RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
CPNE6-210ENST00000558995 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
CPNE6-210ENST00000558995 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
CPNE6-210ENST00000558995 TNXBP22105 4242 aa7.25□□□□□ -1.25
CPNE6-210ENST00000558995 Q5VSD8 79 aa7.25□□□□□ -1.25
CPNE6-210ENST00000558995 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
CPNE6-210ENST00000558995 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
CPNE6-210ENST00000558995 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
CPNE6-210ENST00000558995 FAT3Q8TDW7 4589 aa7.22□□□□□ -1.25
CPNE6-210ENST00000558995 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
CPNE6-210ENST00000558995 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
CPNE6-210ENST00000558995 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
CPNE6-210ENST00000558995 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
CPNE6-210ENST00000558995 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
CPNE6-210ENST00000558995 H0YAA0 97 aa7.1□□□□□ -1.27
CPNE6-210ENST00000558995 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
CPNE6-210ENST00000558995 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
CPNE6-210ENST00000558995 K7ERS5 55 aa7.04□□□□□ -1.28
CPNE6-210ENST00000558995 A0A1B0GU33 70 aa7.02□□□□□ -1.29
CPNE6-210ENST00000558995 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
CPNE6-210ENST00000558995 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
CPNE6-210ENST00000558995 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
CPNE6-210ENST00000558995 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
CPNE6-210ENST00000558995 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
CPNE6-210ENST00000558995 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
CPNE6-210ENST00000558995 XP32Q5T750 250 aa6.89□□□□□ -1.31
CPNE6-210ENST00000558995 LRP2P98164 4655 aa6.88□□□□□ -1.31
CPNE6-210ENST00000558995 LPAP08519 4548 aa6.87□□□□□ -1.31
CPNE6-210ENST00000558995 HERC2O95714 4834 aa6.86□□□□□ -1.31
CPNE6-210ENST00000558995 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
CPNE6-210ENST00000558995 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
CPNE6-210ENST00000558995 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
CPNE6-210ENST00000558995 S4R3F8 94 aa6.8□□□□□ -1.32
CPNE6-210ENST00000558995 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
CPNE6-210ENST00000558995 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
CPNE6-210ENST00000558995 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
CPNE6-210ENST00000558995 J3QL48 77 aa6.69□□□□□ -1.34
CPNE6-210ENST00000558995 A0A0D9SG42 100 aa6.64□□□□□ -1.35
CPNE6-210ENST00000558995 HERC1Q15751 4861 aa6.59□□□□□ -1.35
CPNE6-210ENST00000558995 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
CPNE6-210ENST00000558995 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
CPNE6-210ENST00000558995 MUC2Q02817 5179 aa6.49□□□□□ -1.37
CPNE6-210ENST00000558995 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
CPNE6-210ENST00000558995 M0QZ58 72 aa6.49□□□□□ -1.37
CPNE6-210ENST00000558995 KRTAP12-1P59990 96 aa6.46□□□□□ -1.37
CPNE6-210ENST00000558995 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.38
CPNE6-210ENST00000558995 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
CPNE6-210ENST00000558995 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
CPNE6-210ENST00000558995 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CPNE6-210ENST00000558995 R4GN34 69 aa6.3□□□□□ -1.4
CPNE6-210ENST00000558995 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
CPNE6-210ENST00000558995 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
CPNE6-210ENST00000558995 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.42
CPNE6-210ENST00000558995 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
CPNE6-210ENST00000558995 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
CPNE6-210ENST00000558995 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
CPNE6-210ENST00000558995 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
CPNE6-210ENST00000558995 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
CPNE6-210ENST00000558995 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
CPNE6-210ENST00000558995 MT1HP80294 61 aa5.89□□□□□ -1.47
CPNE6-210ENST00000558995 M0R2T5 61 aa5.87□□□□□ -1.47
CPNE6-210ENST00000558995 INE1O15225 51 aa5.79□□□□□ -1.48
CPNE6-210ENST00000558995 TNP1P09430 55 aa5.77□□□□□ -1.49
CPNE6-210ENST00000558995 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
CPNE6-210ENST00000558995 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CPNE6-210ENST00000558995 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
CPNE6-210ENST00000558995 MT2AP02795 61 aa5.72□□□□□ -1.49
CPNE6-210ENST00000558995 MT1FP04733 61 aa5.72□□□□□ -1.49
CPNE6-210ENST00000558995 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
CPNE6-210ENST00000558995 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
CPNE6-210ENST00000558995 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
CPNE6-210ENST00000558995 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
CPNE6-210ENST00000558995 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
CPNE6-210ENST00000558995 MT1BP07438 61 aa5.45□□□□□ -1.54
CPNE6-210ENST00000558995 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
CPNE6-210ENST00000558995 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
CPNE6-210ENST00000558995 USH2AO75445 5202 aa5.4□□□□□ -1.54
CPNE6-210ENST00000558995 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
CPNE6-210ENST00000558995 MT1XP80297 61 aa5.35□□□□□ -1.55
CPNE6-210ENST00000558995 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
CPNE6-210ENST00000558995 LCE2BO14633 110 aa5.33□□□□□ -1.56
CPNE6-210ENST00000558995 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
CPNE6-210ENST00000558995 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
CPNE6-210ENST00000558995 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
CPNE6-210ENST00000558995 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
CPNE6-210ENST00000558995 KMT2DO14686 5537 aa5.12□□□□□ -1.59
CPNE6-210ENST00000558995 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
CPNE6-210ENST00000558995 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
CPNE6-210ENST00000558995 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
CPNE6-210ENST00000558995 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
CPNE6-210ENST00000558995 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
CPNE6-210ENST00000558995 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
CPNE6-210ENST00000558995 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
CPNE6-210ENST00000558995 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
CPNE6-210ENST00000558995 LCE2DQ5TA82 110 aaPredicted RBP4.75□□□□□ -1.65
CPNE6-210ENST00000558995 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
CPNE6-210ENST00000558995 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
CPNE6-210ENST00000558995 MT1EP04732 61 aa4.64□□□□□ -1.67
CPNE6-210ENST00000558995 MT1LQ93083 61 aa4.64□□□□□ -1.67
CPNE6-210ENST00000558995 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms