RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 KRTAP10-2P60368 255 aa2.88□□□□□ -1.95
LRRC49-221ENST00000560107 SPINK1P00995 79 aa2.88□□□□□ -1.95
LRRC49-221ENST00000560107 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
LRRC49-221ENST00000560107 FAT2Q9NYQ8 4349 aa2.88□□□□□ -1.95
LRRC49-221ENST00000560107 Q8N1X5 172 aa2.86□□□□□ -1.95
LRRC49-221ENST00000560107 HYDINQ4G0P3 5121 aa2.86□□□□□ -1.95
LRRC49-221ENST00000560107 LY6G6CO95867 125 aa2.86□□□□□ -1.95
LRRC49-221ENST00000560107 KRTAP1-4P0C5Y4 121 aa2.85□□□□□ -1.95
LRRC49-221ENST00000560107 A8MUU9 505 aa2.84□□□□□ -1.95
LRRC49-221ENST00000560107 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
LRRC49-221ENST00000560107 Q6ZSA8 131 aa2.82□□□□□ -1.96
LRRC49-221ENST00000560107 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
LRRC49-221ENST00000560107 DNHD1Q96M86 4753 aa2.82□□□□□ -1.96
LRRC49-221ENST00000560107 SACSQ9NZJ4 4579 aa2.81□□□□□ -1.96
LRRC49-221ENST00000560107 H0YAA0 97 aa2.81□□□□□ -1.96
LRRC49-221ENST00000560107 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
LRRC49-221ENST00000560107 PKHD1P08F94 4074 aa2.78□□□□□ -1.96
LRRC49-221ENST00000560107 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
LRRC49-221ENST00000560107 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
LRRC49-221ENST00000560107 FAT1Q14517 4588 aa2.78□□□□□ -1.96
LRRC49-221ENST00000560107 A0A1B0GU33 70 aa2.77□□□□□ -1.97
LRRC49-221ENST00000560107 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
LRRC49-221ENST00000560107 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
LRRC49-221ENST00000560107 KRTAP15-1Q3LI76 137 aa2.77□□□□□ -1.97
LRRC49-221ENST00000560107 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
LRRC49-221ENST00000560107 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
LRRC49-221ENST00000560107 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
LRRC49-221ENST00000560107 RPS29P62273 56 aaKnown RBP2.74□□□□□ -1.97
LRRC49-221ENST00000560107 FLG2Q5D862 2391 aaPredicted RBP2.73□□□□□ -1.97
LRRC49-221ENST00000560107 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
LRRC49-221ENST00000560107 CRIPTQ9P021 101 aa2.73□□□□□ -1.97
LRRC49-221ENST00000560107 SMR3BP02814 79 aaPredicted RBP2.73□□□□□ -1.97
LRRC49-221ENST00000560107 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
LRRC49-221ENST00000560107 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
LRRC49-221ENST00000560107 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
LRRC49-221ENST00000560107 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
LRRC49-221ENST00000560107 HSPG2P98160 4391 aa2.69□□□□□ -1.98
LRRC49-221ENST00000560107 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
LRRC49-221ENST00000560107 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
LRRC49-221ENST00000560107 KRTAP10-4P60372 401 aaPredicted RBP2.66□□□□□ -1.98
LRRC49-221ENST00000560107 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
LRRC49-221ENST00000560107 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
LRRC49-221ENST00000560107 A0A0D9SG42 100 aa2.65□□□□□ -1.99
LRRC49-221ENST00000560107 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
LRRC49-221ENST00000560107 TNXBP22105 4242 aa2.64□□□□□ -1.99
LRRC49-221ENST00000560107 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
LRRC49-221ENST00000560107 DMBT1Q9UGM3 2413 aaPredicted RBP2.63□□□□□ -1.99
LRRC49-221ENST00000560107 KRTAP23-1A1A580 65 aa2.62□□□□□ -1.99
LRRC49-221ENST00000560107 TPRXLQ17RH7 258 aa2.62□□□□□ -1.99
LRRC49-221ENST00000560107 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
LRRC49-221ENST00000560107 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
LRRC49-221ENST00000560107 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
LRRC49-221ENST00000560107 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
LRRC49-221ENST00000560107 LPAP08519 4548 aa2.6□□□□□ -1.99
LRRC49-221ENST00000560107 S4R3F8 94 aa2.6□□□□□ -1.99
LRRC49-221ENST00000560107 RYR2Q92736 4967 aa2.59□□□□□ -1.99
LRRC49-221ENST00000560107 LCE4AQ5TA78 99 aa2.58□□□□□ -2
LRRC49-221ENST00000560107 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
LRRC49-221ENST00000560107 KRTAP12-2P59991 146 aa2.57□□□□□ -2
LRRC49-221ENST00000560107 KRTAP12-1P59990 96 aa2.54□□□□□ -2
LRRC49-221ENST00000560107 LRP2P98164 4655 aa2.53□□□□□ -2
LRRC49-221ENST00000560107 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
LRRC49-221ENST00000560107 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
LRRC49-221ENST00000560107 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
LRRC49-221ENST00000560107 R4GN34 69 aa2.51□□□□□ -2.01
LRRC49-221ENST00000560107 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
LRRC49-221ENST00000560107 RYR1P21817 5038 aa2.5□□□□□ -2.01
LRRC49-221ENST00000560107 Q5VSD8 79 aa2.5□□□□□ -2.01
LRRC49-221ENST00000560107 M0QZ58 72 aa2.48□□□□□ -2.01
LRRC49-221ENST00000560107 RYR3Q15413 4870 aa2.48□□□□□ -2.01
LRRC49-221ENST00000560107 KIAA1109Q2LD37 5005 aa2.47□□□□□ -2.01
LRRC49-221ENST00000560107 MT1HL1P0DM35 61 aa2.46□□□□□ -2.02
LRRC49-221ENST00000560107 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
LRRC49-221ENST00000560107 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
LRRC49-221ENST00000560107 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
LRRC49-221ENST00000560107 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
LRRC49-221ENST00000560107 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
LRRC49-221ENST00000560107 INE1O15225 51 aa2.32□□□□□ -2.04
LRRC49-221ENST00000560107 MUC2Q02817 5179 aa2.31□□□□□ -2.04
LRRC49-221ENST00000560107 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
LRRC49-221ENST00000560107 KRTAP19-2Q3LHN2 52 aa2.29□□□□□ -2.04
LRRC49-221ENST00000560107 HERC1Q15751 4861 aa2.27□□□□□ -2.05
LRRC49-221ENST00000560107 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
LRRC49-221ENST00000560107 HERC2O95714 4834 aa2.25□□□□□ -2.05
LRRC49-221ENST00000560107 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
LRRC49-221ENST00000560107 BIRC6Q9NR09 4857 aa2.23□□□□□ -2.05
LRRC49-221ENST00000560107 TNP1P09430 55 aa2.23□□□□□ -2.05
LRRC49-221ENST00000560107 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
LRRC49-221ENST00000560107 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
LRRC49-221ENST00000560107 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
LRRC49-221ENST00000560107 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
LRRC49-221ENST00000560107 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
LRRC49-221ENST00000560107 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
LRRC49-221ENST00000560107 UBR4Q5T4S7 5183 aa2.11□□□□□ -2.07
LRRC49-221ENST00000560107 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
LRRC49-221ENST00000560107 M0R2T5 61 aa2.08□□□□□ -2.08
LRRC49-221ENST00000560107 MT1FP04733 61 aa2.05□□□□□ -2.08
LRRC49-221ENST00000560107 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
LRRC49-221ENST00000560107 MT2AP02795 61 aa2.04□□□□□ -2.08
LRRC49-221ENST00000560107 MT1HP80294 61 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms