RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 Q6ZSA8 131 aa2.5□□□□□ -2.01
TMOD3-207ENST00000560549 LINC00472Q9H8W2 130 aa2.5□□□□□ -2.01
TMOD3-207ENST00000560549 MOBPQ13875 183 aa2.49□□□□□ -2.01
TMOD3-207ENST00000560549 PRR15Q8IV56 129 aa2.49□□□□□ -2.01
TMOD3-207ENST00000560549 C20orf197Q8N268 126 aa2.49□□□□□ -2.01
TMOD3-207ENST00000560549 Q96NJ1 140 aa2.49□□□□□ -2.01
TMOD3-207ENST00000560549 PKD1P98161 4303 aa2.48□□□□□ -2.01
TMOD3-207ENST00000560549 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
TMOD3-207ENST00000560549 SNURFQ9Y675 71 aa2.48□□□□□ -2.01
TMOD3-207ENST00000560549 DNAH5Q8TE73 4624 aa2.47□□□□□ -2.01
TMOD3-207ENST00000560549 FLG2Q5D862 2391 aaPredicted RBP2.47□□□□□ -2.01
TMOD3-207ENST00000560549 Q5XG85 94 aa2.47□□□□□ -2.01
TMOD3-207ENST00000560549 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
TMOD3-207ENST00000560549 HCG22E2RYF7 251 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 H7BZZ5 65 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 ATP5EP56381 51 aaPredicted RBP2.46□□□□□ -2.02
TMOD3-207ENST00000560549 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 WFDC13Q8IUB5 93 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
TMOD3-207ENST00000560549 NDUFC1O43677 76 aa2.45□□□□□ -2.02
TMOD3-207ENST00000560549 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
TMOD3-207ENST00000560549 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
TMOD3-207ENST00000560549 MMP24-AS1A0A0U1RRL7 71 aa2.45□□□□□ -2.02
TMOD3-207ENST00000560549 TMEM254Q8TBM7 123 aa2.45□□□□□ -2.02
TMOD3-207ENST00000560549 ASB16-AS1Q495Z4 193 aa2.44□□□□□ -2.02
TMOD3-207ENST00000560549 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
TMOD3-207ENST00000560549 ZCCHC13Q8WW36 166 aaKnown RBP2.44□□□□□ -2.02
TMOD3-207ENST00000560549 FAT1Q14517 4588 aa2.43□□□□□ -2.02
TMOD3-207ENST00000560549 SMR3BP02814 79 aaPredicted RBP2.42□□□□□ -2.02
TMOD3-207ENST00000560549 KRTAP10-4P60372 401 aaPredicted RBP2.42□□□□□ -2.02
TMOD3-207ENST00000560549 FAM229BQ4G0N7 80 aa2.42□□□□□ -2.02
TMOD3-207ENST00000560549 SSBP3-AS1Q7Z2R9 100 aa2.42□□□□□ -2.02
TMOD3-207ENST00000560549 hDV103S1A0JD37 113 aa2.41□□□□□ -2.02
TMOD3-207ENST00000560549 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
TMOD3-207ENST00000560549 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
TMOD3-207ENST00000560549 Q5VSD8 79 aa2.41□□□□□ -2.02
TMOD3-207ENST00000560549 LRP2P98164 4655 aa2.41□□□□□ -2.02
TMOD3-207ENST00000560549 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.02
TMOD3-207ENST00000560549 A0A1B0GU33 70 aa2.39□□□□□ -2.03
TMOD3-207ENST00000560549 H0Y9P7 68 aa2.39□□□□□ -2.03
TMOD3-207ENST00000560549 NDUFB1O75438 58 aa2.39□□□□□ -2.03
TMOD3-207ENST00000560549 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
TMOD3-207ENST00000560549 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
TMOD3-207ENST00000560549 TRAV22A0A0B4J277 110 aa2.38□□□□□ -2.03
TMOD3-207ENST00000560549 MRPL34Q9BQ48 92 aaKnown RBP2.38□□□□□ -2.03
TMOD3-207ENST00000560549 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
TMOD3-207ENST00000560549 H3BPC8 53 aa2.37□□□□□ -2.03
TMOD3-207ENST00000560549 FP248Q71RG6 208 aaPredicted RBP2.37□□□□□ -2.03
TMOD3-207ENST00000560549 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
TMOD3-207ENST00000560549 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
TMOD3-207ENST00000560549 RETNLBQ9BQ08 111 aa2.35□□□□□ -2.03
TMOD3-207ENST00000560549 CYP4F30PQ9H0H9 118 aa2.35□□□□□ -2.03
TMOD3-207ENST00000560549 Q1T7F1 81 aa2.34□□□□□ -2.03
TMOD3-207ENST00000560549 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
TMOD3-207ENST00000560549 TP53AIP1Q9HCN2 124 aa2.34□□□□□ -2.03
TMOD3-207ENST00000560549 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.04
TMOD3-207ENST00000560549 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 BRK1Q8WUW1 75 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
TMOD3-207ENST00000560549 SPINK1P00995 79 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 CRCT1Q9UGL9 99 aa2.33□□□□□ -2.04
TMOD3-207ENST00000560549 C7orf65Q6ZTY9 151 aa2.32□□□□□ -2.04
TMOD3-207ENST00000560549 RPS29P62273 56 aaKnown RBP2.31□□□□□ -2.04
TMOD3-207ENST00000560549 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
TMOD3-207ENST00000560549 LOC101927531A0A1B0GV80 90 aa2.3□□□□□ -2.04
TMOD3-207ENST00000560549 R4GN34 69 aa2.3□□□□□ -2.04
TMOD3-207ENST00000560549 C9orf92A6NGG3 77 aa2.29□□□□□ -2.04
TMOD3-207ENST00000560549 HRES1P13985 223 aa2.29□□□□□ -2.04
TMOD3-207ENST00000560549 COA5Q86WW8 74 aa2.29□□□□□ -2.04
TMOD3-207ENST00000560549 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
TMOD3-207ENST00000560549 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
TMOD3-207ENST00000560549 TNXBP22105 4242 aa2.26□□□□□ -2.05
TMOD3-207ENST00000560549 ATP11AUNQ6ZP68 121 aa2.26□□□□□ -2.05
TMOD3-207ENST00000560549 C20orf166-AS1Q96NR2 134 aa2.26□□□□□ -2.05
TMOD3-207ENST00000560549 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
TMOD3-207ENST00000560549 ROMO1P60602 79 aa2.24□□□□□ -2.05
TMOD3-207ENST00000560549 Q5VV11 94 aa2.24□□□□□ -2.05
TMOD3-207ENST00000560549 ACYP2P14621 99 aa2.22□□□□□ -2.05
TMOD3-207ENST00000560549 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
TMOD3-207ENST00000560549 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
TMOD3-207ENST00000560549 SPINK7P58062 85 aa2.2□□□□□ -2.06
TMOD3-207ENST00000560549 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
TMOD3-207ENST00000560549 A6NN06 94 aa2.2□□□□□ -2.06
TMOD3-207ENST00000560549 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
TMOD3-207ENST00000560549 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
TMOD3-207ENST00000560549 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
TMOD3-207ENST00000560549 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
TMOD3-207ENST00000560549 RPL37P61927 97 aaKnown RBP2.19□□□□□ -2.06
TMOD3-207ENST00000560549 LPAP08519 4548 aa2.17□□□□□ -2.06
TMOD3-207ENST00000560549 COX6B2Q6YFQ2 88 aa2.15□□□□□ -2.06
TMOD3-207ENST00000560549 P0C880 135 aa2.14□□□□□ -2.07
TMOD3-207ENST00000560549 TPRXLQ17RH7 258 aa2.14□□□□□ -2.07
TMOD3-207ENST00000560549 A0A1B0GU69 56 aa2.13□□□□□ -2.07
TMOD3-207ENST00000560549 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
TMOD3-207ENST00000560549 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
TMOD3-207ENST00000560549 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms