RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ALS2Q96Q42 1657 aa-0.37□□□□□ -2.47
GABPB1-209ENST00000559100 PRXQ9BXM0 1461 aa-0.37□□□□□ -2.47
GABPB1-209ENST00000559100 ITPR1Q14643 2758 aa-0.38□□□□□ -2.47
GABPB1-209ENST00000559100 M0QZ58 72 aa-0.38□□□□□ -2.47
GABPB1-209ENST00000559100 MT4P47944 62 aa-0.38□□□□□ -2.47
GABPB1-209ENST00000559100 USP9XQ93008 2570 aaPredicted RBP-0.39□□□□□ -2.47
GABPB1-209ENST00000559100 TLN2Q9Y4G6 2542 aa-0.39□□□□□ -2.47
GABPB1-209ENST00000559100 A8MTW9 85 aa-0.39□□□□□ -2.47
GABPB1-209ENST00000559100 PLNP26678 52 aa-0.39□□□□□ -2.47
GABPB1-209ENST00000559100 DNAH8Q96JB1 4490 aa-0.39□□□□□ -2.47
GABPB1-209ENST00000559100 CELSR3Q9NYQ7 3312 aa-0.4□□□□□ -2.47
GABPB1-209ENST00000559100 HERC2O95714 4834 aa-0.4□□□□□ -2.47
GABPB1-209ENST00000559100 MAST1Q9Y2H9 1570 aa-0.4□□□□□ -2.47
GABPB1-209ENST00000559100 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.41□□□□□ -2.47
GABPB1-209ENST00000559100 ERICH3Q5RHP9 1530 aa-0.41□□□□□ -2.48
GABPB1-209ENST00000559100 C5orf42Q9H799 3197 aa-0.41□□□□□ -2.48
GABPB1-209ENST00000559100 TEX15Q9BXT5 2789 aa-0.42□□□□□ -2.48
GABPB1-209ENST00000559100 FAM208AQ9UK61 1670 aaKnown RBP-0.43□□□□□ -2.48
GABPB1-209ENST00000559100 MT1HP80294 61 aa-0.43□□□□□ -2.48
GABPB1-209ENST00000559100 KRTAP19-5Q3LI72 72 aa-0.43□□□□□ -2.48
GABPB1-209ENST00000559100 EPPK1P58107 5090 aaKnown RBP-0.44□□□□□ -2.48
GABPB1-209ENST00000559100 PREX2Q70Z35 1606 aa-0.44□□□□□ -2.48
GABPB1-209ENST00000559100 SPART-AS1P0CW21 52 aa-0.44□□□□□ -2.48
GABPB1-209ENST00000559100 SMR3BP02814 79 aaPredicted RBP-0.45□□□□□ -2.48
GABPB1-209ENST00000559100 TFF3Q07654 80 aa-0.45□□□□□ -2.48
GABPB1-209ENST00000559100 AGLP35573 1532 aa-0.45□□□□□ -2.48
GABPB1-209ENST00000559100 COL6A5A8TX70 2615 aa-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 KRTAP8-1Q8IUC2 63 aa-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 ADGRG4Q8IZF6 3080 aa-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 PLECQ15149 4684 aaKnown RBP-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 SRCAPQ6ZRS2 3230 aa-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 KIF21BO75037 1637 aa-0.46□□□□□ -2.48
GABPB1-209ENST00000559100 CMYA5Q8N3K9 4069 aa-0.47□□□□□ -2.48
GABPB1-209ENST00000559100 LINC01546A6NGU7 62 aa-0.47□□□□□ -2.48
GABPB1-209ENST00000559100 LMO7Q8WWI1 1683 aa-0.47□□□□□ -2.48
GABPB1-209ENST00000559100 DNAH7Q8WXX0 4024 aa-0.48□□□□□ -2.49
GABPB1-209ENST00000559100 LAMA3Q16787 3333 aa-0.48□□□□□ -2.49
GABPB1-209ENST00000559100 CHD7Q9P2D1 2997 aa-0.48□□□□□ -2.49
GABPB1-209ENST00000559100 DEFB131AP59861 70 aa-0.48□□□□□ -2.49
GABPB1-209ENST00000559100 CMC2Q9NRP2 79 aa-0.48□□□□□ -2.49
GABPB1-209ENST00000559100 MROH2AA6NES4 1674 aa-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 NIPBLQ6KC79 2804 aaeCLIP-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 SPTAN1Q13813 2472 aaKnown RBP-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 SMIM2Q9BVW6 85 aa-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 SYCP2Q9BX26 1530 aa-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 ADCY10Q96PN6 1610 aa-0.49□□□□□ -2.49
GABPB1-209ENST00000559100 CSMD1Q96PZ7 3565 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 LRBAP50851 2863 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 MGAQ8IWI9 3026 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 LAMA2P24043 3122 aaKnown RBP-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 ABCA5Q8WWZ7 1642 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 RYR1P21817 5038 aa-0.5□□□□□ -2.49
GABPB1-209ENST00000559100 DNHD1Q96M86 4753 aa-0.52□□□□□ -2.49
GABPB1-209ENST00000559100 ABCC8Q09428 1581 aa-0.52□□□□□ -2.49
GABPB1-209ENST00000559100 POLR2KP53803 58 aaKnown RBP-0.52□□□□□ -2.49
GABPB1-209ENST00000559100 DOPEY1Q5JWR5 2465 aa-0.54□□□□□ -2.5
GABPB1-209ENST00000559100 DYNC1H1Q14204 4646 aaKnown RBP-0.54□□□□□ -2.5
GABPB1-209ENST00000559100 NEBP20929 6669 aa-0.54□□□□□ -2.5
GABPB1-209ENST00000559100 NRXN3Q9Y4C0 1643 aa-0.54□□□□□ -2.5
GABPB1-209ENST00000559100 ZFHX4Q86UP3 3567 aa-0.54□□□□□ -2.5
GABPB1-209ENST00000559100 DNAH10Q8IVF4 4471 aa-0.55□□□□□ -2.5
GABPB1-209ENST00000559100 MYO9AB2RTY4 2548 aa-0.55□□□□□ -2.5
GABPB1-209ENST00000559100 DDX60Q8IY21 1712 aaKnown RBP-0.56□□□□□ -2.5
GABPB1-209ENST00000559100 FANCD2Q9BXW9 1451 aa-0.56□□□□□ -2.5
GABPB1-209ENST00000559100 HYDINQ4G0P3 5121 aa-0.56□□□□□ -2.5
GABPB1-209ENST00000559100 DNAH17Q9UFH2 4485 aa-0.56□□□□□ -2.5
GABPB1-209ENST00000559100 MT1EP04732 61 aa-0.57□□□□□ -2.5
GABPB1-209ENST00000559100 MT1XP80297 61 aa-0.57□□□□□ -2.5
GABPB1-209ENST00000559100 IQGAP1P46940 1657 aa-0.57□□□□□ -2.5
GABPB1-209ENST00000559100 RNF213Q63HN8 5207 aa-0.58□□□□□ -2.5
GABPB1-209ENST00000559100 CFAP46Q8IYW2 2715 aa-0.59□□□□□ -2.5
GABPB1-209ENST00000559100 CRYBG3Q68DQ2 2970 aa-0.59□□□□□ -2.5
GABPB1-209ENST00000559100 SNRPGP15A8MWD9 76 aa-0.6□□□□□ -2.51
GABPB1-209ENST00000559100 EYSQ5T1H1 3165 aa-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 NDUFA1O15239 70 aa-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 TRPM2O94759 1503 aa-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 SMG1Q96Q15 3661 aaKnown RBP-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 CEP295Q9C0D2 2601 aa-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 TRRAPQ9Y4A5 3859 aa-0.61□□□□□ -2.51
GABPB1-209ENST00000559100 CLTCL1P53675 1640 aa-0.62□□□□□ -2.51
GABPB1-209ENST00000559100 MT1LQ93083 61 aa-0.62□□□□□ -2.51
GABPB1-209ENST00000559100 LEAP2Q969E1 77 aa-0.62□□□□□ -2.51
GABPB1-209ENST00000559100 NFAT5O94916 1531 aa-0.63□□□□□ -2.51
GABPB1-209ENST00000559100 CSMD2Q7Z408 3487 aa-0.63□□□□□ -2.51
GABPB1-209ENST00000559100 RYR3Q15413 4870 aa-0.65□□□□□ -2.51
GABPB1-209ENST00000559100 DMXL2Q8TDJ6 3036 aa-0.66□□□□□ -2.51
GABPB1-209ENST00000559100 ITPR2Q14571 2701 aa-0.67□□□□□ -2.52
GABPB1-209ENST00000559100 RYR2Q92736 4967 aa-0.67□□□□□ -2.52
GABPB1-209ENST00000559100 PRUNE2Q8WUY3 3088 aa-0.68□□□□□ -2.52
GABPB1-209ENST00000559100 CFAP54Q96N23 3096 aa-0.68□□□□□ -2.52
GABPB1-209ENST00000559100 KIAA1109Q2LD37 5005 aa-0.69□□□□□ -2.52
GABPB1-209ENST00000559100 DEFB4AO15263 64 aa-0.69□□□□□ -2.52
GABPB1-209ENST00000559100 DNAH5Q8TE73 4624 aa-0.69□□□□□ -2.52
GABPB1-209ENST00000559100 MT1HL1P0DM35 61 aa-0.7□□□□□ -2.52
GABPB1-209ENST00000559100 MT1GP13640 62 aa-0.7□□□□□ -2.52
GABPB1-209ENST00000559100 DEFB136Q30KP8 78 aa-0.7□□□□□ -2.52
GABPB1-209ENST00000559100 TOMM5Q8N4H5 51 aa-0.72□□□□□ -2.52
GABPB1-209ENST00000559100 TOMM7Q9P0U1 55 aa-0.73□□□□□ -2.53
GABPB1-209ENST00000559100 VPS13CQ709C8 3753 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms