RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 CHD8Q9HCK8 2581 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
CRNDE-208ENST00000560029 SONP18583 2426 aaKnown RBP1.35□□□□□ -2.19
CRNDE-208ENST00000560029 COL6A5A8TX70 2615 aa1.35□□□□□ -2.19
CRNDE-208ENST00000560029 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
CRNDE-208ENST00000560029 RIF1Q5UIP0 2472 aaKnown RBP1.34□□□□□ -2.19
CRNDE-208ENST00000560029 ZFYVE26Q68DK2 2539 aa1.34□□□□□ -2.19
CRNDE-208ENST00000560029 CENPEQ02224 2701 aa1.34□□□□□ -2.2
CRNDE-208ENST00000560029 MTORP42345 2549 aa1.34□□□□□ -2.2
CRNDE-208ENST00000560029 ANK3Q12955 4377 aaKnown RBP1.34□□□□□ -2.2
CRNDE-208ENST00000560029 HIVEP1P15822 2718 aa1.33□□□□□ -2.2
CRNDE-208ENST00000560029 VPS13DQ5THJ4 4388 aa1.33□□□□□ -2.2
CRNDE-208ENST00000560029 TTC28Q96AY4 2481 aa1.32□□□□□ -2.2
CRNDE-208ENST00000560029 EPG5Q9HCE0 2579 aa1.32□□□□□ -2.2
CRNDE-208ENST00000560029 LRRK2Q5S007 2527 aa1.32□□□□□ -2.2
CRNDE-208ENST00000560029 TGP01266 2768 aa1.31□□□□□ -2.2
CRNDE-208ENST00000560029 SRRM2Q9UQ35 2752 aaKnown RBP1.31□□□□□ -2.2
CRNDE-208ENST00000560029 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
CRNDE-208ENST00000560029 MXRA5Q9NR99 2828 aa1.31□□□□□ -2.2
CRNDE-208ENST00000560029 MUC3AQ02505 3323 aa1.31□□□□□ -2.2
CRNDE-208ENST00000560029 CUBNO60494 3623 aa1.3□□□□□ -2.2
CRNDE-208ENST00000560029 NIPBLQ6KC79 2804 aaeCLIP1.3□□□□□ -2.2
CRNDE-208ENST00000560029 PKD1L2Q7Z442 2459 aa1.3□□□□□ -2.2
CRNDE-208ENST00000560029 MEGF8Q7Z7M0 2845 aa1.3□□□□□ -2.2
CRNDE-208ENST00000560029 ITPR3Q14573 2671 aa1.29□□□□□ -2.2
CRNDE-208ENST00000560029 CSMD2Q7Z408 3487 aa1.29□□□□□ -2.2
CRNDE-208ENST00000560029 CFAP46Q8IYW2 2715 aa1.29□□□□□ -2.2
CRNDE-208ENST00000560029 DNAH8Q96JB1 4490 aa1.29□□□□□ -2.2
CRNDE-208ENST00000560029 SETD2Q9BYW2 2564 aaPredicted RBP1.29□□□□□ -2.2
CRNDE-208ENST00000560029 ACANP16112 2415 aa1.28□□□□□ -2.2
CRNDE-208ENST00000560029 PDZD2O15018 2839 aa1.28□□□□□ -2.2
CRNDE-208ENST00000560029 VWFP04275 2813 aa1.28□□□□□ -2.2
CRNDE-208ENST00000560029 FBN2P35556 2912 aa1.27□□□□□ -2.21
CRNDE-208ENST00000560029 SMR3BP02814 79 aaPredicted RBP1.27□□□□□ -2.21
CRNDE-208ENST00000560029 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
CRNDE-208ENST00000560029 ZNF292O60281 2723 aa1.27□□□□□ -2.21
CRNDE-208ENST00000560029 FRAS1Q86XX4 4008 aa1.27□□□□□ -2.21
CRNDE-208ENST00000560029 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 FLNAP21333 2647 aaKnown RBP1.26□□□□□ -2.21
CRNDE-208ENST00000560029 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 STAB2Q8WWQ8 2551 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 ZANQ9Y493 2812 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
CRNDE-208ENST00000560029 POLQO75417 2590 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 ANK2Q01484 3957 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 ACACBO00763 2458 aa1.26□□□□□ -2.21
CRNDE-208ENST00000560029 DNAH10Q8IVF4 4471 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 BDP1A6H8Y1 2624 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 MAST4O15021 2626 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 TENM3Q9P273 2699 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 FAM208BQ5VWN6 2430 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 CMYA5Q8N3K9 4069 aa1.25□□□□□ -2.21
CRNDE-208ENST00000560029 DYNC2H1Q8NCM8 4307 aaKnown RBP1.24□□□□□ -2.21
CRNDE-208ENST00000560029 TRRAPQ9Y4A5 3859 aa1.24□□□□□ -2.21
CRNDE-208ENST00000560029 DNAH17Q9UFH2 4485 aa1.24□□□□□ -2.21
CRNDE-208ENST00000560029 NBEAL1Q6ZS30 2694 aa1.24□□□□□ -2.21
CRNDE-208ENST00000560029 CACNA1AO00555 2505 aa1.24□□□□□ -2.21
CRNDE-208ENST00000560029 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
CRNDE-208ENST00000560029 FASNP49327 2511 aaKnown RBP1.23□□□□□ -2.21
CRNDE-208ENST00000560029 DMBT1Q9UGM3 2413 aaPredicted RBP1.23□□□□□ -2.21
CRNDE-208ENST00000560029 PKD1L1Q8TDX9 2849 aa1.22□□□□□ -2.21
CRNDE-208ENST00000560029 MYO18BQ8IUG5 2567 aa1.22□□□□□ -2.21
CRNDE-208ENST00000560029 PRKDCP78527 4128 aaKnown RBP1.22□□□□□ -2.21
CRNDE-208ENST00000560029 MYCBP2O75592 4640 aa1.22□□□□□ -2.21
CRNDE-208ENST00000560029 LYSTQ99698 3801 aa1.21□□□□□ -2.22
CRNDE-208ENST00000560029 HUWE1Q7Z6Z7 4374 aaKnown RBP1.21□□□□□ -2.22
CRNDE-208ENST00000560029 TEP1Q99973 2627 aaKnown RBP1.2□□□□□ -2.22
CRNDE-208ENST00000560029 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
CRNDE-208ENST00000560029 DNAH6Q9C0G6 4158 aa1.2□□□□□ -2.22
CRNDE-208ENST00000560029 FLNBO75369 2602 aaKnown RBP1.19□□□□□ -2.22
CRNDE-208ENST00000560029 DNAH11Q96DT5 4516 aa1.19□□□□□ -2.22
CRNDE-208ENST00000560029 NSD1Q96L73 2696 aaPredicted RBP1.19□□□□□ -2.22
CRNDE-208ENST00000560029 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
CRNDE-208ENST00000560029 DNAH7Q8WXX0 4024 aa1.18□□□□□ -2.22
CRNDE-208ENST00000560029 DNAH2Q9P225 4427 aa1.18□□□□□ -2.22
CRNDE-208ENST00000560029 IGSF10Q6WRI0 2623 aa1.18□□□□□ -2.22
CRNDE-208ENST00000560029 ITPR2Q14571 2701 aa1.18□□□□□ -2.22
CRNDE-208ENST00000560029 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
CRNDE-208ENST00000560029 ATRQ13535 2644 aa1.17□□□□□ -2.22
CRNDE-208ENST00000560029 USP24Q9UPU5 2620 aa1.17□□□□□ -2.22
CRNDE-208ENST00000560029 MGAM2Q2M2H8 2515 aa1.16□□□□□ -2.22
CRNDE-208ENST00000560029 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
CRNDE-208ENST00000560029 FLNCQ14315 2725 aa1.16□□□□□ -2.22
CRNDE-208ENST00000560029 HECTD4Q9Y4D8 3996 aa1.15□□□□□ -2.23
CRNDE-208ENST00000560029 STAB1Q9NY15 2570 aa1.14□□□□□ -2.23
CRNDE-208ENST00000560029 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
CRNDE-208ENST00000560029 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
CRNDE-208ENST00000560029 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
CRNDE-208ENST00000560029 M0R2T5 61 aa1.12□□□□□ -2.23
CRNDE-208ENST00000560029 STARD9Q9P2P6 4700 aa1.11□□□□□ -2.23
CRNDE-208ENST00000560029 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
CRNDE-208ENST00000560029 APOBP04114 4563 aaKnown RBP1.1□□□□□ -2.23
CRNDE-208ENST00000560029 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
CRNDE-208ENST00000560029 PKHD1P08F94 4074 aa1.09□□□□□ -2.23
CRNDE-208ENST00000560029 PLECQ15149 4684 aaKnown RBP1.09□□□□□ -2.24
CRNDE-208ENST00000560029 DNAH5Q8TE73 4624 aa1.08□□□□□ -2.24
CRNDE-208ENST00000560029 LRP1BQ9NZR2 4599 aa1.08□□□□□ -2.24
CRNDE-208ENST00000560029 TNXBP22105 4242 aa1.07□□□□□ -2.24
CRNDE-208ENST00000560029 MT1HL1P0DM35 61 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms