00000560615 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
TPM1-224ENST00000560615 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
TPM1-224ENST00000560615 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
TPM1-224ENST00000560615 SPRR2FQ96RM1 72 aa7.82□□□□□ -1.16
TPM1-224ENST00000560615 C20orf197Q8N268 126 aa7.8□□□□□ -1.16
TPM1-224ENST00000560615 R4GN34 69 aa7.79□□□□□ -1.16
TPM1-224ENST00000560615 SPRR2EP22531 72 aa7.78□□□□□ -1.16
TPM1-224ENST00000560615 SPRR2BP35325 72 aa7.78□□□□□ -1.16
TPM1-224ENST00000560615 SPRR2AP35326 72 aa7.78□□□□□ -1.16
TPM1-224ENST00000560615 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
TPM1-224ENST00000560615 MP68P56378 58 aa7.77□□□□□ -1.17
TPM1-224ENST00000560615 MT1XP80297 61 aa7.75□□□□□ -1.17
TPM1-224ENST00000560615 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
TPM1-224ENST00000560615 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
TPM1-224ENST00000560615 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
TPM1-224ENST00000560615 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
TPM1-224ENST00000560615 M0QZ58 72 aa7.67□□□□□ -1.18
TPM1-224ENST00000560615 H3BPC8 53 aa7.62□□□□□ -1.19
TPM1-224ENST00000560615 P0C880 135 aa7.62□□□□□ -1.19
TPM1-224ENST00000560615 OCR1Q9BZK8 76 aa7.62□□□□□ -1.19
TPM1-224ENST00000560615 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
TPM1-224ENST00000560615 KRTAP2-2Q9BYT5 123 aa7.59□□□□□ -1.19
TPM1-224ENST00000560615 KRTAP2-1Q9BYU5 128 aa7.59□□□□□ -1.19
TPM1-224ENST00000560615 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
TPM1-224ENST00000560615 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
TPM1-224ENST00000560615 SPRR2DP22532 72 aa7.54□□□□□ -1.2
TPM1-224ENST00000560615 SCGB1A1P11684 91 aa7.49□□□□□ -1.21
TPM1-224ENST00000560615 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
TPM1-224ENST00000560615 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
TPM1-224ENST00000560615 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
TPM1-224ENST00000560615 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
TPM1-224ENST00000560615 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
TPM1-224ENST00000560615 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
TPM1-224ENST00000560615 ACYP2P14621 99 aa7.41□□□□□ -1.22
TPM1-224ENST00000560615 J3QR89 54 aa7.39□□□□□ -1.23
TPM1-224ENST00000560615 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
TPM1-224ENST00000560615 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
TPM1-224ENST00000560615 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
TPM1-224ENST00000560615 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
TPM1-224ENST00000560615 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
TPM1-224ENST00000560615 A0A1B0GV90 55 aa7.22□□□□□ -1.25
TPM1-224ENST00000560615 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
TPM1-224ENST00000560615 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
TPM1-224ENST00000560615 SNURFQ9Y675 71 aa7□□□□□ -1.29
TPM1-224ENST00000560615 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
TPM1-224ENST00000560615 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
TPM1-224ENST00000560615 K7ERU9 68 aa6.93□□□□□ -1.3
TPM1-224ENST00000560615 SEC61GP60059 68 aa6.93□□□□□ -1.3
TPM1-224ENST00000560615 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
TPM1-224ENST00000560615 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
TPM1-224ENST00000560615 MT1EP04732 61 aa6.9□□□□□ -1.3
TPM1-224ENST00000560615 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.3
TPM1-224ENST00000560615 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.31
TPM1-224ENST00000560615 A0A0D9SG42 100 aa6.84□□□□□ -1.31
TPM1-224ENST00000560615 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
TPM1-224ENST00000560615 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
TPM1-224ENST00000560615 GPR98Q8WXG9 6306 aa6.82□□□□□ -1.32
TPM1-224ENST00000560615 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
TPM1-224ENST00000560615 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
TPM1-224ENST00000560615 COA5Q86WW8 74 aa6.8□□□□□ -1.32
TPM1-224ENST00000560615 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
TPM1-224ENST00000560615 MT1GP13640 62 aa6.77□□□□□ -1.33
TPM1-224ENST00000560615 A0A1B0GU33 70 aa6.74□□□□□ -1.33
TPM1-224ENST00000560615 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
TPM1-224ENST00000560615 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
TPM1-224ENST00000560615 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
TPM1-224ENST00000560615 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
TPM1-224ENST00000560615 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
TPM1-224ENST00000560615 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
TPM1-224ENST00000560615 MT1MQ8N339 61 aa6.58□□□□□ -1.36
TPM1-224ENST00000560615 MT4P47944 62 aa6.57□□□□□ -1.36
TPM1-224ENST00000560615 MT1LQ93083 61 aa6.55□□□□□ -1.36
TPM1-224ENST00000560615 A0A1B0GU69 56 aa6.53□□□□□ -1.36
TPM1-224ENST00000560615 TNP1P09430 55 aa6.52□□□□□ -1.37
TPM1-224ENST00000560615 COX7CP15954 63 aa6.52□□□□□ -1.37
TPM1-224ENST00000560615 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
TPM1-224ENST00000560615 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
TPM1-224ENST00000560615 H7BZZ5 65 aa6.44□□□□□ -1.38
TPM1-224ENST00000560615 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
TPM1-224ENST00000560615 A8MU10 97 aa6.41□□□□□ -1.38
TPM1-224ENST00000560615 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
TPM1-224ENST00000560615 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms