RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
PSMA4-215ENST00000559934 RPL37P61927 97 aaKnown RBP11.29□□□□□ -0.6
PSMA4-215ENST00000559934 P0C880 135 aa11.27□□□□□ -0.61
PSMA4-215ENST00000559934 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
PSMA4-215ENST00000559934 TPRXLQ17RH7 258 aa11.2□□□□□ -0.62
PSMA4-215ENST00000559934 FAT3Q8TDW7 4589 aa11.15□□□□□ -0.62
PSMA4-215ENST00000559934 HSPG2P98160 4391 aa11.15□□□□□ -0.63
PSMA4-215ENST00000559934 KRTAP10-8P60410 259 aa11.14□□□□□ -0.63
PSMA4-215ENST00000559934 C10orf95Q9H7T3 257 aa11.13□□□□□ -0.63
PSMA4-215ENST00000559934 S4R3F8 94 aa11.09□□□□□ -0.63
PSMA4-215ENST00000559934 A0A1B0GVY2 172 aa11.08□□□□□ -0.64
PSMA4-215ENST00000559934 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
PSMA4-215ENST00000559934 SPINT4Q6UDR6 99 aa11.07□□□□□ -0.64
PSMA4-215ENST00000559934 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
PSMA4-215ENST00000559934 TNXBP22105 4242 aa11□□□□□ -0.65
PSMA4-215ENST00000559934 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
PSMA4-215ENST00000559934 KRTAP12-2P59991 146 aa10.99□□□□□ -0.65
PSMA4-215ENST00000559934 XP32Q5T750 250 aa10.95□□□□□ -0.66
PSMA4-215ENST00000559934 KRTAP12-1P59990 96 aa10.85□□□□□ -0.67
PSMA4-215ENST00000559934 KRTAP15-1Q3LI76 137 aa10.83□□□□□ -0.68
PSMA4-215ENST00000559934 NDUFAF8A1L188 74 aa10.77□□□□□ -0.69
PSMA4-215ENST00000559934 RYR2Q92736 4967 aa10.76□□□□□ -0.69
PSMA4-215ENST00000559934 LPAP08519 4548 aa10.73□□□□□ -0.69
PSMA4-215ENST00000559934 KMT2CQ8NEZ4 4911 aaKnown RBP10.67□□□□□ -0.7
PSMA4-215ENST00000559934 Q5VSD8 79 aa10.67□□□□□ -0.7
PSMA4-215ENST00000559934 M0QZ58 72 aa10.58□□□□□ -0.72
PSMA4-215ENST00000559934 LRP2P98164 4655 aa10.55□□□□□ -0.72
PSMA4-215ENST00000559934 KRTAP17-1Q9BYP8 105 aa10.54□□□□□ -0.72
PSMA4-215ENST00000559934 MT1HL1P0DM35 61 aa10.46□□□□□ -0.73
PSMA4-215ENST00000559934 RYR1P21817 5038 aa10.42□□□□□ -0.74
PSMA4-215ENST00000559934 R4GN34 69 aa10.33□□□□□ -0.76
PSMA4-215ENST00000559934 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
PSMA4-215ENST00000559934 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
PSMA4-215ENST00000559934 RYR3Q15413 4870 aa10.24□□□□□ -0.77
PSMA4-215ENST00000559934 PLAC4Q8WY50 150 aa10.16□□□□□ -0.78
PSMA4-215ENST00000559934 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
PSMA4-215ENST00000559934 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
PSMA4-215ENST00000559934 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
PSMA4-215ENST00000559934 SEC61BP60468 96 aaKnown RBP9.87□□□□□ -0.83
PSMA4-215ENST00000559934 CAMK2N1Q7Z7J9 78 aa9.87□□□□□ -0.83
PSMA4-215ENST00000559934 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
PSMA4-215ENST00000559934 KRTAP4-5Q9BYR2 181 aa9.82□□□□□ -0.84
PSMA4-215ENST00000559934 PP632Q6XCG6 107 aa9.8□□□□□ -0.84
PSMA4-215ENST00000559934 KRTAP19-2Q3LHN2 52 aa9.76□□□□□ -0.85
PSMA4-215ENST00000559934 LUZP6Q538Z0 58 aa9.74□□□□□ -0.85
PSMA4-215ENST00000559934 MUC2Q02817 5179 aa9.57□□□□□ -0.88
PSMA4-215ENST00000559934 A0A0A0MQY5 61 aa9.49□□□□□ -0.89
PSMA4-215ENST00000559934 TNP1P09430 55 aa9.49□□□□□ -0.89
PSMA4-215ENST00000559934 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
PSMA4-215ENST00000559934 J3QL48 77 aa9.44□□□□□ -0.9
PSMA4-215ENST00000559934 SPRR5A0A1B0GTR4 108 aa9.35□□□□□ -0.91
PSMA4-215ENST00000559934 KRTAP23-1A1A580 65 aa9.33□□□□□ -0.92
PSMA4-215ENST00000559934 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
PSMA4-215ENST00000559934 HERC2O95714 4834 aa9.32□□□□□ -0.92
PSMA4-215ENST00000559934 HERC1Q15751 4861 aa9.31□□□□□ -0.92
PSMA4-215ENST00000559934 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
PSMA4-215ENST00000559934 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
PSMA4-215ENST00000559934 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
PSMA4-215ENST00000559934 SPRR2GQ9BYE4 73 aa9.05□□□□□ -0.96
PSMA4-215ENST00000559934 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
PSMA4-215ENST00000559934 LCE2CQ5TA81 110 aa9□□□□□ -0.97
PSMA4-215ENST00000559934 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
PSMA4-215ENST00000559934 M0R2T5 61 aa8.83□□□□□ -1
PSMA4-215ENST00000559934 MT1FP04733 61 aa8.75□□□□□ -1.01
PSMA4-215ENST00000559934 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
PSMA4-215ENST00000559934 KRTAP8-1Q8IUC2 63 aa8.72□□□□□ -1.01
PSMA4-215ENST00000559934 MT1HP80294 61 aa8.71□□□□□ -1.01
PSMA4-215ENST00000559934 MT2AP02795 61 aa8.7□□□□□ -1.02
PSMA4-215ENST00000559934 UBR4Q5T4S7 5183 aa8.7□□□□□ -1.02
PSMA4-215ENST00000559934 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
PSMA4-215ENST00000559934 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
PSMA4-215ENST00000559934 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
PSMA4-215ENST00000559934 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
PSMA4-215ENST00000559934 MT1XP80297 61 aa8.56□□□□□ -1.04
PSMA4-215ENST00000559934 KRTAP19-8Q3LI54 63 aa8.56□□□□□ -1.04
PSMA4-215ENST00000559934 KRTAP12-3P60328 96 aa8.54□□□□□ -1.04
PSMA4-215ENST00000559934 MT1BP07438 61 aa8.52□□□□□ -1.04
PSMA4-215ENST00000559934 KRTAP10-12P60413 245 aa8.5□□□□□ -1.05
PSMA4-215ENST00000559934 INE1O15225 51 aa8.47□□□□□ -1.05
PSMA4-215ENST00000559934 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
PSMA4-215ENST00000559934 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
PSMA4-215ENST00000559934 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
PSMA4-215ENST00000559934 LCE3CQ5T5A8 94 aa8.06□□□□□ -1.12
PSMA4-215ENST00000559934 KMT2DO14686 5537 aa7.99□□□□□ -1.13
PSMA4-215ENST00000559934 KRTAP9-6A8MVA2 160 aa7.9□□□□□ -1.14
PSMA4-215ENST00000559934 USH2AO75445 5202 aa7.87□□□□□ -1.15
PSMA4-215ENST00000559934 LCE2BO14633 110 aa7.86□□□□□ -1.15
PSMA4-215ENST00000559934 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
PSMA4-215ENST00000559934 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
PSMA4-215ENST00000559934 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
PSMA4-215ENST00000559934 KRTAP2-3P0C7H8 128 aa7.65□□□□□ -1.18
PSMA4-215ENST00000559934 KRTAP2-4Q9BYR9 128 aa7.65□□□□□ -1.18
PSMA4-215ENST00000559934 KRTAP2-1Q9BYU5 128 aa7.65□□□□□ -1.18
PSMA4-215ENST00000559934 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
PSMA4-215ENST00000559934 MT1LQ93083 61 aa7.42□□□□□ -1.22
PSMA4-215ENST00000559934 MT1EP04732 61 aa7.35□□□□□ -1.23
PSMA4-215ENST00000559934 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
PSMA4-215ENST00000559934 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
PSMA4-215ENST00000559934 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
PSMA4-215ENST00000559934 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms